RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 ZNF806P0C7X5 589 aa8.43□□□□□ -1.06
NEK3-209ENST00000618856 RARAP10276 462 aa8.43□□□□□ -1.06
NEK3-209ENST00000618856 GOT1P17174 413 aa8.43□□□□□ -1.06
NEK3-209ENST00000618856 C5AR1P21730 350 aa8.43□□□□□ -1.06
NEK3-209ENST00000618856 DRD3P35462 400 aa8.43□□□□□ -1.06
NEK3-209ENST00000618856 NNMTP40261 264 aa8.43□□□□□ -1.06
NEK3-209ENST00000618856 ARHGAP25P42331 645 aa8.43□□□□□ -1.06
NEK3-209ENST00000618856 SERINC3Q13530 473 aa8.43□□□□□ -1.06
NEK3-209ENST00000618856 POLD3Q15054 466 aaPredicted RBP8.43□□□□□ -1.06
NEK3-209ENST00000618856 CST6Q15828 149 aa8.43□□□□□ -1.06
NEK3-209ENST00000618856 LPAL2Q16609 132 aa8.43□□□□□ -1.06
NEK3-209ENST00000618856 INO80DQ53TQ3 878 aaPredicted RBP8.43□□□□□ -1.06
NEK3-209ENST00000618856 KCNT1Q5JUK3 1230 aa8.43□□□□□ -1.06
NEK3-209ENST00000618856 RETSATQ6NUM9 610 aa8.43□□□□□ -1.06
NEK3-209ENST00000618856 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.43□□□□□ -1.06
NEK3-209ENST00000618856 CPNE8Q86YQ8 564 aa8.43□□□□□ -1.06
NEK3-209ENST00000618856 SLC41A1Q8IVJ1 513 aa8.43□□□□□ -1.06
NEK3-209ENST00000618856 RHOT2Q8IXI1 618 aa8.43□□□□□ -1.06
NEK3-209ENST00000618856 ABCA7Q8IZY2 2146 aa8.43□□□□□ -1.06
NEK3-209ENST00000618856 STK40Q8N2I9 435 aa8.43□□□□□ -1.06
NEK3-209ENST00000618856 AADATQ8N5Z0 425 aa8.43□□□□□ -1.06
NEK3-209ENST00000618856 TMIEQ8NEW7 156 aa8.43□□□□□ -1.06
NEK3-209ENST00000618856 C1orf216Q8TAB5 229 aa8.43□□□□□ -1.06
NEK3-209ENST00000618856 SLC35G2Q8TBE7 412 aa8.43□□□□□ -1.06
NEK3-209ENST00000618856 CASKIN2Q8WXE0 1202 aa8.43□□□□□ -1.06
NEK3-209ENST00000618856 FAF2Q96CS3 445 aa8.43□□□□□ -1.06
NEK3-209ENST00000618856 TOE1Q96GM8 510 aaKnown RBP8.43□□□□□ -1.06
NEK3-209ENST00000618856 ORAI3Q9BRQ5 295 aa8.43□□□□□ -1.06
NEK3-209ENST00000618856 DEF6Q9H4E7 631 aa8.43□□□□□ -1.06
NEK3-209ENST00000618856 DHX35Q9H5Z1 703 aaKnown RBP8.43□□□□□ -1.06
NEK3-209ENST00000618856 SGK2Q9HBY8 427 aa8.43□□□□□ -1.06
NEK3-209ENST00000618856 ATP13A1Q9HD20 1204 aa8.43□□□□□ -1.06
NEK3-209ENST00000618856 OSGEPQ9NPF4 335 aa8.43□□□□□ -1.06
NEK3-209ENST00000618856 SEMA4GQ9NTN9 838 aa8.43□□□□□ -1.06
NEK3-209ENST00000618856 GPATCH2LQ9NWQ4 482 aa8.43□□□□□ -1.06
NEK3-209ENST00000618856 DONSONQ9NYP3 566 aa8.43□□□□□ -1.06
NEK3-209ENST00000618856 IMPACTQ9P2X3 320 aa8.43□□□□□ -1.06
NEK3-209ENST00000618856 DNAI1Q9UI46 699 aa8.43□□□□□ -1.06
NEK3-209ENST00000618856 SLC25A13Q9UJS0 675 aa8.43□□□□□ -1.06
NEK3-209ENST00000618856 GMEB2Q9UKD1 530 aa8.43□□□□□ -1.06
NEK3-209ENST00000618856 SARDHQ9UL12 918 aa8.43□□□□□ -1.06
NEK3-209ENST00000618856 FZD4Q9ULV1 537 aa8.43□□□□□ -1.06
NEK3-209ENST00000618856 CYP8B1Q9UNU6 501 aa8.43□□□□□ -1.06
NEK3-209ENST00000618856 SPTBN4Q9H254 2564 aa8.43□□□□□ -1.06
NEK3-209ENST00000618856 PTPRZ1P23471 2315 aaPredicted RBP8.42□□□□□ -1.06
NEK3-209ENST00000618856 CEP250Q9BV73 2442 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 CACNA1AO00555 2505 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 A0A0A6YYK5 440 aaPredicted RBP8.42□□□□□ -1.06
NEK3-209ENST00000618856 METTL12A8MUP2 240 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 ZNF487B1APH4 448 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 RASA4BC9J798 803 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 RNF103O00237 685 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 CBX4O00257 560 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 EEF2KO00418 725 aaKnown RBP8.42□□□□□ -1.06
NEK3-209ENST00000618856 MID1O15344 667 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 SLC7A4O43246 635 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 RASA4O43374 803 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 CREB3O43889 395 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 DNTTP04053 509 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 CTSLP07711 333 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 ERCC2P18074 760 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 SLC8A1P32418 973 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 ACSL1P33121 698 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 MPLP40238 635 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 DPP6P42658 865 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 GEMIN4P57678 1058 aaKnown RBP8.42□□□□□ -1.06
NEK3-209ENST00000618856 TAS2R40P59535 323 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 TPI1P60174 286 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 RPL6Q02878 288 aaKnown RBP8.42□□□□□ -1.06
NEK3-209ENST00000618856 ZNF33AQ06730 810 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 SPEM2Q0P670 501 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 LRRC38Q5VT99 294 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 C22orf39Q6P5X5 142 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 SLC23A3Q6PIS1 610 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 KIAA1324Q6UXG2 1013 aaKnown RBP8.42□□□□□ -1.06
NEK3-209ENST00000618856 LINGO4Q6UY18 593 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 Q6ZVU0 165 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 VSIG1Q86XK7 387 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 TMTC1Q8IUR5 882 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 TMEFF1Q8IYR6 380 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 LZTR1Q8N653 840 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 PCDH20Q8N6Y1 951 aaKnown RBP8.42□□□□□ -1.06
NEK3-209ENST00000618856 NPWQ8N729 165 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 ATP11CQ8NB49 1132 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 RFFLQ8WZ73 363 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 FOXJ1Q92949 421 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 ERLEC1Q96DZ1 483 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 CSPG4P5Q96PW8 444 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 SPON2Q9BUD6 331 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 ARRDC1-AS1Q9H2J1 176 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 PCDH18Q9HCL0 1135 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 VPS45Q9NRW7 570 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.42□□□□□ -1.06
NEK3-209ENST00000618856 TMEM74BQ9NUR3 256 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 CTTNBP2NLQ9P2B4 639 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 NCDNQ9UBB6 729 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 SERGEFQ9UGK8 458 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 EVLQ9UI08 416 aaPredicted RBP8.42□□□□□ -1.06
NEK3-209ENST00000618856 REXO2Q9Y3B8 237 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms