RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 SPRY4Q9C004 299 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 LRRN3Q9H3W5 708 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 ASNSD1Q9NWL6 643 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 ZFR2Q9UPR6 939 aaKnown RBP4.7□□□□□ -1.66
SNCA-213ENST00000618500 LOXL2Q9Y4K0 774 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 CFAP69A5D8W1 941 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 M0QYT0 321 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 PMM2O15305 246 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 ZW10O43264 779 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 STX10O60499 249 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 PHACTR2O75167 634 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 MAP4P27816 1152 aaKnown RBP4.7□□□□□ -1.66
SNCA-213ENST00000618500 ADORA2BP29275 332 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 NEK4P51957 841 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 FOSBP53539 338 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 RAB15P59190 212 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 C1orf220Q5T0J3 134 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 PPP1R26Q5T8A7 1209 aaPredicted RBP4.7□□□□□ -1.66
SNCA-213ENST00000618500 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.7□□□□□ -1.66
SNCA-213ENST00000618500 MAMDC2Q7Z304 686 aaPredicted RBP4.7□□□□□ -1.66
SNCA-213ENST00000618500 PARP9Q8IXQ6 854 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 SLC35F3Q8IY50 421 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 SH2D3CQ8N5H7 860 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 SLC4A11Q8NBS3 891 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 GPR156Q8NFN8 814 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 RNF139Q8WU17 664 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 TAAR9Q96RI9 348 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 GFM1Q96RP9 751 aaKnown RBP4.7□□□□□ -1.66
SNCA-213ENST00000618500 TWNKQ96RR1 684 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 PADI4Q9UM07 663 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 PRAMEF33A0A0G2JMD5 474 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 A0A1W2PQU0 124 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 GOLGA6L3A6NEY3 463 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 TCAF2A6NFQ2 919 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 C9orf172C9J069 976 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 PDXKO00764 312 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 PRAMEF10O60809 474 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 RTN2O75298 545 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 PAEPP09466 180 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 MYF5P13349 255 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 BLKP51451 505 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 TBX4P57082 545 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 KNOP1Q1ED39 458 aaKnown RBP4.7□□□□□ -1.66
SNCA-213ENST00000618500 EFHC2Q5JST6 749 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 RABGAP1LQ5R372 815 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 FAM26FQ5R3K3 315 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 PAPD7Q5XG87 772 aaKnown RBP4.7□□□□□ -1.66
SNCA-213ENST00000618500 TCTN3Q6NUS6 607 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 Q6ZSR6 202 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 ERN2Q76MJ5 926 aaKnown RBP4.7□□□□□ -1.66
SNCA-213ENST00000618500 PIGZQ86VD9 579 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 PHACTR4Q8IZ21 702 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 NKD1Q969G9 470 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 ISG20Q96AZ6 181 aaKnown RBP4.7□□□□□ -1.66
SNCA-213ENST00000618500 BTN2A3PQ96KV6 586 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 HSFY1Q96LI6 401 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 KLF6Q99612 283 aaPredicted RBP4.7□□□□□ -1.66
SNCA-213ENST00000618500 PLA2G2EQ9NZK7 142 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 TBC1D30Q9Y2I9 924 aa4.7□□□□□ -1.66
SNCA-213ENST00000618500 DOCK4Q8N1I0 1966 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 ANKRD36A6QL64 1941 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 NUP210LQ5VU65 1888 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 FPGTO14772 594 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 SORBS2O94875 1100 aaKnown RBP4.69□□□□□ -1.66
SNCA-213ENST00000618500 HLA-DRAP01903 254 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 MYL1P05976 194 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 ANXA6P08133 673 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 DLATP10515 647 aaKnown RBP4.69□□□□□ -1.66
SNCA-213ENST00000618500 IDEP14735 1019 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 POU3F2P20265 443 aaPredicted RBP4.69□□□□□ -1.66
SNCA-213ENST00000618500 STAT6P42226 847 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 PIK3CAP42336 1068 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 TKTL1P51854 596 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 NEK3P51956 506 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 RAD23BP54727 409 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 CENPCQ03188 943 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 SLC20A2Q08357 652 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 ABHD18Q0P651 414 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 CDC20Q12834 499 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 CDH18Q13634 790 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 DRAP1Q14919 205 aaPredicted RBP4.69□□□□□ -1.66
SNCA-213ENST00000618500 ELOCQ15369 112 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 DCAF6Q58WW2 860 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 BSPRYQ5W0U4 402 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 CXorf57Q6NSI4 855 aaKnown RBP4.69□□□□□ -1.66
SNCA-213ENST00000618500 TIPARPQ7Z3E1 657 aaKnown RBP4.69□□□□□ -1.66
SNCA-213ENST00000618500 GKN2Q86XP6 184 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 APLFQ8IW19 511 aaPredicted RBP4.69□□□□□ -1.66
SNCA-213ENST00000618500 C12orf29Q8N999 325 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 CCDC112Q8NEF3 446 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 STK32AQ8WU08 396 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 LRRC61Q9BV99 259 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 C1QTNF7Q9BXJ2 289 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 ULBP1Q9BZM6 244 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 IMPG2Q9BZV3 1241 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 TMEM8AQ9HCN3 771 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 PRDM8Q9NQV8 689 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 FAM49BQ9NUQ9 324 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 TRAF3IP3Q9Y228 551 aa4.69□□□□□ -1.66
SNCA-213ENST00000618500 PAXBP1Q9Y5B6 917 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms