RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 ZNF467Q7Z7K2 595 aaPredicted RBP15.23■□□□□ 0.03
COL5A1-208ENST00000618395 PLCZ1Q86YW0 608 aa15.23■□□□□ 0.03
COL5A1-208ENST00000618395 GPR63Q9BZJ6 419 aa15.23■□□□□ 0.03
COL5A1-208ENST00000618395 OR5F1O95221 314 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 ADORA2BP29275 332 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 STILQ15468 1287 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 PLA2G4FQ68DD2 849 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 P2RY8Q86VZ1 359 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 OR4C6Q8NH72 309 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 DNAJC1Q96KC8 554 aaKnown RBP15.22■□□□□ 0.03
COL5A1-208ENST00000618395 SLC39A1Q9NY26 324 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 PCDH10Q9P2E7 1040 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 AGO2Q9UKV8 859 aaKnown RBP15.22■□□□□ 0.03
COL5A1-208ENST00000618395 MAB21L2Q9Y586 359 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 PCDHGA11Q9Y5H2 935 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 MYCP01106 439 aaPredicted RBP15.22■□□□□ 0.03
COL5A1-208ENST00000618395 COX4I1P13073 169 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 ITGA2P17301 1181 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 HPCAL1P37235 193 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 EZH2Q15910 746 aaKnown RBP15.22■□□□□ 0.03
COL5A1-208ENST00000618395 PKN1Q16512 942 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 SSX6Q7RTT6 188 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 FBXO30Q8TB52 745 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 PHF10Q8WUB8 498 aaKnown RBP15.22■□□□□ 0.03
COL5A1-208ENST00000618395 ACTL7BQ9Y614 415 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 A0A087X0T9 212 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 TRIM38O00635 465 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 PGRP06401 933 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 FGRP09769 529 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 RGS6P49758 472 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 RTP1P59025 263 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 ATG4AQ8WYN0 398 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 ST3GAL5Q9UNP4 418 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 MTF2Q9Y483 593 aaPredicted RBP15.22■□□□□ 0.03
COL5A1-208ENST00000618395 CCDC58Q4VC31 144 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 DENND5BQ6ZUT9 1274 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 ERLEC1Q96DZ1 483 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 CLCC1Q96S66 551 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 RASSF1Q9NS23 344 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 GNEQ9Y223 722 aaKnown RBP15.22■□□□□ 0.03
COL5A1-208ENST00000618395 BTDP43251 543 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 PTGES3Q15185 160 aaKnown RBP15.22■□□□□ 0.03
COL5A1-208ENST00000618395 BTBD8Q5XKL5 378 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 STOML3Q8TAV4 291 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 KANSL2Q9H9L4 492 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 FAM217BQ9NTX9 383 aaPredicted RBP15.22■□□□□ 0.03
COL5A1-208ENST00000618395 EDC4Q6P2E9 1401 aaKnown RBP15.22■□□□□ 0.03
COL5A1-208ENST00000618395 B3GALNT1O75752 331 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 MMP14P50281 582 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 PON2Q15165 354 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 PDK4Q16654 411 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 ARMC8Q8IUR7 673 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 FOXP4Q8IVH2 680 aaPredicted RBP15.22■□□□□ 0.03
COL5A1-208ENST00000618395 PIH1D2Q8WWB5 315 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 SEMA4DQ92854 862 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.22■□□□□ 0.03
COL5A1-208ENST00000618395 SLC2A4P14672 509 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 SQLEQ14534 574 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 RAB12Q6IQ22 244 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 TMLHEQ9NVH6 421 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 NKIRAS2Q9NYR9 191 aa15.22■□□□□ 0.03
COL5A1-208ENST00000618395 BMP3P12645 472 aa15.21■□□□□ 0.03
COL5A1-208ENST00000618395 CRABP2P29373 138 aa15.21■□□□□ 0.03
COL5A1-208ENST00000618395 MNDAP41218 407 aa15.21■□□□□ 0.03
COL5A1-208ENST00000618395 VWA5B1Q5TIE3 1220 aa15.21■□□□□ 0.03
COL5A1-208ENST00000618395 KLHDC10Q6PID8 442 aa15.21■□□□□ 0.03
COL5A1-208ENST00000618395 TBC1D14Q9P2M4 693 aa15.21■□□□□ 0.03
COL5A1-208ENST00000618395 CASZ1Q86V15 1759 aa15.21■□□□□ 0.03
COL5A1-208ENST00000618395 DDX3YO15523 660 aaKnown RBP15.21■□□□□ 0.03
COL5A1-208ENST00000618395 AP2A2O94973 939 aa15.21■□□□□ 0.03
COL5A1-208ENST00000618395 SLC16A2P36021 539 aa15.21■□□□□ 0.03
COL5A1-208ENST00000618395 CYP24A1Q07973 514 aa15.21■□□□□ 0.03
COL5A1-208ENST00000618395 PRKG2Q13237 762 aa15.21■□□□□ 0.03
COL5A1-208ENST00000618395 MYBPC3Q14896 1274 aa15.21■□□□□ 0.03
COL5A1-208ENST00000618395 PIGNO95427 931 aa15.21■□□□□ 0.03
COL5A1-208ENST00000618395 ADORA1P30542 326 aa15.21■□□□□ 0.03
COL5A1-208ENST00000618395 CCNFP41002 786 aa15.21■□□□□ 0.03
COL5A1-208ENST00000618395 ZNF45Q02386 682 aa15.21■□□□□ 0.03
COL5A1-208ENST00000618395 EMC2Q15006 297 aa15.21■□□□□ 0.03
COL5A1-208ENST00000618395 USP43Q70EL4 1123 aa15.21■□□□□ 0.03
COL5A1-208ENST00000618395 DNAJA4Q8WW22 397 aaPredicted RBP15.21■□□□□ 0.03
COL5A1-208ENST00000618395 PHF21BQ96EK2 531 aa15.21■□□□□ 0.03
COL5A1-208ENST00000618395 RBM4BQ9BQ04 359 aaKnown RBP15.21■□□□□ 0.03
COL5A1-208ENST00000618395 RBM4Q9BWF3 364 aaKnown RBP15.21■□□□□ 0.03
COL5A1-208ENST00000618395 YIPF2Q9BWQ6 316 aa15.21■□□□□ 0.03
COL5A1-208ENST00000618395 CHIAQ9BZP6 476 aa15.21■□□□□ 0.03
COL5A1-208ENST00000618395 UBQLN2Q9UHD9 624 aa15.21■□□□□ 0.03
COL5A1-208ENST00000618395 CLCA1A8K7I4 914 aa15.21■□□□□ 0.03
COL5A1-208ENST00000618395 BTBD19C9JJ37 291 aa15.21■□□□□ 0.03
COL5A1-208ENST00000618395 MTMR1Q13613 665 aa15.21■□□□□ 0.03
COL5A1-208ENST00000618395 NCOA4Q13772 614 aa15.21■□□□□ 0.03
COL5A1-208ENST00000618395 GPALPP1Q8IXQ4 340 aa15.21■□□□□ 0.03
COL5A1-208ENST00000618395 C2orf40Q9H1Z8 148 aa15.21■□□□□ 0.03
COL5A1-208ENST00000618395 DRG1Q9Y295 367 aaKnown RBP15.21■□□□□ 0.03
COL5A1-208ENST00000618395 PPEF2O14830 753 aa15.21■□□□□ 0.03
COL5A1-208ENST00000618395 RBM34P42696 430 aaKnown RBP15.21■□□□□ 0.03
COL5A1-208ENST00000618395 AP2S1P53680 142 aaPredicted RBP15.21■□□□□ 0.03
COL5A1-208ENST00000618395 PIK3R6Q5UE93 754 aa15.21■□□□□ 0.03
COL5A1-208ENST00000618395 SPESP1Q6UW49 350 aa15.21■□□□□ 0.03
COL5A1-208ENST00000618395 CPNE1Q99829 537 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms