RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 DSG1Q02413 1049 aa17.65■□□□□ 0.42
PCDHGC3-205ENST00000617641 NAB1Q13506 487 aa17.65■□□□□ 0.42
PCDHGC3-205ENST00000617641 ZNF354CQ86Y25 554 aa17.65■□□□□ 0.42
PCDHGC3-205ENST00000617641 THOC1Q96FV9 657 aaKnown RBP17.65■□□□□ 0.42
PCDHGC3-205ENST00000617641 KLHL5Q96PQ7 755 aa17.65■□□□□ 0.42
PCDHGC3-205ENST00000617641 NACA2Q9H009 215 aa17.65■□□□□ 0.42
PCDHGC3-205ENST00000617641 VPS11Q9H270 941 aa17.65■□□□□ 0.42
PCDHGC3-205ENST00000617641 RC3H2Q9HBD1 1191 aaKnown RBP17.65■□□□□ 0.42
PCDHGC3-205ENST00000617641 SOX13Q9UN79 622 aa17.65■□□□□ 0.42
PCDHGC3-205ENST00000617641 HBS1LQ9Y450 684 aaKnown RBP17.65■□□□□ 0.42
PCDHGC3-205ENST00000617641 ZNF840PA6NDX5 716 aa17.65■□□□□ 0.42
PCDHGC3-205ENST00000617641 EDF1O60869 148 aaKnown RBP17.65■□□□□ 0.42
PCDHGC3-205ENST00000617641 F7P08709 466 aaPredicted RBP17.65■□□□□ 0.42
PCDHGC3-205ENST00000617641 TACR2P21452 398 aa17.65■□□□□ 0.42
PCDHGC3-205ENST00000617641 NUMBP49757 651 aa17.65■□□□□ 0.42
PCDHGC3-205ENST00000617641 KPNA1P52294 538 aaPredicted RBP17.65■□□□□ 0.42
PCDHGC3-205ENST00000617641 GEMP55040 296 aa17.65■□□□□ 0.42
PCDHGC3-205ENST00000617641 BTG3Q14201 252 aaPredicted RBP17.65■□□□□ 0.42
PCDHGC3-205ENST00000617641 TIFABQ6ZNK6 161 aa17.65■□□□□ 0.42
PCDHGC3-205ENST00000617641 NDUFAF2Q8N183 169 aa17.65■□□□□ 0.42
PCDHGC3-205ENST00000617641 CCDC63Q8NA47 563 aa17.65■□□□□ 0.42
PCDHGC3-205ENST00000617641 AUTS2Q8WXX7 1259 aa17.65■□□□□ 0.42
PCDHGC3-205ENST00000617641 PTPRN2Q92932 1015 aa17.65■□□□□ 0.42
PCDHGC3-205ENST00000617641 PSMG2Q969U7 264 aa17.65■□□□□ 0.42
PCDHGC3-205ENST00000617641 CEP295NLQ96MC4 621 aa17.65■□□□□ 0.42
PCDHGC3-205ENST00000617641 TRIM43BA6NCK2 446 aa17.64■□□□□ 0.41
PCDHGC3-205ENST00000617641 TOP3BO95985 862 aaKnown RBP17.64■□□□□ 0.41
PCDHGC3-205ENST00000617641 NMBRP28336 390 aa17.64■□□□□ 0.41
PCDHGC3-205ENST00000617641 LIG3P49916 1009 aa17.64■□□□□ 0.41
PCDHGC3-205ENST00000617641 DENND5AQ6IQ26 1287 aa17.64■□□□□ 0.41
PCDHGC3-205ENST00000617641 RFWD3Q6PCD5 774 aa17.64■□□□□ 0.41
PCDHGC3-205ENST00000617641 KDELC2Q7Z4H8 507 aa17.64■□□□□ 0.41
PCDHGC3-205ENST00000617641 LGI2Q8N0V4 545 aa17.64■□□□□ 0.41
PCDHGC3-205ENST00000617641 PDZD8Q8NEN9 1154 aa17.64■□□□□ 0.41
PCDHGC3-205ENST00000617641 TRIM43Q96BQ3 446 aaPredicted RBP17.64■□□□□ 0.41
PCDHGC3-205ENST00000617641 PABPC5Q96DU9 382 aaKnown RBP17.64■□□□□ 0.41
PCDHGC3-205ENST00000617641 ZNF778Q96MU6 729 aa17.64■□□□□ 0.41
PCDHGC3-205ENST00000617641 AGAP2Q99490 1192 aa17.64■□□□□ 0.41
PCDHGC3-205ENST00000617641 SP110Q9HB58 689 aa17.64■□□□□ 0.41
PCDHGC3-205ENST00000617641 NT5MQ9NPB1 228 aa17.64■□□□□ 0.41
PCDHGC3-205ENST00000617641 ABCF3Q9NUQ8 709 aa17.64■□□□□ 0.41
PCDHGC3-205ENST00000617641 DONSONQ9NYP3 566 aa17.64■□□□□ 0.41
PCDHGC3-205ENST00000617641 PRKAG3Q9UGI9 489 aa17.64■□□□□ 0.41
PCDHGC3-205ENST00000617641 GGT7Q9UJ14 662 aa17.64■□□□□ 0.41
PCDHGC3-205ENST00000617641 ARL2BPQ9Y2Y0 163 aa17.64■□□□□ 0.41
PCDHGC3-205ENST00000617641 PLLPQ9Y342 182 aa17.64■□□□□ 0.41
PCDHGC3-205ENST00000617641 YIPF1Q9Y548 306 aa17.64■□□□□ 0.41
PCDHGC3-205ENST00000617641 MAGEB16A2A368 324 aa17.64■□□□□ 0.41
PCDHGC3-205ENST00000617641 COCHO43405 550 aa17.64■□□□□ 0.41
PCDHGC3-205ENST00000617641 ITGA2BP08514 1039 aa17.64■□□□□ 0.41
PCDHGC3-205ENST00000617641 ACRP10323 421 aa17.64■□□□□ 0.41
PCDHGC3-205ENST00000617641 SLC6A4P31645 630 aa17.64■□□□□ 0.41
PCDHGC3-205ENST00000617641 ADRA1AP35348 466 aa17.64■□□□□ 0.41
PCDHGC3-205ENST00000617641 WDR5P61964 334 aaKnown RBP17.64■□□□□ 0.41
PCDHGC3-205ENST00000617641 SLC10A7Q0GE19 358 aa17.64■□□□□ 0.41
PCDHGC3-205ENST00000617641 C10orf67Q8IYJ2 551 aa17.64■□□□□ 0.41
PCDHGC3-205ENST00000617641 CFAP52Q8N1V2 620 aa17.64■□□□□ 0.41
PCDHGC3-205ENST00000617641 GRAMD1AQ96CP6 724 aa17.64■□□□□ 0.41
PCDHGC3-205ENST00000617641 CDK5RAP1Q96SZ6 601 aaKnown RBP17.64■□□□□ 0.41
PCDHGC3-205ENST00000617641 HERC2P3Q9BVR0 1158 aa17.64■□□□□ 0.41
PCDHGC3-205ENST00000617641 C11orf49Q9H6J7 331 aa17.64■□□□□ 0.41
PCDHGC3-205ENST00000617641 MKS1Q9NXB0 559 aa17.64■□□□□ 0.41
PCDHGC3-205ENST00000617641 TXNDC16Q9P2K2 825 aa17.64■□□□□ 0.41
PCDHGC3-205ENST00000617641 STARD13Q9Y3M8 1113 aa17.64■□□□□ 0.41
PCDHGC3-205ENST00000617641 AP3B1O00203 1094 aa17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 TPP1O14773 563 aa17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 RAMP2O60895 175 aa17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 ALDOAP04075 364 aaKnown RBP17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 DNAJB2P25686 324 aa17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 OR1E1P30953 314 aa17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 GP5P40197 560 aa17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 SERPINB4P48594 390 aa17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 RENBPP51606 427 aa17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 MAXP61244 160 aa17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 PLD1Q13393 1074 aa17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 HNRNPDQ14103 355 aaKnown RBP17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 POU6F1Q14863 301 aa17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 POLD3Q15054 466 aaPredicted RBP17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 HSP90AA5PQ58FG0 334 aa17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 HECTD3Q5T447 861 aa17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 SNX30Q5VWJ9 437 aa17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 TPGS2Q68CL5 300 aa17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 ZNF449Q6P9G9 518 aa17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 TRPM8Q7Z2W7 1104 aa17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 OVCA2Q8WZ82 227 aa17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 AZIN2Q96A70 460 aa17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 MRGPRX2Q96LB1 330 aa17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 CPNE1Q99829 537 aa17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 FSD1LQ9BXM9 530 aa17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 ATXN3LQ9H3M9 355 aa17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 MANSC1Q9H8J5 431 aa17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 C20orf96Q9NUD7 363 aaPredicted RBP17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 F5H5T6 163 aa17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 ACSL4O60488 711 aa17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 TIMP1P01033 207 aa17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 ACVRL1P37023 503 aa17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 ALDH1A3P47895 512 aa17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 GJA8P48165 433 aa17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 FRG1Q14331 258 aaKnown RBP17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 PCSK7Q16549 785 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms