RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 SMC6Q96SB8 1091 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 SPON2Q9BUD6 331 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 STMN4Q9H169 189 aaPredicted RBP7.95□□□□□ -1.14
NEK3-207ENST00000617054 GBA3Q9H227 469 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 PLK2Q9NYY3 685 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 TRPM5Q9NZQ8 1165 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 GGT7Q9UJ14 662 aa7.95□□□□□ -1.14
NEK3-207ENST00000617054 TCP11X1B4DZS4 312 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 TRIM49D1C9J1S8 452 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 MATN3O15232 486 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 AP2A1O95782 977 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 LINC00271P0C7V0 271 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 SLC2A3P11169 496 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 TACR2P21452 398 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 CCNCP24863 283 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 SARNPP82979 210 aaKnown RBP7.94□□□□□ -1.14
NEK3-207ENST00000617054 POLD3Q15054 466 aaPredicted RBP7.94□□□□□ -1.14
NEK3-207ENST00000617054 FAM47EQ6ZV65 393 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 CPLX4Q7Z7G2 160 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 DDX53Q86TM3 631 aaKnown RBP7.94□□□□□ -1.14
NEK3-207ENST00000617054 LRRC6Q86X45 466 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 MAB21L3Q8N8X9 362 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 MICAL1Q8TDZ2 1067 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 MZB1Q8WU39 189 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 CNOT10Q9H9A5 744 aaKnown RBP7.94□□□□□ -1.14
NEK3-207ENST00000617054 CERS4Q9HA82 394 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 IL23AQ9NPF7 189 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 HCFC1R1Q9NWW0 138 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 PCDHA11Q9Y5I1 949 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 DOCK4Q8N1I0 1966 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 HMX2A2RU54 273 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 ANKRD33BA6NCL7 494 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 SMAPO00193 183 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 NDC80O14777 642 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 FGF10O15520 208 aaPredicted RBP7.94□□□□□ -1.14
NEK3-207ENST00000617054 RFPL2O75678 378 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 STC2O76061 302 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 LAG3P18627 525 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 HOXC13P31276 330 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 STX2P32856 288 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 HARS2P49590 506 aaKnown RBP7.94□□□□□ -1.14
NEK3-207ENST00000617054 IRX4P78413 519 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 DSC2Q02487 901 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 CRYMQ14894 314 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 KLHL38Q2WGJ6 581 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 ZNF697Q5TEC3 545 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 PLPP4Q5VZY2 271 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 KCTD11Q693B1 232 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 FAM109BQ6ICB4 259 aaPredicted RBP7.94□□□□□ -1.14
NEK3-207ENST00000617054 CDHR3Q6ZTQ4 885 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 FIBCD1Q8N539 461 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 GSDMBQ8TAX9 411 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 SLC44A1Q8WWI5 657 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 FICDQ9BVA6 458 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 XAB2Q9HCS7 855 aaKnown RBP7.94□□□□□ -1.14
NEK3-207ENST00000617054 PRKAG2Q9UGJ0 569 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 PCDHB12Q9Y5F1 795 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 INSL5Q9Y5Q6 135 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 PTPRSQ13332 1948 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 PLXNA3P51805 1871 aa7.94□□□□□ -1.14
NEK3-207ENST00000617054 CCL22O00626 93 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 PER2O15055 1255 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 MUSKO15146 869 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 BUD23O43709 281 aaKnown RBP7.93□□□□□ -1.14
NEK3-207ENST00000617054 PEX11BO96011 259 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 IGLV3-27P01718 113 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 PRKCGP05129 697 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 MBL2P11226 248 aaPredicted RBP7.93□□□□□ -1.14
NEK3-207ENST00000617054 ADRA1DP25100 572 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 NMBRP28336 390 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 ATP5DP30049 168 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 FOXN2P32314 431 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 RFC2P35250 354 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 CD86P42081 329 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 SMARCB1Q12824 385 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 HSP90AA5PQ58FG0 334 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 CROCCP2Q86T23 111 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 PGBD5Q8N414 524 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 ANKLE1Q8NAG6 615 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 TCP10LQ8TDR4 215 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 ZNF669Q96BR6 464 aaPredicted RBP7.93□□□□□ -1.14
NEK3-207ENST00000617054 PRICKLE1Q96MT3 831 aaPredicted RBP7.93□□□□□ -1.14
NEK3-207ENST00000617054 ELAC2Q9BQ52 826 aaKnown RBP7.93□□□□□ -1.14
NEK3-207ENST00000617054 TCF25Q9BQ70 676 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 C17orf80Q9BSJ5 609 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 DHRS4Q9BTZ2 278 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 TTLL2Q9BWV7 592 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 SLCO1B3Q9NPD5 702 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 OLA1Q9NTK5 396 aaKnown RBP7.93□□□□□ -1.14
NEK3-207ENST00000617054 FGFR1OP2Q9NVK5 253 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 SLC2A6Q9UGQ3 507 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 SLC24A2Q9UI40 661 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 AGO1Q9UL18 857 aaKnown RBP7.93□□□□□ -1.14
NEK3-207ENST00000617054 COL4A4P53420 1690 aaPredicted RBP7.93□□□□□ -1.14
NEK3-207ENST00000617054 A0A0U1RQS6 177 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 A0A1W2PRU2 124 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 FAM47DPA6NHR8 397 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 F5H5T6 163 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 CCL16O15467 120 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 TLL1O43897 1013 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms