RNA–Protein interactions for RNA: ENST00000616614.4

FMR1-216, Transcript of fragile X mental retardation 1, human

TSL 5

Gene FMR1, Length 1,409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FMR1-216	ENST00000616614	MARCKSL1	P49006	195 aa		32.51	■■■□□ 2.79
FMR1-216	ENST00000616614	SERPINH1	P50454	418 aa	Known RBP	32.51	■■■□□ 2.79
FMR1-216	ENST00000616614	PAPOLA	P51003	745 aa	Known RBP	32.51	■■■□□ 2.79
FMR1-216	ENST00000616614	ANKRD20A8P	Q5CZ79	823 aa		32.51	■■■□□ 2.79
FMR1-216	ENST00000616614	ZFYVE27	Q5T4F4	411 aa		32.51	■■■□□ 2.79
FMR1-216	ENST00000616614		Q6ZVU0	165 aa		32.51	■■■□□ 2.79
FMR1-216	ENST00000616614	CACUL1	Q86Y37	369 aa		32.51	■■■□□ 2.79
FMR1-216	ENST00000616614	RLN3	Q8WXF3	142 aa		32.51	■■■□□ 2.79
FMR1-216	ENST00000616614	PRDM16	Q9HAZ2	1276 aa		32.51	■■■□□ 2.79
FMR1-216	ENST00000616614	TARSL2	A2RTX5	802 aa	Known RBP	32.5	■■■□□ 2.79
FMR1-216	ENST00000616614	LRRD1	A4D1F6	860 aa		32.5	■■■□□ 2.79
FMR1-216	ENST00000616614	C7	P10643	843 aa		32.5	■■■□□ 2.79
FMR1-216	ENST00000616614	TMCO3	Q6UWJ1	677 aa		32.5	■■■□□ 2.79
FMR1-216	ENST00000616614	ARHGAP36	Q6ZRI8	547 aa		32.5	■■■□□ 2.79
FMR1-216	ENST00000616614	ZNF354C	Q86Y25	554 aa		32.5	■■■□□ 2.79
FMR1-216	ENST00000616614	STK40	Q8N2I9	435 aa		32.5	■■■□□ 2.79
FMR1-216	ENST00000616614	PQLC3	Q8N755	202 aa		32.5	■■■□□ 2.79
FMR1-216	ENST00000616614	KRT35	Q92764	455 aa		32.5	■■■□□ 2.79
FMR1-216	ENST00000616614	CALR3	Q96L12	384 aa	Known RBP	32.5	■■■□□ 2.79
FMR1-216	ENST00000616614	HPCAL4	Q9UM19	191 aa		32.5	■■■□□ 2.79
FMR1-216	ENST00000616614		J3KR12	359 aa		32.49	■■■□□ 2.79
FMR1-216	ENST00000616614	SLC20A2	Q08357	652 aa		32.49	■■■□□ 2.79
FMR1-216	ENST00000616614	KIAA1324	Q6UXG2	1013 aa	Known RBP	32.49	■■■□□ 2.79
FMR1-216	ENST00000616614	MAP7D3	Q8IWC1	876 aa		32.49	■■■□□ 2.79
FMR1-216	ENST00000616614	TXLNB	Q8N3L3	684 aa		32.49	■■■□□ 2.79
FMR1-216	ENST00000616614	RNF25	Q96BH1	459 aa	Predicted RBP	32.49	■■■□□ 2.79
FMR1-216	ENST00000616614	RSPH9	Q9H1X1	276 aa	Predicted RBP	32.49	■■■□□ 2.79
FMR1-216	ENST00000616614	FCF1	Q9Y324	198 aa	Known RBP	32.49	■■■□□ 2.79
FMR1-216	ENST00000616614	CHD5	Q8TDI0	1954 aa		32.49	■■■□□ 2.79
FMR1-216	ENST00000616614	CKAP5	Q14008	2032 aa		32.48	■■■□□ 2.79
FMR1-216	ENST00000616614	KRT1	P04264	644 aa		32.48	■■■□□ 2.79
FMR1-216	ENST00000616614	CLCN6	P51797	869 aa		32.48	■■■□□ 2.79
FMR1-216	ENST00000616614	RPS14	P62263	151 aa	Known RBP	32.48	■■■□□ 2.79
FMR1-216	ENST00000616614	MAP7D1	Q3KQU3	841 aa		32.48	■■■□□ 2.79
FMR1-216	ENST00000616614	NCBP2-AS2	Q69YL0	99 aa		32.48	■■■□□ 2.79
FMR1-216	ENST00000616614	FAM160A2	Q8N612	972 aa	Predicted RBP	32.48	■■■□□ 2.79
FMR1-216	ENST00000616614	LZTR1	Q8N653	840 aa		32.48	■■■□□ 2.79
FMR1-216	ENST00000616614	GAB3	Q8WWW8	586 aa		32.48	■■■□□ 2.79
FMR1-216	ENST00000616614	ANP32B	Q92688	251 aa	Known RBP	32.48	■■■□□ 2.79
FMR1-216	ENST00000616614	ZNF830	Q96NB3	372 aa	Predicted RBP	32.48	■■■□□ 2.79
FMR1-216	ENST00000616614	TNKS2	Q9H2K2	1166 aa		32.48	■■■□□ 2.79
FMR1-216	ENST00000616614	KCNF1	Q9H3M0	494 aa		32.48	■■■□□ 2.79
FMR1-216	ENST00000616614	PDF	Q9HBH1	243 aa		32.48	■■■□□ 2.79
FMR1-216	ENST00000616614	CXorf51A	A0A1B0GTR3	108 aa		32.47	■■■□□ 2.79
FMR1-216	ENST00000616614	DFFA	O00273	331 aa		32.47	■■■□□ 2.79
FMR1-216	ENST00000616614	PSTPIP1	O43586	416 aa		32.47	■■■□□ 2.79
FMR1-216	ENST00000616614	C22orf39	Q6P5X5	142 aa		32.47	■■■□□ 2.79
FMR1-216	ENST00000616614	ZC3H14	Q6PJT7	736 aa	Known RBP	32.47	■■■□□ 2.79
FMR1-216	ENST00000616614	KIAA1524	Q8TCG1	905 aa		32.47	■■■□□ 2.79
FMR1-216	ENST00000616614	SIPA1	Q96FS4	1042 aa		32.47	■■■□□ 2.79
FMR1-216	ENST00000616614	DDX56	Q9NY93	547 aa	Known RBP	32.47	■■■□□ 2.79
FMR1-216	ENST00000616614	ZBTB24	O43167	697 aa	Predicted RBP	32.46	■■■□□ 2.79
FMR1-216	ENST00000616614	PALM	O75781	387 aa		32.46	■■■□□ 2.79
FMR1-216	ENST00000616614	RPP40	O75818	363 aa	Known RBP	32.46	■■■□□ 2.79
FMR1-216	ENST00000616614	P2RY2	P41231	377 aa		32.46	■■■□□ 2.79
FMR1-216	ENST00000616614	OR2A12	Q8NGT7	310 aa		32.46	■■■□□ 2.79
FMR1-216	ENST00000616614	PRCC	Q92733	491 aa	Predicted RBP	32.46	■■■□□ 2.79
FMR1-216	ENST00000616614	RNF157	Q96PX1	679 aa		32.46	■■■□□ 2.79
FMR1-216	ENST00000616614	CAPN6	Q9Y6Q1	641 aa		32.46	■■■□□ 2.79
FMR1-216	ENST00000616614	ARHGAP42	A6NI28	874 aa		32.45	■■■□□ 2.79
FMR1-216	ENST00000616614	BNIP3L	O60238	219 aa		32.45	■■■□□ 2.79
FMR1-216	ENST00000616614	PRAMEF11	O60813	436 aa		32.45	■■■□□ 2.79
FMR1-216	ENST00000616614	CNR2	P34972	360 aa		32.45	■■■□□ 2.79
FMR1-216	ENST00000616614	USP39	Q53GS9	565 aa	Known RBP	32.45	■■■□□ 2.79
FMR1-216	ENST00000616614	MFSD7	Q6UXD7	560 aa		32.45	■■■□□ 2.79
FMR1-216	ENST00000616614	FBRS	Q9HAH7	460 aa		32.45	■■■□□ 2.79
FMR1-216	ENST00000616614	MBD1	Q9UIS9	605 aa	Predicted RBP	32.45	■■■□□ 2.79
FMR1-216	ENST00000616614	MFSD11	O43934	449 aa		32.44	■■■□□ 2.78
FMR1-216	ENST00000616614	CCDC175	P0C221	793 aa		32.44	■■■□□ 2.78
FMR1-216	ENST00000616614	BCKDHB	P21953	392 aa		32.44	■■■□□ 2.78
FMR1-216	ENST00000616614	ELAVL3	Q14576	367 aa	Known RBP	32.44	■■■□□ 2.78
FMR1-216	ENST00000616614	PAFAH1B3	Q15102	231 aa	Known RBP	32.44	■■■□□ 2.78
FMR1-216	ENST00000616614	METTL3	Q86U44	580 aa	Known RBP	32.44	■■■□□ 2.78
FMR1-216	ENST00000616614	MMAA	Q8IVH4	418 aa	Known RBP	32.44	■■■□□ 2.78
FMR1-216	ENST00000616614	CEP44	Q9C0F1	390 aa		32.44	■■■□□ 2.78
FMR1-216	ENST00000616614	ITM2C	Q9NQX7	267 aa		32.44	■■■□□ 2.78
FMR1-216	ENST00000616614	GUCA1B	Q9UMX6	200 aa		32.44	■■■□□ 2.78
FMR1-216	ENST00000616614	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	32.43	■■■□□ 2.78
FMR1-216	ENST00000616614	ZNF487	B1APH4	448 aa		32.43	■■■□□ 2.78
FMR1-216	ENST00000616614	RNF103	O00237	685 aa		32.43	■■■□□ 2.78
FMR1-216	ENST00000616614	CTNNA1	P35221	906 aa	Known RBP	32.43	■■■□□ 2.78
FMR1-216	ENST00000616614	NT5DC3	Q86UY8	548 aa		32.43	■■■□□ 2.78
FMR1-216	ENST00000616614	KATNAL2	Q8IYT4	538 aa		32.43	■■■□□ 2.78
FMR1-216	ENST00000616614	CHST14	Q8NCH0	376 aa		32.43	■■■□□ 2.78
FMR1-216	ENST00000616614	EPC1	Q9H2F5	836 aa		32.43	■■■□□ 2.78
FMR1-216	ENST00000616614	USP36	Q9P275	1121 aa	Known RBP	32.43	■■■□□ 2.78
FMR1-216	ENST00000616614	SARDH	Q9UL12	918 aa		32.43	■■■□□ 2.78
FMR1-216	ENST00000616614	CYP8B1	Q9UNU6	501 aa		32.43	■■■□□ 2.78
FMR1-216	ENST00000616614	TMCC1	O94876	653 aa		32.43	■■■□□ 2.78
FMR1-216	ENST00000616614	GEMIN4	P57678	1058 aa	Known RBP	32.43	■■■□□ 2.78
FMR1-216	ENST00000616614	CYTH1	Q15438	398 aa		32.43	■■■□□ 2.78
FMR1-216	ENST00000616614	TAZ	Q16635	292 aa		32.43	■■■□□ 2.78
FMR1-216	ENST00000616614	IFI16	Q16666	785 aa	Known RBP	32.43	■■■□□ 2.78
FMR1-216	ENST00000616614	ZNF776	Q68DI1	518 aa	Predicted RBP	32.43	■■■□□ 2.78
FMR1-216	ENST00000616614	VSIG1	Q86XK7	387 aa		32.43	■■■□□ 2.78
FMR1-216	ENST00000616614	RNF10	Q8N5U6	811 aa	Known RBP	32.43	■■■□□ 2.78
FMR1-216	ENST00000616614	SUMF1	Q8NBK3	374 aa		32.43	■■■□□ 2.78
FMR1-216	ENST00000616614	TSGA10	Q9BZW7	698 aa		32.43	■■■□□ 2.78
FMR1-216	ENST00000616614	IPO11	Q9UI26	975 aa	Known RBP	32.43	■■■□□ 2.78
FMR1-216	ENST00000616614	PCDHA3	Q9Y5H8	950 aa		32.43	■■■□□ 2.78

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms