RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 NADKO95544 446 aaPredicted RBP19.12■□□□□ 0.65
SPAST-203ENST00000615843 LTA4HP09960 611 aaKnown RBP19.12■□□□□ 0.65
SPAST-203ENST00000615843 FEN1P39748 380 aaKnown RBP19.12■□□□□ 0.65
SPAST-203ENST00000615843 NUMBP49757 651 aa19.12■□□□□ 0.65
SPAST-203ENST00000615843 ADIGQ0VDE8 80 aa19.12■□□□□ 0.65
SPAST-203ENST00000615843 VPS72Q15906 364 aa19.12■□□□□ 0.65
SPAST-203ENST00000615843 SLC15A2Q16348 729 aa19.12■□□□□ 0.65
SPAST-203ENST00000615843 ZSWIM7Q19AV6 140 aa19.12■□□□□ 0.65
SPAST-203ENST00000615843 MTX3Q5HYI7 312 aa19.12■□□□□ 0.65
SPAST-203ENST00000615843 ANGEL2Q5VTE6 544 aaKnown RBP19.12■□□□□ 0.65
SPAST-203ENST00000615843 ARHGAP36Q6ZRI8 547 aa19.12■□□□□ 0.65
SPAST-203ENST00000615843 TNS4Q8IZW8 715 aa19.12■□□□□ 0.65
SPAST-203ENST00000615843 ARHGEF3Q9NR81 526 aa19.12■□□□□ 0.65
SPAST-203ENST00000615843 CDH22Q9UJ99 828 aa19.12■□□□□ 0.65
SPAST-203ENST00000615843 LEF1Q9UJU2 399 aaPredicted RBP19.12■□□□□ 0.65
SPAST-203ENST00000615843 A0A087WZ62 844 aa19.11■□□□□ 0.65
SPAST-203ENST00000615843 MSX2P35548 267 aaPredicted RBP19.11■□□□□ 0.65
SPAST-203ENST00000615843 IDH2P48735 452 aaKnown RBP19.11■□□□□ 0.65
SPAST-203ENST00000615843 PIWIL4Q7Z3Z4 852 aaKnown RBP19.11■□□□□ 0.65
SPAST-203ENST00000615843 DEFB106AQ8N104 65 aa19.11■□□□□ 0.65
SPAST-203ENST00000615843 UBXN6Q9BZV1 441 aa19.11■□□□□ 0.65
SPAST-203ENST00000615843 ALG9Q9H6U8 611 aa19.11■□□□□ 0.65
SPAST-203ENST00000615843 ELP3Q9H9T3 547 aa19.11■□□□□ 0.65
SPAST-203ENST00000615843 SEMA4BQ9NPR2 832 aaPredicted RBP19.11■□□□□ 0.65
SPAST-203ENST00000615843 SALL4Q9UJQ4 1053 aa19.11■□□□□ 0.65
SPAST-203ENST00000615843 TK2O00142 265 aa19.11■□□□□ 0.65
SPAST-203ENST00000615843 BTN3A1O00481 513 aa19.11■□□□□ 0.65
SPAST-203ENST00000615843 S100A3P33764 101 aa19.11■□□□□ 0.65
SPAST-203ENST00000615843 MARSP56192 900 aaKnown RBP19.11■□□□□ 0.65
SPAST-203ENST00000615843 ST8SIA6P61647 398 aa19.11■□□□□ 0.65
SPAST-203ENST00000615843 C15orf59Q2T9L4 293 aaPredicted RBP19.11■□□□□ 0.65
SPAST-203ENST00000615843 PPP1R15BQ5SWA1 713 aa19.11■□□□□ 0.65
SPAST-203ENST00000615843 NEPROQ6NW34 567 aa19.11■□□□□ 0.65
SPAST-203ENST00000615843 DPP10Q8N608 796 aa19.11■□□□□ 0.65
SPAST-203ENST00000615843 UXS1Q8NBZ7 420 aa19.11■□□□□ 0.65
SPAST-203ENST00000615843 PADI4Q9UM07 663 aa19.11■□□□□ 0.65
SPAST-203ENST00000615843 SLC12A4Q9UP95 1085 aa19.11■□□□□ 0.65
SPAST-203ENST00000615843 EPB42P16452 691 aa19.11■□□□□ 0.65
SPAST-203ENST00000615843 CAP2P40123 477 aa19.11■□□□□ 0.65
SPAST-203ENST00000615843 GRIK3Q13003 919 aa19.11■□□□□ 0.65
SPAST-203ENST00000615843 USP4Q13107 963 aa19.11■□□□□ 0.65
SPAST-203ENST00000615843 TDRD10Q5VZ19 366 aaKnown RBP19.11■□□□□ 0.65
SPAST-203ENST00000615843 IL27RAQ6UWB1 636 aa19.11■□□□□ 0.65
SPAST-203ENST00000615843 SH3BP4Q9P0V3 963 aa19.11■□□□□ 0.65
SPAST-203ENST00000615843 ATP6V1HQ9UI12 483 aa19.11■□□□□ 0.65
SPAST-203ENST00000615843 SNX8Q9Y5X2 465 aa19.11■□□□□ 0.65
SPAST-203ENST00000615843 TGDSO95455 350 aa19.11■□□□□ 0.65
SPAST-203ENST00000615843 ABCB1P08183 1280 aaPredicted RBP19.11■□□□□ 0.65
SPAST-203ENST00000615843 HOXB8P17481 243 aaPredicted RBP19.11■□□□□ 0.65
SPAST-203ENST00000615843 CHRNA5P30532 468 aa19.11■□□□□ 0.65
SPAST-203ENST00000615843 RNF19BQ6ZMZ0 732 aa19.11■□□□□ 0.65
SPAST-203ENST00000615843 PHF13Q86YI8 300 aaPredicted RBP19.11■□□□□ 0.65
SPAST-203ENST00000615843 CADM1Q9BY67 442 aaKnown RBP19.11■□□□□ 0.65
SPAST-203ENST00000615843 H3BNX3 289 aa19.1■□□□□ 0.65
SPAST-203ENST00000615843 PCNAP12004 261 aa19.1■□□□□ 0.65
SPAST-203ENST00000615843 TRAP1Q12931 704 aaKnown RBP19.1■□□□□ 0.65
SPAST-203ENST00000615843 LIPMQ5VYY2 423 aa19.1■□□□□ 0.65
SPAST-203ENST00000615843 RNF157Q96PX1 679 aa19.1■□□□□ 0.65
SPAST-203ENST00000615843 PTTG2Q9NZH5 202 aa19.1■□□□□ 0.65
SPAST-203ENST00000615843 SQORQ9Y6N5 450 aa19.1■□□□□ 0.65
SPAST-203ENST00000615843 WNT7AO00755 349 aa19.1■□□□□ 0.65
SPAST-203ENST00000615843 TSPAN9O75954 239 aa19.1■□□□□ 0.65
SPAST-203ENST00000615843 ZNF37AP17032 561 aaPredicted RBP19.1■□□□□ 0.65
SPAST-203ENST00000615843 RENBPP51606 427 aa19.1■□□□□ 0.65
SPAST-203ENST00000615843 RTP1P59025 263 aa19.1■□□□□ 0.65
SPAST-203ENST00000615843 KLF10Q13118 480 aa19.1■□□□□ 0.65
SPAST-203ENST00000615843 FBXO47Q5MNV8 452 aa19.1■□□□□ 0.65
SPAST-203ENST00000615843 C6orf52Q5T4I8 152 aa19.1■□□□□ 0.65
SPAST-203ENST00000615843 GLB1LQ6UWU2 654 aa19.1■□□□□ 0.65
SPAST-203ENST00000615843 AADATQ8N5Z0 425 aa19.1■□□□□ 0.65
SPAST-203ENST00000615843 EDEM1Q92611 657 aa19.1■□□□□ 0.65
SPAST-203ENST00000615843 ZBTB45Q96K62 511 aaPredicted RBP19.1■□□□□ 0.65
SPAST-203ENST00000615843 ZMYM5Q9UJ78 669 aa19.1■□□□□ 0.65
SPAST-203ENST00000615843 DSEQ9UL01 958 aa19.1■□□□□ 0.65
SPAST-203ENST00000615843 C5orf60A6NFR6 353 aa19.1■□□□□ 0.65
SPAST-203ENST00000615843 FOXO6A8MYZ6 492 aa19.1■□□□□ 0.65
SPAST-203ENST00000615843 RGS14O43566 566 aa19.1■□□□□ 0.65
SPAST-203ENST00000615843 TRUB2O95900 331 aaKnown RBP19.1■□□□□ 0.65
SPAST-203ENST00000615843 SLC26A3P40879 764 aa19.1■□□□□ 0.65
SPAST-203ENST00000615843 ARHGEF6Q15052 776 aa19.1■□□□□ 0.65
SPAST-203ENST00000615843 PHKG1Q16816 387 aa19.1■□□□□ 0.65
SPAST-203ENST00000615843 USP39Q53GS9 565 aaKnown RBP19.1■□□□□ 0.65
SPAST-203ENST00000615843 ZPBP2Q6X784 338 aa19.1■□□□□ 0.65
SPAST-203ENST00000615843 KIAA0408Q6ZU52 694 aa19.1■□□□□ 0.65
SPAST-203ENST00000615843 SLC9A9Q8IVB4 645 aa19.1■□□□□ 0.65
SPAST-203ENST00000615843 RDH11Q8TC12 318 aa19.1■□□□□ 0.65
SPAST-203ENST00000615843 PLLPQ9Y342 182 aa19.1■□□□□ 0.65
SPAST-203ENST00000615843 RTN3O95197 1032 aaPredicted RBP19.1■□□□□ 0.65
SPAST-203ENST00000615843 ASS1P00966 412 aaKnown RBP19.1■□□□□ 0.65
SPAST-203ENST00000615843 SERPINF2P08697 491 aa19.1■□□□□ 0.65
SPAST-203ENST00000615843 SHMT1P34896 483 aa19.1■□□□□ 0.65
SPAST-203ENST00000615843 CDH18Q13634 790 aa19.1■□□□□ 0.65
SPAST-203ENST00000615843 NEK10Q6ZWH5 1172 aa19.1■□□□□ 0.65
SPAST-203ENST00000615843 MICALL2Q8IY33 904 aa19.1■□□□□ 0.65
SPAST-203ENST00000615843 PROX1Q92786 737 aa19.1■□□□□ 0.65
SPAST-203ENST00000615843 ADGRE3Q9BY15 652 aa19.1■□□□□ 0.65
SPAST-203ENST00000615843 NOL11Q9H8H0 719 aaKnown RBP19.1■□□□□ 0.65
SPAST-203ENST00000615843 TPD52L2O43399 206 aaKnown RBP19.09■□□□□ 0.65
SPAST-203ENST00000615843 PEX11AO75192 247 aa19.09■□□□□ 0.65
SPAST-203ENST00000615843 CENPAP49450 140 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms