RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 PCDH19Q8TAB3 1148 aa16.97■□□□□ 0.31
IRF1-211ENST00000613424 KIAA1524Q8TCG1 905 aa16.97■□□□□ 0.31
IRF1-211ENST00000613424 ZNF670Q9BS34 389 aa16.97■□□□□ 0.31
IRF1-211ENST00000613424 PRDM16Q9HAZ2 1276 aa16.97■□□□□ 0.31
IRF1-211ENST00000613424 DDX56Q9NY93 547 aaKnown RBP16.97■□□□□ 0.31
IRF1-211ENST00000613424 CXorf51AA0A1B0GTR3 108 aa16.96■□□□□ 0.31
IRF1-211ENST00000613424 LRRD1A4D1F6 860 aa16.96■□□□□ 0.31
IRF1-211ENST00000613424 GRID2IPA4D2P6 1211 aa16.96■□□□□ 0.31
IRF1-211ENST00000613424 ARHGAP42A6NI28 874 aa16.96■□□□□ 0.31
IRF1-211ENST00000613424 C3orf70A6NLC5 250 aaPredicted RBP16.96■□□□□ 0.31
IRF1-211ENST00000613424 PSTPIP1O43586 416 aa16.96■□□□□ 0.31
IRF1-211ENST00000613424 CNR2P34972 360 aa16.96■□□□□ 0.31
IRF1-211ENST00000613424 SERPINH1P50454 418 aaKnown RBP16.96■□□□□ 0.31
IRF1-211ENST00000613424 PAPOLAP51003 745 aaKnown RBP16.96■□□□□ 0.31
IRF1-211ENST00000613424 CLCN6P51797 869 aa16.96■□□□□ 0.31
IRF1-211ENST00000613424 NHLH1Q02575 133 aa16.96■□□□□ 0.31
IRF1-211ENST00000613424 SRSF5Q13243 272 aaKnown RBP16.96■□□□□ 0.31
IRF1-211ENST00000613424 IFI16Q16666 785 aaKnown RBP16.96■□□□□ 0.31
IRF1-211ENST00000613424 LEKR1Q6ZMV7 388 aa16.96■□□□□ 0.31
IRF1-211ENST00000613424 TP53INP2Q8IXH6 220 aa16.96■□□□□ 0.31
IRF1-211ENST00000613424 LRRC57Q8N9N7 239 aa16.96■□□□□ 0.31
IRF1-211ENST00000613424 FAF2Q96CS3 445 aa16.96■□□□□ 0.31
IRF1-211ENST00000613424 SIPA1Q96FS4 1042 aa16.96■□□□□ 0.31
IRF1-211ENST00000613424 FAM129BQ96TA1 746 aa16.96■□□□□ 0.31
IRF1-211ENST00000613424 FBRSQ9HAH7 460 aa16.96■□□□□ 0.31
IRF1-211ENST00000613424 INVSQ9Y283 1065 aa16.96■□□□□ 0.31
IRF1-211ENST00000613424 FANCMQ8IYD8 2048 aa16.96■□□□□ 0.3
IRF1-211ENST00000613424 DFFAO00273 331 aa16.95■□□□□ 0.3
IRF1-211ENST00000613424 ZNF821O75541 412 aaPredicted RBP16.95■□□□□ 0.3
IRF1-211ENST00000613424 KRT1P04264 644 aa16.95■□□□□ 0.3
IRF1-211ENST00000613424 PTMAP06454 111 aaKnown RBP16.95■□□□□ 0.3
IRF1-211ENST00000613424 NBL1P41271 181 aa16.95■□□□□ 0.3
IRF1-211ENST00000613424 USP39Q53GS9 565 aaKnown RBP16.95■□□□□ 0.3
IRF1-211ENST00000613424 KIAA1324Q6UXG2 1013 aaKnown RBP16.95■□□□□ 0.3
IRF1-211ENST00000613424 Q6ZVU0 165 aa16.95■□□□□ 0.3
IRF1-211ENST00000613424 STK40Q8N2I9 435 aa16.95■□□□□ 0.3
IRF1-211ENST00000613424 RNF10Q8N5U6 811 aaKnown RBP16.95■□□□□ 0.3
IRF1-211ENST00000613424 RLN3Q8WXF3 142 aa16.95■□□□□ 0.3
IRF1-211ENST00000613424 PRCCQ92733 491 aaPredicted RBP16.95■□□□□ 0.3
IRF1-211ENST00000613424 RNF25Q96BH1 459 aaPredicted RBP16.95■□□□□ 0.3
IRF1-211ENST00000613424 RNF157Q96PX1 679 aa16.95■□□□□ 0.3
IRF1-211ENST00000613424 TSGA10Q9BZW7 698 aa16.95■□□□□ 0.3
IRF1-211ENST00000613424 RSPH9Q9H1X1 276 aaPredicted RBP16.95■□□□□ 0.3
IRF1-211ENST00000613424 FCF1Q9Y324 198 aaKnown RBP16.95■□□□□ 0.3
IRF1-211ENST00000613424 EML5Q05BV3 1969 aa16.95■□□□□ 0.3
IRF1-211ENST00000613424 VPS13AQ96RL7 3174 aa16.94■□□□□ 0.3
IRF1-211ENST00000613424 ZSCAN5CA6NGD5 496 aaPredicted RBP16.94■□□□□ 0.3
IRF1-211ENST00000613424 ZNF487B1APH4 448 aa16.94■□□□□ 0.3
IRF1-211ENST00000613424 J3KR12 359 aa16.94■□□□□ 0.3
IRF1-211ENST00000613424 KRT86O43790 486 aa16.94■□□□□ 0.3
IRF1-211ENST00000613424 PALMO75781 387 aa16.94■□□□□ 0.3
IRF1-211ENST00000613424 RPP40O75818 363 aaKnown RBP16.94■□□□□ 0.3
IRF1-211ENST00000613424 CCDC175P0C221 793 aa16.94■□□□□ 0.3
IRF1-211ENST00000613424 C7P10643 843 aa16.94■□□□□ 0.3
IRF1-211ENST00000613424 SERPINB6P35237 376 aa16.94■□□□□ 0.3
IRF1-211ENST00000613424 GEMIN4P57678 1058 aaKnown RBP16.94■□□□□ 0.3
IRF1-211ENST00000613424 RPS14P62263 151 aaKnown RBP16.94■□□□□ 0.3
IRF1-211ENST00000613424 PAFAH1B3Q15102 231 aaKnown RBP16.94■□□□□ 0.3
IRF1-211ENST00000613424 ODF2Q5BJF6 829 aa16.94■□□□□ 0.3
IRF1-211ENST00000613424 NCBP2-AS2Q69YL0 99 aa16.94■□□□□ 0.3
IRF1-211ENST00000613424 ARHGAP36Q6ZRI8 547 aa16.94■□□□□ 0.3
IRF1-211ENST00000613424 METTL3Q86U44 580 aaKnown RBP16.94■□□□□ 0.3
IRF1-211ENST00000613424 VSIG1Q86XK7 387 aa16.94■□□□□ 0.3
IRF1-211ENST00000613424 PQLC3Q8N755 202 aa16.94■□□□□ 0.3
IRF1-211ENST00000613424 FRMD1Q8N878 549 aa16.94■□□□□ 0.3
IRF1-211ENST00000613424 GAB3Q8WWW8 586 aa16.94■□□□□ 0.3
IRF1-211ENST00000613424 KRT35Q92764 455 aa16.94■□□□□ 0.3
IRF1-211ENST00000613424 ZNF830Q96NB3 372 aaPredicted RBP16.94■□□□□ 0.3
IRF1-211ENST00000613424 CEP44Q9C0F1 390 aa16.94■□□□□ 0.3
IRF1-211ENST00000613424 TNKS2Q9H2K2 1166 aa16.94■□□□□ 0.3
IRF1-211ENST00000613424 ITM2CQ9NQX7 267 aa16.94■□□□□ 0.3
IRF1-211ENST00000613424 GUCA1BQ9UMX6 200 aa16.94■□□□□ 0.3
IRF1-211ENST00000613424 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.94■□□□□ 0.3
IRF1-211ENST00000613424 PCDHA3Q9Y5H8 950 aa16.94■□□□□ 0.3
IRF1-211ENST00000613424 BNIP3LO60238 219 aa16.93■□□□□ 0.3
IRF1-211ENST00000613424 PRAMEF11O60813 436 aa16.93■□□□□ 0.3
IRF1-211ENST00000613424 RNASEH1O60930 286 aaKnown RBP16.93■□□□□ 0.3
IRF1-211ENST00000613424 ZNF217O75362 1048 aa16.93■□□□□ 0.3
IRF1-211ENST00000613424 ACADMP11310 421 aa16.93■□□□□ 0.3
IRF1-211ENST00000613424 CTNNA1P35221 906 aaKnown RBP16.93■□□□□ 0.3
IRF1-211ENST00000613424 P2RY2P41231 377 aa16.93■□□□□ 0.3
IRF1-211ENST00000613424 MARCKSL1P49006 195 aa16.93■□□□□ 0.3
IRF1-211ENST00000613424 ELAVL3Q14576 367 aaKnown RBP16.93■□□□□ 0.3
IRF1-211ENST00000613424 MAP7D1Q3KQU3 841 aa16.93■□□□□ 0.3
IRF1-211ENST00000613424 INO80DQ53TQ3 878 aaPredicted RBP16.93■□□□□ 0.3
IRF1-211ENST00000613424 ZNF776Q68DI1 518 aaPredicted RBP16.93■□□□□ 0.3
IRF1-211ENST00000613424 C22orf39Q6P5X5 142 aa16.93■□□□□ 0.3
IRF1-211ENST00000613424 MFSD7Q6UXD7 560 aa16.93■□□□□ 0.3
IRF1-211ENST00000613424 ZNF662Q6ZS27 426 aa16.93■□□□□ 0.3
IRF1-211ENST00000613424 NT5DC3Q86UY8 548 aa16.93■□□□□ 0.3
IRF1-211ENST00000613424 CACUL1Q86Y37 369 aa16.93■□□□□ 0.3
IRF1-211ENST00000613424 MMAAQ8IVH4 418 aaKnown RBP16.93■□□□□ 0.3
IRF1-211ENST00000613424 KATNAL2Q8IYT4 538 aa16.93■□□□□ 0.3
IRF1-211ENST00000613424 SYCE1Q8N0S2 351 aa16.93■□□□□ 0.3
IRF1-211ENST00000613424 OR2A12Q8NGT7 310 aa16.93■□□□□ 0.3
IRF1-211ENST00000613424 ISG20Q96AZ6 181 aaKnown RBP16.93■□□□□ 0.3
IRF1-211ENST00000613424 PHOX2BQ99453 314 aa16.93■□□□□ 0.3
IRF1-211ENST00000613424 MAK16Q9BXY0 300 aaKnown RBP16.93■□□□□ 0.3
IRF1-211ENST00000613424 KCNF1Q9H3M0 494 aa16.93■□□□□ 0.3
IRF1-211ENST00000613424 PDFQ9HBH1 243 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms