RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 AP3B2Q13367 1082 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 TTLL12Q14166 644 aaPredicted RBP5.02□□□□□ -1.61
VPS13D-213ENST00000613099 FAXCQ5TGI0 409 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 XKR5Q6UX68 686 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 TMEM26Q6ZUK4 368 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 USP43Q70EL4 1123 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 ZC3H12CQ9C0D7 883 aaKnown RBP5.02□□□□□ -1.61
VPS13D-213ENST00000613099 KBTBD4Q9NVX7 518 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 GSTK1Q9Y2Q3 226 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 NAV1Q8NEY1 1877 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 MZF1P28698 734 aaPredicted RBP5.02□□□□□ -1.61
VPS13D-213ENST00000613099 DMP1Q13316 513 aaPredicted RBP5.02□□□□□ -1.61
VPS13D-213ENST00000613099 CA9Q16790 459 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 PEX13Q92968 403 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 MYLPFQ96A32 169 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 MMP27Q9H306 513 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 HESX1Q9UBX0 185 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 NDUFAF1Q9Y375 327 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 SDC2P34741 201 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 RFWD3Q6PCD5 774 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 ZNF517Q6ZMY9 492 aaPredicted RBP5.02□□□□□ -1.61
VPS13D-213ENST00000613099 NPLOC4Q8TAT6 608 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 FANK1Q8TC84 345 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 GATA6Q92908 595 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 SLC39A13Q96H72 371 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 DBNDD2Q9BQY9 259 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 DHX33Q9H6R0 707 aaKnown RBP5.02□□□□□ -1.61
VPS13D-213ENST00000613099 OGDHLQ9ULD0 1010 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 RAB4AP20338 218 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 NME3Q13232 169 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 PFKFB3Q16875 520 aaPredicted RBP5.02□□□□□ -1.61
VPS13D-213ENST00000613099 HAGHLQ6PII5 290 aaPredicted RBP5.02□□□□□ -1.61
VPS13D-213ENST00000613099 AFTPHQ6ULP2 937 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 G2E3Q7L622 706 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 P2RY8Q86VZ1 359 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 SEPT12Q8IYM1 358 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 TADA1Q96BN2 335 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 PAFAH2Q99487 392 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 DGKBQ9Y6T7 804 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 FAM237BA0A1B0GVD1 139 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 DHRS12A0PJE2 317 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 E5RI56 91 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 UBDO15205 165 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 STX11O75558 287 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 FUT4P22083 530 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 GUCY1A2P33402 732 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 AP3S2P59780 193 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 SLC27A3Q5K4L6 730 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 FAM228AQ86W67 206 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 DPF3Q92784 378 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 PSD2Q9BQI7 771 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 FICDQ9BVA6 458 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 GFOD1Q9NXC2 390 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 PAK5Q9P286 719 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 PEAK1Q9H792 1746 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 E2F8A0AVK6 867 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 MDM4O15151 490 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 PDE8AO60658 829 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 KCNA6P17658 529 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 RASA1P20936 1047 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 GALNT1Q10472 559 aaPredicted RBP5.02□□□□□ -1.61
VPS13D-213ENST00000613099 PLD1Q13393 1074 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 GPRC6AQ5T6X5 926 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 CACHD1Q5VU97 1274 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 ANKS6Q68DC2 871 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 ZNF431Q8TF32 576 aaPredicted RBP5.02□□□□□ -1.61
VPS13D-213ENST00000613099 GATAD2BQ8WXI9 593 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 TOP1MTQ969P6 601 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 RFT1Q96AA3 541 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 CCDC17Q96LX7 622 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 PHOX2BQ99453 314 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 SPO11Q9Y5K1 396 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 NDUFB9Q9Y6M9 179 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 FAM20BO75063 409 aa5.01□□□□□ -1.61
VPS13D-213ENST00000613099 ATG7O95352 703 aa5.01□□□□□ -1.61
VPS13D-213ENST00000613099 ETV5P41161 510 aa5.01□□□□□ -1.61
VPS13D-213ENST00000613099 GRIA2P42262 883 aa5.01□□□□□ -1.61
VPS13D-213ENST00000613099 MCCD1P59942 119 aaPredicted RBP5.01□□□□□ -1.61
VPS13D-213ENST00000613099 LRRC41Q15345 812 aa5.01□□□□□ -1.61
VPS13D-213ENST00000613099 AGKQ53H12 422 aa5.01□□□□□ -1.61
VPS13D-213ENST00000613099 MCUQ8NE86 351 aa5.01□□□□□ -1.61
VPS13D-213ENST00000613099 PCDHGB4Q9UN71 923 aa5.01□□□□□ -1.61
VPS13D-213ENST00000613099 FARP1Q9Y4F1 1045 aaPredicted RBP5.01□□□□□ -1.61
VPS13D-213ENST00000613099 TESPA1A2RU30 521 aaPredicted RBP5.01□□□□□ -1.61
VPS13D-213ENST00000613099 NEMP1O14524 444 aa5.01□□□□□ -1.61
VPS13D-213ENST00000613099 UGT2B11O75310 529 aa5.01□□□□□ -1.61
VPS13D-213ENST00000613099 SBK2P0C263 348 aa5.01□□□□□ -1.61
VPS13D-213ENST00000613099 PIK3CGP48736 1102 aa5.01□□□□□ -1.61
VPS13D-213ENST00000613099 RPP38P78345 283 aaKnown RBP5.01□□□□□ -1.61
VPS13D-213ENST00000613099 BIKQ13323 160 aa5.01□□□□□ -1.61
VPS13D-213ENST00000613099 PDPK2PQ6A1A2 396 aa5.01□□□□□ -1.61
VPS13D-213ENST00000613099 ZSWIM2Q8NEG5 633 aa5.01□□□□□ -1.61
VPS13D-213ENST00000613099 CENPIQ92674 756 aaPredicted RBP5.01□□□□□ -1.61
VPS13D-213ENST00000613099 RNF25Q96BH1 459 aaPredicted RBP5.01□□□□□ -1.61
VPS13D-213ENST00000613099 C3orf18Q9UK00 162 aa5.01□□□□□ -1.61
VPS13D-213ENST00000613099 RAB23Q9ULC3 237 aa5.01□□□□□ -1.61
VPS13D-213ENST00000613099 MROH5Q6ZUA9 1318 aa5.01□□□□□ -1.61
VPS13D-213ENST00000613099 TRIM38O00635 465 aa5.01□□□□□ -1.61
VPS13D-213ENST00000613099 KELP23276 732 aa5.01□□□□□ -1.61
VPS13D-213ENST00000613099 TMPRSS11AQ6ZMR5 421 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms