RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 RMND1Q9NWS8 449 aa24.04■■□□□ 1.44
MMP28-203ENST00000612672 DDIT4Q9NX09 232 aa24.04■■□□□ 1.44
MMP28-203ENST00000612672 HS3ST4Q9Y661 456 aa24.04■■□□□ 1.44
MMP28-203ENST00000612672 COL12A1Q99715 3063 aa24.04■■□□□ 1.44
MMP28-203ENST00000612672 SMAD6O43541 496 aaKnown RBP24.03■■□□□ 1.44
MMP28-203ENST00000612672 CNTN5O94779 1100 aa24.03■■□□□ 1.44
MMP28-203ENST00000612672 PDCLQ13371 301 aa24.03■■□□□ 1.44
MMP28-203ENST00000612672 FGL2Q14314 439 aa24.03■■□□□ 1.44
MMP28-203ENST00000612672 OTUD1Q5VV17 481 aaPredicted RBP24.03■■□□□ 1.44
MMP28-203ENST00000612672 OR6B2Q6IFH4 312 aa24.03■■□□□ 1.44
MMP28-203ENST00000612672 ABI3BPQ7Z7G0 1075 aa24.03■■□□□ 1.44
MMP28-203ENST00000612672 HORMAD1Q86X24 394 aa24.03■■□□□ 1.44
MMP28-203ENST00000612672 EHBP1Q8NDI1 1231 aa24.03■■□□□ 1.44
MMP28-203ENST00000612672 OR2A12Q8NGT7 310 aa24.03■■□□□ 1.44
MMP28-203ENST00000612672 VCPIP1Q96JH7 1222 aa24.03■■□□□ 1.44
MMP28-203ENST00000612672 DEPDC7Q96QD5 511 aa24.03■■□□□ 1.44
MMP28-203ENST00000612672 THAP9Q9H5L6 903 aa24.03■■□□□ 1.44
MMP28-203ENST00000612672 GPR27Q9NS67 375 aa24.03■■□□□ 1.44
MMP28-203ENST00000612672 VPS28Q9UK41 221 aa24.03■■□□□ 1.44
MMP28-203ENST00000612672 DOCK4Q8N1I0 1966 aa24.03■■□□□ 1.44
MMP28-203ENST00000612672 I6L893 689 aaPredicted RBP24.02■■□□□ 1.44
MMP28-203ENST00000612672 GRAP2O75791 330 aa24.02■■□□□ 1.44
MMP28-203ENST00000612672 KRT5P13647 590 aa24.02■■□□□ 1.44
MMP28-203ENST00000612672 ZNF18P17022 549 aa24.02■■□□□ 1.44
MMP28-203ENST00000612672 LSSP48449 732 aa24.02■■□□□ 1.44
MMP28-203ENST00000612672 CCDC40Q4G0X9 1142 aa24.02■■□□□ 1.44
MMP28-203ENST00000612672 ISM2Q6H9L7 571 aa24.02■■□□□ 1.44
MMP28-203ENST00000612672 WDTC1Q8N5D0 677 aa24.02■■□□□ 1.44
MMP28-203ENST00000612672 KCNE4Q8WWG9 221 aa24.02■■□□□ 1.44
MMP28-203ENST00000612672 ZNF606Q8WXB4 792 aa24.02■■□□□ 1.44
MMP28-203ENST00000612672 GSDMAQ96QA5 445 aa24.02■■□□□ 1.44
MMP28-203ENST00000612672 POLR1BQ9H9Y6 1135 aa24.02■■□□□ 1.44
MMP28-203ENST00000612672 NLGN3Q9NZ94 848 aa24.02■■□□□ 1.44
MMP28-203ENST00000612672 HS3ST2Q9Y278 367 aa24.02■■□□□ 1.44
MMP28-203ENST00000612672 SSUH2Q9Y2M2 353 aa24.02■■□□□ 1.44
MMP28-203ENST00000612672 SNX10Q9Y5X0 201 aa24.02■■□□□ 1.44
MMP28-203ENST00000612672 K7ESM1 405 aa24.01■■□□□ 1.43
MMP28-203ENST00000612672 KPNA3O00505 521 aaPredicted RBP24.01■■□□□ 1.43
MMP28-203ENST00000612672 KLK10O43240 276 aa24.01■■□□□ 1.43
MMP28-203ENST00000612672 LETM1O95202 739 aaPredicted RBP24.01■■□□□ 1.43
MMP28-203ENST00000612672 TGM2P21980 687 aa24.01■■□□□ 1.43
MMP28-203ENST00000612672 HNRNPA2B1P22626 353 aaKnown RBP24.01■■□□□ 1.43
MMP28-203ENST00000612672 RRM1P23921 792 aa24.01■■□□□ 1.43
MMP28-203ENST00000612672 CHRNA3P32297 505 aa24.01■■□□□ 1.43
MMP28-203ENST00000612672 RHDQ02161 417 aa24.01■■□□□ 1.43
MMP28-203ENST00000612672 TMEM259Q4ZIN3 620 aa24.01■■□□□ 1.43
MMP28-203ENST00000612672 TPRG1LQ5T0D9 272 aa24.01■■□□□ 1.43
MMP28-203ENST00000612672 BMFQ96LC9 184 aa24.01■■□□□ 1.43
MMP28-203ENST00000612672 CPXM1Q96SM3 734 aa24.01■■□□□ 1.43
MMP28-203ENST00000612672 SCAND2PQ9GZW5 306 aaPredicted RBP24.01■■□□□ 1.43
MMP28-203ENST00000612672 INTS2Q9H0H0 1204 aaKnown RBP24.01■■□□□ 1.43
MMP28-203ENST00000612672 VPS51Q9UID3 782 aa24.01■■□□□ 1.43
MMP28-203ENST00000612672 KLF15Q9UIH9 416 aa24.01■■□□□ 1.43
MMP28-203ENST00000612672 RAD51BO15315 384 aa24■■□□□ 1.43
MMP28-203ENST00000612672 LZTS3O60299 673 aaPredicted RBP24■■□□□ 1.43
MMP28-203ENST00000612672 CENPBP07199 599 aaPredicted RBP24■■□□□ 1.43
MMP28-203ENST00000612672 CCR1P32246 355 aa24■■□□□ 1.43
MMP28-203ENST00000612672 C5orf22Q49AR2 442 aa24■■□□□ 1.43
MMP28-203ENST00000612672 ALFQ53S48 1182 aa24■■□□□ 1.43
MMP28-203ENST00000612672 ARTNQ5T4W7 220 aa24■■□□□ 1.43
MMP28-203ENST00000612672 TTI2Q6NXR4 508 aa24■■□□□ 1.43
MMP28-203ENST00000612672 GJB7Q6PEY0 223 aa24■■□□□ 1.43
MMP28-203ENST00000612672 FAM181AQ8N9Y4 354 aa24■■□□□ 1.43
MMP28-203ENST00000612672 IFI44Q8TCB0 444 aa24■■□□□ 1.43
MMP28-203ENST00000612672 PRR11Q96HE9 360 aaPredicted RBP24■■□□□ 1.43
MMP28-203ENST00000612672 CEP63Q96MT8 703 aa24■■□□□ 1.43
MMP28-203ENST00000612672 TRIM62Q9BVG3 475 aa24■■□□□ 1.43
MMP28-203ENST00000612672 SATB2Q9UPW6 733 aa24■■□□□ 1.43
MMP28-203ENST00000612672 TBC1D30Q9Y2I9 924 aa24■■□□□ 1.43
MMP28-203ENST00000612672 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.99■■□□□ 1.43
MMP28-203ENST00000612672 POM121BA6NF01 834 aa23.99■■□□□ 1.43
MMP28-203ENST00000612672 SCAMP1O15126 338 aa23.99■■□□□ 1.43
MMP28-203ENST00000612672 P4HA2O15460 535 aa23.99■■□□□ 1.43
MMP28-203ENST00000612672 THAP12O43422 761 aa23.99■■□□□ 1.43
MMP28-203ENST00000612672 PAGE1O75459 146 aa23.99■■□□□ 1.43
MMP28-203ENST00000612672 GP1BAP07359 652 aa23.99■■□□□ 1.43
MMP28-203ENST00000612672 AKT2P31751 481 aa23.99■■□□□ 1.43
MMP28-203ENST00000612672 ERVPABLB-1P60509 514 aa23.99■■□□□ 1.43
MMP28-203ENST00000612672 SKOR1P84550 965 aa23.99■■□□□ 1.43
MMP28-203ENST00000612672 C1QBPQ07021 282 aaKnown RBP23.99■■□□□ 1.43
MMP28-203ENST00000612672 ZNF177Q13360 481 aaPredicted RBP23.99■■□□□ 1.43
MMP28-203ENST00000612672 FZD2Q14332 565 aa23.99■■□□□ 1.43
MMP28-203ENST00000612672 DRAP1Q14919 205 aaPredicted RBP23.99■■□□□ 1.43
MMP28-203ENST00000612672 MEA1Q16626 185 aa23.99■■□□□ 1.43
MMP28-203ENST00000612672 ISXQ2M1V0 245 aa23.99■■□□□ 1.43
MMP28-203ENST00000612672 C3orf38Q5JPI3 329 aa23.99■■□□□ 1.43
MMP28-203ENST00000612672 BROXQ5VW32 411 aa23.99■■□□□ 1.43
MMP28-203ENST00000612672 LINGO4Q6UY18 593 aa23.99■■□□□ 1.43
MMP28-203ENST00000612672 Q6ZSR6 202 aa23.99■■□□□ 1.43
MMP28-203ENST00000612672 PTAR1Q7Z6K3 402 aaPredicted RBP23.99■■□□□ 1.43
MMP28-203ENST00000612672 ZNF683Q8IZ20 524 aa23.99■■□□□ 1.43
MMP28-203ENST00000612672 ZNF548Q8NEK5 533 aaPredicted RBP23.99■■□□□ 1.43
MMP28-203ENST00000612672 GRIN3AQ8TCU5 1115 aa23.99■■□□□ 1.43
MMP28-203ENST00000612672 SNRNP27Q8WVK2 155 aaKnown RBP23.99■■□□□ 1.43
MMP28-203ENST00000612672 WBP1Q96G27 269 aa23.99■■□□□ 1.43
MMP28-203ENST00000612672 MED15Q96RN5 788 aa23.99■■□□□ 1.43
MMP28-203ENST00000612672 TNKS2Q9H2K2 1166 aa23.99■■□□□ 1.43
MMP28-203ENST00000612672 DNAJC28Q9NX36 388 aa23.99■■□□□ 1.43
MMP28-203ENST00000612672 SLC12A6Q9UHW9 1150 aa23.99■■□□□ 1.43
MMP28-203ENST00000612672 SPTA1P02549 2419 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms