RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 LDB1Q86U70 411 aaPredicted RBP14.3□□□□□ -0.12
COL6A1-207ENST00000612273 MFN1Q8IWA4 741 aa14.3□□□□□ -0.12
COL6A1-207ENST00000612273 FSTL5Q8N475 847 aaPredicted RBP14.3□□□□□ -0.12
COL6A1-207ENST00000612273 KYQ8NBH2 561 aa14.3□□□□□ -0.12
COL6A1-207ENST00000612273 OR6J1Q8NGC5 347 aa14.3□□□□□ -0.12
COL6A1-207ENST00000612273 RAB3IL1Q8TBN0 382 aa14.3□□□□□ -0.12
COL6A1-207ENST00000612273 TMEM30AQ9NV96 361 aa14.3□□□□□ -0.12
COL6A1-207ENST00000612273 DNAJC28Q9NX36 388 aa14.3□□□□□ -0.12
COL6A1-207ENST00000612273 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.3□□□□□ -0.12
COL6A1-207ENST00000612273 LCTP09848 1927 aa14.3□□□□□ -0.12
COL6A1-207ENST00000612273 MYBPHLA2RUH7 354 aa14.3□□□□□ -0.12
COL6A1-207ENST00000612273 H3BNX3 289 aa14.3□□□□□ -0.12
COL6A1-207ENST00000612273 DNAJA2O60884 412 aa14.3□□□□□ -0.12
COL6A1-207ENST00000612273 HARS2P49590 506 aaKnown RBP14.3□□□□□ -0.12
COL6A1-207ENST00000612273 TAF6P49848 677 aa14.3□□□□□ -0.12
COL6A1-207ENST00000612273 CEACAM7Q14002 265 aa14.3□□□□□ -0.12
COL6A1-207ENST00000612273 CYLC2Q14093 348 aaPredicted RBP14.3□□□□□ -0.12
COL6A1-207ENST00000612273 DGKDQ16760 1214 aa14.3□□□□□ -0.12
COL6A1-207ENST00000612273 FAM187BQ17R55 369 aa14.3□□□□□ -0.12
COL6A1-207ENST00000612273 NOL9Q5SY16 702 aaKnown RBP14.3□□□□□ -0.12
COL6A1-207ENST00000612273 ACAD11Q709F0 780 aa14.3□□□□□ -0.12
COL6A1-207ENST00000612273 ERO1BQ86YB8 467 aa14.3□□□□□ -0.12
COL6A1-207ENST00000612273 PQLC1Q8N2U9 271 aa14.3□□□□□ -0.12
COL6A1-207ENST00000612273 SREK1Q8WXA9 508 aaKnown RBP14.3□□□□□ -0.12
COL6A1-207ENST00000612273 WNT8BQ93098 351 aa14.3□□□□□ -0.12
COL6A1-207ENST00000612273 C11orf84Q9BUA3 381 aaPredicted RBP14.3□□□□□ -0.12
COL6A1-207ENST00000612273 PLEKHA5Q9HAU0 1116 aa14.3□□□□□ -0.12
COL6A1-207ENST00000612273 DNAJC25-GNG10A0A024R161 153 aa14.29□□□□□ -0.12
COL6A1-207ENST00000612273 A0A0G2JLL6 359 aaPredicted RBP14.29□□□□□ -0.12
COL6A1-207ENST00000612273 LILRA4P59901 499 aa14.29□□□□□ -0.12
COL6A1-207ENST00000612273 ESRP1Q6NXG1 681 aaKnown RBP14.29□□□□□ -0.12
COL6A1-207ENST00000612273 NOTUMQ6P988 496 aa14.29□□□□□ -0.12
COL6A1-207ENST00000612273 BNC2Q6ZN30 1099 aaPredicted RBP14.29□□□□□ -0.12
COL6A1-207ENST00000612273 STRADAQ7RTN6 431 aa14.29□□□□□ -0.12
COL6A1-207ENST00000612273 PRRT2Q7Z6L0 340 aaPredicted RBP14.29□□□□□ -0.12
COL6A1-207ENST00000612273 ZNF354CQ86Y25 554 aa14.29□□□□□ -0.12
COL6A1-207ENST00000612273 NT5DC4Q86YG4 428 aa14.29□□□□□ -0.12
COL6A1-207ENST00000612273 TRAPPC9Q96Q05 1148 aa14.29□□□□□ -0.12
COL6A1-207ENST00000612273 SLC39A3Q9BRY0 314 aa14.29□□□□□ -0.12
COL6A1-207ENST00000612273 UBE2OQ9C0C9 1292 aaKnown RBP14.29□□□□□ -0.12
COL6A1-207ENST00000612273 TKTL2Q9H0I9 626 aa14.29□□□□□ -0.12
COL6A1-207ENST00000612273 CCDC167Q9P0B6 97 aa14.29□□□□□ -0.12
COL6A1-207ENST00000612273 OR12D3Q9UGF7 316 aa14.29□□□□□ -0.12
COL6A1-207ENST00000612273 UBQLN1Q9UMX0 589 aaKnown RBP14.29□□□□□ -0.12
COL6A1-207ENST00000612273 PTPRFP10586 1907 aa14.29□□□□□ -0.12
COL6A1-207ENST00000612273 ANKRD12Q6UB98 2062 aa14.29□□□□□ -0.12
COL6A1-207ENST00000612273 TTC24A2A3L6 582 aaPredicted RBP14.29□□□□□ -0.12
COL6A1-207ENST00000612273 MLNP12872 115 aa14.29□□□□□ -0.12
COL6A1-207ENST00000612273 SMPD1P17405 629 aa14.29□□□□□ -0.12
COL6A1-207ENST00000612273 DPP6P42658 865 aa14.29□□□□□ -0.12
COL6A1-207ENST00000612273 MTTPP55157 894 aa14.29□□□□□ -0.12
COL6A1-207ENST00000612273 CSHL1Q14406 222 aa14.29□□□□□ -0.12
COL6A1-207ENST00000612273 R3HDM1Q15032 1099 aaKnown RBP14.29□□□□□ -0.12
COL6A1-207ENST00000612273 SPANXN3Q5MJ09 141 aa14.29□□□□□ -0.12
COL6A1-207ENST00000612273 SH2D4BQ5SQS7 431 aa14.29□□□□□ -0.12
COL6A1-207ENST00000612273 C4orf22Q6V702 233 aa14.29□□□□□ -0.12
COL6A1-207ENST00000612273 RYBPQ8N488 228 aaPredicted RBP14.29□□□□□ -0.12
COL6A1-207ENST00000612273 APBB2Q92870 758 aa14.29□□□□□ -0.12
COL6A1-207ENST00000612273 LPPQ93052 612 aa14.29□□□□□ -0.12
COL6A1-207ENST00000612273 GORASP1Q9BQQ3 440 aa14.29□□□□□ -0.12
COL6A1-207ENST00000612273 DDX43Q9NXZ2 648 aaKnown RBP14.29□□□□□ -0.12
COL6A1-207ENST00000612273 UBAP1Q9NZ09 502 aa14.29□□□□□ -0.12
COL6A1-207ENST00000612273 GMPR2Q9P2T1 348 aaKnown RBP14.29□□□□□ -0.12
COL6A1-207ENST00000612273 MTF2Q9Y483 593 aaPredicted RBP14.29□□□□□ -0.12
COL6A1-207ENST00000612273 PDE4DIPQ5VU43 2346 aa14.28□□□□□ -0.12
COL6A1-207ENST00000612273 ASB14A6NK59 587 aa14.28□□□□□ -0.12
COL6A1-207ENST00000612273 KCNU1A8MYU2 1149 aa14.28□□□□□ -0.12
COL6A1-207ENST00000612273 AHSGP02765 367 aa14.28□□□□□ -0.12
COL6A1-207ENST00000612273 NPR3P17342 541 aa14.28□□□□□ -0.12
COL6A1-207ENST00000612273 PTPN1P18031 435 aaKnown RBP14.28□□□□□ -0.12
COL6A1-207ENST00000612273 NOS2P35228 1153 aa14.28□□□□□ -0.12
COL6A1-207ENST00000612273 RPL14P50914 215 aaKnown RBP14.28□□□□□ -0.12
COL6A1-207ENST00000612273 CCDC153Q494R4 210 aa14.28□□□□□ -0.12
COL6A1-207ENST00000612273 FBXO48Q5FWF7 155 aa14.28□□□□□ -0.12
COL6A1-207ENST00000612273 KIAA0319Q5VV43 1072 aa14.28□□□□□ -0.12
COL6A1-207ENST00000612273 AAGABQ6PD74 315 aa14.28□□□□□ -0.12
COL6A1-207ENST00000612273 CLEC20AQ6ZU45 233 aa14.28□□□□□ -0.12
COL6A1-207ENST00000612273 ZDHHC17Q8IUH5 632 aa14.28□□□□□ -0.12
COL6A1-207ENST00000612273 CEP97Q8IW35 865 aa14.28□□□□□ -0.12
COL6A1-207ENST00000612273 MPP4Q96JB8 637 aa14.28□□□□□ -0.12
COL6A1-207ENST00000612273 ELMO2Q96JJ3 720 aa14.28□□□□□ -0.12
COL6A1-207ENST00000612273 WDR41Q9HAD4 459 aa14.28□□□□□ -0.12
COL6A1-207ENST00000612273 SORCS3Q9UPU3 1222 aa14.28□□□□□ -0.12
COL6A1-207ENST00000612273 HDAC3O15379 428 aa14.28□□□□□ -0.12
COL6A1-207ENST00000612273 AP2A1O95782 977 aa14.28□□□□□ -0.12
COL6A1-207ENST00000612273 RPL10P27635 214 aaKnown RBP14.28□□□□□ -0.12
COL6A1-207ENST00000612273 CHN2P52757 468 aa14.28□□□□□ -0.12
COL6A1-207ENST00000612273 RBM44Q6ZP01 1051 aaKnown RBP14.28□□□□□ -0.12
COL6A1-207ENST00000612273 AMIGO2Q86SJ2 522 aa14.28□□□□□ -0.12
COL6A1-207ENST00000612273 TTC39CQ8N584 583 aa14.28□□□□□ -0.12
COL6A1-207ENST00000612273 ATP6V1E2Q96A05 226 aa14.28□□□□□ -0.12
COL6A1-207ENST00000612273 SLC45A3Q96JT2 553 aa14.28□□□□□ -0.12
COL6A1-207ENST00000612273 TNIP3Q96KP6 325 aa14.28□□□□□ -0.12
COL6A1-207ENST00000612273 WDCPQ9H6R7 721 aa14.28□□□□□ -0.12
COL6A1-207ENST00000612273 AP4B1Q9Y6B7 739 aa14.28□□□□□ -0.12
COL6A1-207ENST00000612273 HACD1B0YJ81 288 aa14.28□□□□□ -0.12
COL6A1-207ENST00000612273 TPST1O60507 370 aa14.28□□□□□ -0.12
COL6A1-207ENST00000612273 THRAP10827 490 aa14.28□□□□□ -0.12
COL6A1-207ENST00000612273 SLC5A9Q2M3M2 681 aa14.28□□□□□ -0.12
COL6A1-207ENST00000612273 ARHGAP17Q68EM7 881 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms