RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 PPARGC1AQ9UBK2 798 aaKnown RBP9.05□□□□□ -0.96
SMAD4-217ENST00000611848 IP6K2Q9UHH9 426 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 GGA2Q9UJY4 613 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 FBXO4Q9UKT5 387 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.05□□□□□ -0.96
SMAD4-217ENST00000611848 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.05□□□□□ -0.96
SMAD4-217ENST00000611848 E9PAM4 449 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 PABPC1P11940 636 aaKnown RBP9.05□□□□□ -0.96
SMAD4-217ENST00000611848 HNRNPLP14866 589 aaKnown RBP eCLIP9.05□□□□□ -0.966e-10■■■□□ 17.8
SMAD4-217ENST00000611848 PCK1P35558 622 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 MLLT3P42568 568 aaPredicted RBP9.05□□□□□ -0.96
SMAD4-217ENST00000611848 DHX9Q08211 1270 aaKnown RBP9.05□□□□□ -0.96
SMAD4-217ENST00000611848 ZNF844Q08AG5 666 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 ZNF252P-AS1Q0IIN9 211 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 LMAN2Q12907 356 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 KLF1Q13351 362 aaPredicted RBP9.05□□□□□ -0.96
SMAD4-217ENST00000611848 ZNF177Q13360 481 aaPredicted RBP9.05□□□□□ -0.96
SMAD4-217ENST00000611848 SLC12A1Q13621 1099 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 DMC1Q14565 340 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 ANGPT1Q15389 498 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 GEN1Q17RS7 908 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 C2orf27AQ580R0 203 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 KDM7AQ6ZMT4 941 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 LEKR1Q6ZMV7 388 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 SYDE1Q6ZW31 735 aaPredicted RBP9.05□□□□□ -0.96
SMAD4-217ENST00000611848 SYT13Q7L8C5 426 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 PSTKQ8IV42 348 aaKnown RBP9.05□□□□□ -0.96
SMAD4-217ENST00000611848 SFTPA1Q8IWL2 248 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 ZNF683Q8IZ20 524 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 CCDC185Q8N715 623 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 NIPA2Q8N8Q9 360 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 IL17RCQ8NAC3 791 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 WFDC5Q8TCV5 224 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 LMLNQ96KR4 655 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 TRIM31Q9BZY9 425 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 TMPRSS4Q9NRS4 437 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 ABCB8Q9NUT2 735 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 ELOVL2Q9NXB9 296 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 OR12D3Q9UGF7 316 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 FZD10Q9ULW2 581 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 MMP17Q9ULZ9 603 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 SNX24Q9Y343 169 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 NUP205Q92621 2012 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 FANCMQ8IYD8 2048 aa9.04□□□□□ -0.96
SMAD4-217ENST00000611848 PRPSAP2O60256 369 aa9.04□□□□□ -0.96
SMAD4-217ENST00000611848 LRCH4O75427 683 aa9.04□□□□□ -0.96
SMAD4-217ENST00000611848 ATP5BP06576 529 aaKnown RBP9.04□□□□□ -0.96
SMAD4-217ENST00000611848 NUDT17P0C025 328 aa9.04□□□□□ -0.96
SMAD4-217ENST00000611848 MYZAPP0CAP1 466 aa9.04□□□□□ -0.96
SMAD4-217ENST00000611848 POLR2EP19388 210 aaKnown RBP9.04□□□□□ -0.96
SMAD4-217ENST00000611848 COL9A1P20849 921 aa9.04□□□□□ -0.96
SMAD4-217ENST00000611848 MIPP30301 263 aa9.04□□□□□ -0.96
SMAD4-217ENST00000611848 NTSR1P30989 418 aa9.04□□□□□ -0.96
SMAD4-217ENST00000611848 L1CAMP32004 1257 aa9.04□□□□□ -0.96
SMAD4-217ENST00000611848 CD70P32970 193 aa9.04□□□□□ -0.96
SMAD4-217ENST00000611848 RPL21P46778 160 aaKnown RBP9.04□□□□□ -0.96
SMAD4-217ENST00000611848 PTPN5P54829 565 aa9.04□□□□□ -0.96
SMAD4-217ENST00000611848 HNRNPH2P55795 449 aaKnown RBP9.04□□□□□ -0.96
SMAD4-217ENST00000611848 EIF3BP55884 814 aaKnown RBP9.04□□□□□ -0.96
SMAD4-217ENST00000611848 TAS2R40P59535 323 aa9.04□□□□□ -0.96
SMAD4-217ENST00000611848 SATB1Q01826 763 aa9.04□□□□□ -0.96
SMAD4-217ENST00000611848 ZSCAN26Q16670 478 aa9.04□□□□□ -0.96
SMAD4-217ENST00000611848 ZNF528Q3MIS6 628 aa9.04□□□□□ -0.96
SMAD4-217ENST00000611848 EOGTQ5NDL2 527 aa9.04□□□□□ -0.96
SMAD4-217ENST00000611848 CEP85LQ5SZL2 805 aa9.04□□□□□ -0.96
SMAD4-217ENST00000611848 ERMARDQ5T6L9 678 aa9.04□□□□□ -0.96
SMAD4-217ENST00000611848 MANEALQ5VSG8 457 aa9.04□□□□□ -0.96
SMAD4-217ENST00000611848 LRRC38Q5VT99 294 aa9.04□□□□□ -0.96
SMAD4-217ENST00000611848 MBLAC2Q68D91 279 aa9.04□□□□□ -0.96
SMAD4-217ENST00000611848 SDE2Q6IQ49 451 aa9.04□□□□□ -0.96
SMAD4-217ENST00000611848 PKN3Q6P5Z2 889 aa9.04□□□□□ -0.96
SMAD4-217ENST00000611848 SETD3Q86TU7 594 aaPredicted RBP9.04□□□□□ -0.96
SMAD4-217ENST00000611848 ADIPOR2Q86V24 386 aa9.04□□□□□ -0.96
SMAD4-217ENST00000611848 CAMKK1Q8N5S9 505 aa9.04□□□□□ -0.96
SMAD4-217ENST00000611848 ALLCQ8N6M5 410 aa9.04□□□□□ -0.96
SMAD4-217ENST00000611848 ARFGAP1Q8N6T3 406 aa9.04□□□□□ -0.96
SMAD4-217ENST00000611848 EXD1Q8NHP7 514 aa9.04□□□□□ -0.96
SMAD4-217ENST00000611848 ART4Q93070 314 aa9.04□□□□□ -0.96
SMAD4-217ENST00000611848 EPAS1Q99814 870 aa9.04□□□□□ -0.96
SMAD4-217ENST00000611848 FAM126AQ9BYI3 521 aaPredicted RBP9.04□□□□□ -0.96
SMAD4-217ENST00000611848 ZYG11BQ9C0D3 744 aa9.04□□□□□ -0.96
SMAD4-217ENST00000611848 HOMER3Q9NSC5 361 aa9.04□□□□□ -0.96
SMAD4-217ENST00000611848 THAP10Q9P2Z0 257 aaPredicted RBP9.04□□□□□ -0.96
SMAD4-217ENST00000611848 SLC8A2Q9UPR5 921 aa9.04□□□□□ -0.96
SMAD4-217ENST00000611848 TBC1D30Q9Y2I9 924 aa9.04□□□□□ -0.96
SMAD4-217ENST00000611848 SNX10Q9Y5X0 201 aa9.04□□□□□ -0.96
SMAD4-217ENST00000611848 CHD5Q8TDI0 1954 aa9.04□□□□□ -0.96
SMAD4-217ENST00000611848 CNTN5O94779 1100 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 LRIG2O94898 1065 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 KLF8O95600 359 aaPredicted RBP9.03□□□□□ -0.96
SMAD4-217ENST00000611848 ECEL1O95672 775 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 ASLP04424 464 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 IVLP07476 585 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 HOXA6P31267 233 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 HTR7P34969 479 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 IRAK1P51617 712 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 ZNF135P52742 658 aaPredicted RBP9.03□□□□□ -0.96
SMAD4-217ENST00000611848 PLK1P53350 603 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 NRLP54845 237 aa9.03□□□□□ -0.96
SMAD4-217ENST00000611848 PLTPP55058 493 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms