RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 OTUD1Q5VV17 481 aaPredicted RBP15.38■□□□□ 0.05
PCDHGB1-202ENST00000611598 LIPMQ5VYY2 423 aa15.38■□□□□ 0.05
PCDHGB1-202ENST00000611598 KCNMB4Q86W47 210 aa15.38■□□□□ 0.05
PCDHGB1-202ENST00000611598 DEFB106AQ8N104 65 aa15.38■□□□□ 0.05
PCDHGB1-202ENST00000611598 CEP70Q8NHQ1 597 aa15.38■□□□□ 0.05
PCDHGB1-202ENST00000611598 SREK1Q8WXA9 508 aaKnown RBP15.38■□□□□ 0.05
PCDHGB1-202ENST00000611598 UPF1Q92900 1129 aaKnown RBP eCLIP15.38■□□□□ 0.05
PCDHGB1-202ENST00000611598 SUDS3Q9H7L9 328 aaPredicted RBP15.38■□□□□ 0.05
PCDHGB1-202ENST00000611598 LIN28AQ9H9Z2 209 aaKnown RBP15.38■□□□□ 0.05
PCDHGB1-202ENST00000611598 C20orf96Q9NUD7 363 aaPredicted RBP15.38■□□□□ 0.05
PCDHGB1-202ENST00000611598 CDYLQ9Y232 598 aa15.38■□□□□ 0.05
PCDHGB1-202ENST00000611598 BTBD19C9JJ37 291 aa15.38■□□□□ 0.05
PCDHGB1-202ENST00000611598 HBP1O60381 514 aa15.38■□□□□ 0.05
PCDHGB1-202ENST00000611598 CAPNS1P04632 268 aa15.38■□□□□ 0.05
PCDHGB1-202ENST00000611598 MGAT5BQ3V5L5 792 aa15.38■□□□□ 0.05
PCDHGB1-202ENST00000611598 GLRA4Q5JXX5 417 aa15.38■□□□□ 0.05
PCDHGB1-202ENST00000611598 ZYG11AQ6WRX3 759 aa15.38■□□□□ 0.05
PCDHGB1-202ENST00000611598 SPNS2Q8IVW8 549 aa15.38■□□□□ 0.05
PCDHGB1-202ENST00000611598 TTC39CQ8N584 583 aa15.38■□□□□ 0.05
PCDHGB1-202ENST00000611598 KCTD4Q8WVF5 259 aa15.38■□□□□ 0.05
PCDHGB1-202ENST00000611598 NLRP7Q8WX94 980 aa15.38■□□□□ 0.05
PCDHGB1-202ENST00000611598 C1QTNF1Q9BXJ1 281 aa15.38■□□□□ 0.05
PCDHGB1-202ENST00000611598 NFKBIZQ9BYH8 718 aa15.38■□□□□ 0.05
PCDHGB1-202ENST00000611598 PCDHAC1Q9H158 963 aa15.38■□□□□ 0.05
PCDHGB1-202ENST00000611598 PFDN1O60925 122 aa15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 H2AFYO75367 372 aaKnown RBP15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 AP2A1O95782 977 aa15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 INSRRP14616 1297 aa15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 LMO2P25791 158 aa15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 PTPN3P26045 913 aa15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 GALK1P51570 392 aa15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 EMP3P54852 163 aa15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 NR1H2P55055 460 aa15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 CREB5Q02930 508 aa15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 BST2Q10589 180 aaKnown RBP15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 ZNF460Q14592 562 aa15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 DCAF6Q58WW2 860 aa15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 GK5Q6ZS86 529 aa15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 STRADAQ7RTN6 431 aa15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 RIOX2Q8IUF8 465 aa15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 CHERPQ8IWX8 916 aaKnown RBP15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 SPATA6LQ8N4H0 392 aa15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 PCDH20Q8N6Y1 951 aaKnown RBP15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 EME1Q96AY2 570 aa15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 C18orf25Q96B23 403 aaPredicted RBP15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 KLRG1Q96E93 195 aa15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 SCYL1Q96KG9 808 aa15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 MCMBPQ9BTE3 642 aa15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 ADA2Q9NZK5 511 aa15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 BFARQ9NZS9 450 aa15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 CITO14578 2027 aa15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 FAM72CH0Y354 149 aa15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 TRMUO75648 421 aaKnown RBP15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 PSMC3P17980 439 aa15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 PTK2BQ14289 1009 aa15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 GJC2Q5T442 439 aaPredicted RBP15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 FAM72AQ5TYM5 149 aa15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 FAM72DQ6L9T8 149 aa15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 FAM72BQ86X60 149 aa15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 PSTKQ8IV42 348 aaKnown RBP15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 NUP93Q8N1F7 819 aa15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 DLG3Q92796 817 aa15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 SPATC1LQ9H0A9 340 aa15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 SMARCAD1Q9H4L7 1026 aa15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 COQ10BQ9H8M1 238 aa15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 EFCAB1Q9HAE3 211 aa15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 UBP1Q9NZI7 540 aa15.37■□□□□ 0.05
PCDHGB1-202ENST00000611598 ARHGAP10A1A4S6 786 aa15.36■□□□□ 0.05
PCDHGB1-202ENST00000611598 KCNU1A8MYU2 1149 aa15.36■□□□□ 0.05
PCDHGB1-202ENST00000611598 ZBTB24O43167 697 aaPredicted RBP15.36■□□□□ 0.05
PCDHGB1-202ENST00000611598 TSPAN1O60635 241 aa15.36■□□□□ 0.05
PCDHGB1-202ENST00000611598 NMBRP28336 390 aa15.36■□□□□ 0.05
PCDHGB1-202ENST00000611598 MATKP42679 507 aa15.36■□□□□ 0.05
PCDHGB1-202ENST00000611598 HSPA13P48723 471 aa15.36■□□□□ 0.05
PCDHGB1-202ENST00000611598 PRKAA1Q13131 559 aa15.36■□□□□ 0.05
PCDHGB1-202ENST00000611598 SH2D4BQ5SQS7 431 aa15.36■□□□□ 0.05
PCDHGB1-202ENST00000611598 ZNF618Q5T7W0 954 aa15.36■□□□□ 0.05
PCDHGB1-202ENST00000611598 KLC3Q6P597 504 aa15.36■□□□□ 0.05
PCDHGB1-202ENST00000611598 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.36■□□□□ 0.05
PCDHGB1-202ENST00000611598 ANKRD52Q8NB46 1076 aa15.36■□□□□ 0.05
PCDHGB1-202ENST00000611598 DDI1Q8WTU0 396 aa15.36■□□□□ 0.05
PCDHGB1-202ENST00000611598 LRTOMTQ8WZ04 291 aa15.36■□□□□ 0.05
PCDHGB1-202ENST00000611598 MLPHQ9BV36 600 aaPredicted RBP15.36■□□□□ 0.05
PCDHGB1-202ENST00000611598 MAF1Q9H063 256 aa15.36■□□□□ 0.05
PCDHGB1-202ENST00000611598 PDGFCQ9NRA1 345 aa15.36■□□□□ 0.05
PCDHGB1-202ENST00000611598 EPS15L1Q9UBC2 864 aa15.36■□□□□ 0.05
PCDHGB1-202ENST00000611598 GJD2Q9UKL4 321 aa15.36■□□□□ 0.05
PCDHGB1-202ENST00000611598 A0A0G2JMZ2 1700 aa15.36■□□□□ 0.05
PCDHGB1-202ENST00000611598 LRRC37A2A6NM11 1700 aa15.36■□□□□ 0.05
PCDHGB1-202ENST00000611598 TADA2AO75478 443 aa15.36■□□□□ 0.05
PCDHGB1-202ENST00000611598 CD68P34810 354 aaPredicted RBP15.36■□□□□ 0.05
PCDHGB1-202ENST00000611598 BCAT1P54687 386 aa15.36■□□□□ 0.05
PCDHGB1-202ENST00000611598 SNX16P57768 344 aa15.36■□□□□ 0.05
PCDHGB1-202ENST00000611598 NME3Q13232 169 aa15.36■□□□□ 0.05
PCDHGB1-202ENST00000611598 SLC25A52Q3SY17 297 aa15.36■□□□□ 0.05
PCDHGB1-202ENST00000611598 FAM219BQ5XKK7 198 aa15.36■□□□□ 0.05
PCDHGB1-202ENST00000611598 ARHGAP17Q68EM7 881 aa15.36■□□□□ 0.05
PCDHGB1-202ENST00000611598 BORAQ6PGQ7 559 aa15.36■□□□□ 0.05
PCDHGB1-202ENST00000611598 SETD3Q86TU7 594 aaPredicted RBP15.36■□□□□ 0.05
PCDHGB1-202ENST00000611598 FSTL5Q8N475 847 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms