RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 FRMD8Q9BZ67 464 aaPredicted RBP4.65□□□□□ -1.67
SMCHD1-213ENST00000609587 INTS2Q9H0H0 1204 aaKnown RBP4.65□□□□□ -1.67
SMCHD1-213ENST00000609587 PREBQ9HCU5 417 aa4.65□□□□□ -1.67
SMCHD1-213ENST00000609587 NRIP3Q9NQ35 241 aa4.65□□□□□ -1.67
SMCHD1-213ENST00000609587 BTBD3Q9Y2F9 522 aa4.65□□□□□ -1.67
SMCHD1-213ENST00000609587 CYP46A1Q9Y6A2 500 aa4.65□□□□□ -1.67
SMCHD1-213ENST00000609587 F8W810 466 aa4.64□□□□□ -1.67
SMCHD1-213ENST00000609587 TP73O15350 636 aa4.64□□□□□ -1.67
SMCHD1-213ENST00000609587 BCAR3O75815 825 aa4.64□□□□□ -1.67
SMCHD1-213ENST00000609587 TNFAIP3P21580 790 aa4.64□□□□□ -1.67
SMCHD1-213ENST00000609587 KLRC2P26717 231 aa4.64□□□□□ -1.67
SMCHD1-213ENST00000609587 GGT5P36269 586 aa4.64□□□□□ -1.67
SMCHD1-213ENST00000609587 SKIV2L2P42285 1042 aaKnown RBP4.64□□□□□ -1.67
SMCHD1-213ENST00000609587 PAFAH1B1P43034 410 aa4.64□□□□□ -1.67
SMCHD1-213ENST00000609587 CDH15P55291 814 aa4.64□□□□□ -1.67
SMCHD1-213ENST00000609587 ZNF91Q05481 1191 aa4.64□□□□□ -1.67
SMCHD1-213ENST00000609587 PLK5Q496M5 336 aa4.64□□□□□ -1.67
SMCHD1-213ENST00000609587 KLHL22Q53GT1 634 aa4.64□□□□□ -1.67
SMCHD1-213ENST00000609587 MORN5Q5VZ52 161 aa4.64□□□□□ -1.67
SMCHD1-213ENST00000609587 ZNF626Q68DY1 528 aa4.64□□□□□ -1.67
SMCHD1-213ENST00000609587 NAPEPLDQ6IQ20 393 aa4.64□□□□□ -1.67
SMCHD1-213ENST00000609587 ACAD10Q6JQN1 1059 aa4.64□□□□□ -1.67
SMCHD1-213ENST00000609587 MAATS1Q7Z4T9 603 aa4.64□□□□□ -1.67
SMCHD1-213ENST00000609587 TBC1D22AQ8WUA7 517 aa4.64□□□□□ -1.67
SMCHD1-213ENST00000609587 CNOT9Q92600 299 aaKnown RBP4.64□□□□□ -1.67
SMCHD1-213ENST00000609587 CUL5Q93034 780 aa4.64□□□□□ -1.67
SMCHD1-213ENST00000609587 ZUFSPQ96AP4 578 aa4.64□□□□□ -1.67
SMCHD1-213ENST00000609587 ELP4Q96EB1 424 aa4.64□□□□□ -1.67
SMCHD1-213ENST00000609587 SIGLEC11Q96RL6 698 aa4.64□□□□□ -1.67
SMCHD1-213ENST00000609587 EYA3Q99504 573 aa4.64□□□□□ -1.67
SMCHD1-213ENST00000609587 IFT27Q9BW83 186 aa4.64□□□□□ -1.67
SMCHD1-213ENST00000609587 PRSS22Q9GZN4 317 aa4.64□□□□□ -1.67
SMCHD1-213ENST00000609587 LMAN2LQ9H0V9 348 aa4.64□□□□□ -1.67
SMCHD1-213ENST00000609587 ZHX3Q9H4I2 956 aa4.64□□□□□ -1.67
SMCHD1-213ENST00000609587 TMEM45AQ9NWC5 275 aa4.64□□□□□ -1.67
SMCHD1-213ENST00000609587 IRAK4Q9NWZ3 460 aa4.64□□□□□ -1.67
SMCHD1-213ENST00000609587 HDAC6Q9UBN7 1215 aa4.64□□□□□ -1.67
SMCHD1-213ENST00000609587 UTS2RQ9UKP6 389 aa4.64□□□□□ -1.67
SMCHD1-213ENST00000609587 LAMP3Q9UQV4 416 aa4.64□□□□□ -1.67
SMCHD1-213ENST00000609587 ZNF335Q9H4Z2 1342 aaPredicted RBP4.64□□□□□ -1.67
SMCHD1-213ENST00000609587 GOLGA6L10A0A0M3HER8 536 aa4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 OR6C68A6NDL8 312 aa4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 KCNU1A8MYU2 1149 aa4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 RHODO00212 210 aa4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 TNPO2O14787 897 aaKnown RBP4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 TSPAN4O14817 238 aa4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 PER2O15055 1255 aa4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 MBD4O95243 580 aa4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 CBX6O95503 412 aa4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 WNT1P04628 370 aa4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 LCKP06239 509 aa4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 CHRM4P08173 479 aa4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 CTSAP10619 480 aa4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 CD72P21854 359 aa4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 ID2Q02363 134 aa4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 PMPCAQ10713 525 aa4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 CAMK1Q14012 370 aa4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 RALBP1Q15311 655 aa4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 SLC18A3Q16572 532 aa4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 SUPT20HL1Q3ZLR7 823 aa4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 UBAP2Q5T6F2 1119 aaKnown RBP4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 TMEM268Q5VZI3 342 aa4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 ISM2Q6H9L7 571 aa4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 ZNF793Q6ZN11 406 aa4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 RSRC2Q7L4I2 434 aaKnown RBP4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 IGFN1Q86VF2 1251 aa4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 CCDC25Q86WR0 208 aa4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 GHDCQ8N2G8 530 aa4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 SETD9Q8NE22 299 aa4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 PPHLN1Q8NEY8 458 aaKnown RBP4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 TNIP2Q8NFZ5 429 aa4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 ZCCHC10Q8TBK6 192 aa4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 NOC3LQ8WTT2 800 aaKnown RBP4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 RAB40AQ8WXH6 277 aa4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 CLMNQ96JQ2 1002 aa4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 FRG2BQ96QU4 278 aa4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 CLSTN3Q9BQT9 956 aa4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 TUBB6Q9BUF5 446 aa4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 EPHX3Q9H6B9 360 aa4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 ZNF304Q9HCX3 659 aa4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 PAPOLBQ9NRJ5 636 aaKnown RBP4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 BEX4Q9NWD9 120 aaPredicted RBP4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 PNMA2Q9UL42 364 aa4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 ICKQ9UPZ9 632 aa4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 OSGIN2Q9Y236 505 aa4.63□□□□□ -1.67
SMCHD1-213ENST00000609587 PRPF4O43172 522 aaKnown RBP eCLIP4.62□□□□□ -1.67
SMCHD1-213ENST00000609587 NEURL1O76050 574 aa4.62□□□□□ -1.67
SMCHD1-213ENST00000609587 CD4P01730 458 aa4.62□□□□□ -1.67
SMCHD1-213ENST00000609587 ABCD3P28288 659 aa4.62□□□□□ -1.67
SMCHD1-213ENST00000609587 PTPN9P43378 593 aa4.62□□□□□ -1.67
SMCHD1-213ENST00000609587 CASP6P55212 293 aa4.62□□□□□ -1.67
SMCHD1-213ENST00000609587 MIDNQ504T8 468 aa4.62□□□□□ -1.67
SMCHD1-213ENST00000609587 ALG10Q5BKT4 473 aa4.62□□□□□ -1.67
SMCHD1-213ENST00000609587 ALG10BQ5I7T1 473 aa4.62□□□□□ -1.67
SMCHD1-213ENST00000609587 TTC39AQ5SRH9 613 aa4.62□□□□□ -1.67
SMCHD1-213ENST00000609587 FAM69AQ5T7M9 428 aa4.62□□□□□ -1.67
SMCHD1-213ENST00000609587 TTLL5Q6EMB2 1281 aa4.62□□□□□ -1.67
SMCHD1-213ENST00000609587 FAAH2Q6GMR7 532 aa4.62□□□□□ -1.67
SMCHD1-213ENST00000609587 MON1AQ86VX9 555 aa4.62□□□□□ -1.67
SMCHD1-213ENST00000609587 DDIASQ8IXT1 998 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms