RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 UBAP2LQ14157 1087 aaKnown RBP13.25□□□□□ -0.29
USP6NL-205ENST00000609104 SPIDRQ14159 915 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 PSMA8Q8TAA3 256 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 SYT15Q9BQS2 421 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 MBD5Q9P267 1494 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 RECQL5O94762 991 aaPredicted RBP13.25□□□□□ -0.29
USP6NL-205ENST00000609104 OVOS1Q6IE37 1185 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 EFCAB3Q8N7B9 438 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 TSPAN14Q8NG11 270 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 DLG3Q92796 817 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 TRMT13Q9NUP7 481 aaKnown RBP13.25□□□□□ -0.29
USP6NL-205ENST00000609104 MIPP30301 263 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 CAP2P40123 477 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 SLC25A3Q00325 362 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 BCL2L1Q07817 233 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 R3HCC1LQ7Z5L2 792 aaKnown RBP13.25□□□□□ -0.29
USP6NL-205ENST00000609104 STX12Q86Y82 276 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 SMARCD1Q96GM5 515 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 ATP4AP20648 1035 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 NPNTQ6UXI9 565 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 GCNT7Q6ZNI0 430 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 CHPFQ8IZ52 775 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 PRKD2Q9BZL6 878 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 ATP13A1Q9HD20 1204 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 PCDH12Q9NPG4 1184 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 ETAA1Q9NY74 926 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 USP20Q9Y2K6 914 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 CLTCQ00610 1675 aaKnown RBP13.25□□□□□ -0.29
USP6NL-205ENST00000609104 SASH3O75995 380 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 SEC24AO95486 1093 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 DBTP11182 482 aaKnown RBP13.25□□□□□ -0.29
USP6NL-205ENST00000609104 KLRK1P26718 216 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 ZNF268Q14587 947 aaPredicted RBP13.25□□□□□ -0.29
USP6NL-205ENST00000609104 CBWD6Q4V339 395 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 DEFB128Q7Z7B8 93 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 SETD4Q9NVD3 440 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 ETNK2Q9NVF9 386 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 PACSIN3Q9UKS6 424 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 CDKAL1Q5VV42 579 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 OLFML2AQ68BL7 652 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 SMYD1Q8NB12 490 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 ZNF540Q8NDQ6 660 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 PANX3Q96QZ0 392 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 SLC4A5Q9BY07 1137 aa13.25□□□□□ -0.29
USP6NL-205ENST00000609104 ELL3Q9HB65 397 aaPredicted RBP13.25□□□□□ -0.29
USP6NL-205ENST00000609104 TSPAN8P19075 237 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 ABCG1P45844 678 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 ABRAXAS1Q6UWZ7 409 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 CACUL1Q86Y37 369 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 SELENOMQ8WWX9 145 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 KAT5Q92993 513 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 VPS35Q96QK1 796 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 GMPPBQ9Y5P6 360 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 HACD1B0YJ81 288 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 PGM3O95394 542 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 HUNKP57058 714 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 ERVK-9P63128 1117 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 TNK2Q07912 1038 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 LGI2Q8N0V4 545 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 SIX5Q8N196 739 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 EHD4Q9H223 541 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 RPN2P04844 631 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 SLC12A3P55017 1021 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 PDK3Q15120 406 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 TRAPPC5Q8IUR0 188 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 STARD8Q92502 1023 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 SPG21Q9NZD8 308 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 TMEM216Q9P0N5 145 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 LCA5LO95447 670 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 CYP1A1P04798 512 aaPredicted RBP13.24□□□□□ -0.29
USP6NL-205ENST00000609104 CCDC166P0CW27 439 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 PSMB4P28070 264 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 CAMK1DQ8IU85 385 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 SLC25A23Q9BV35 468 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 ZFP14Q9HCL3 533 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 UNC13BO14795 1591 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 ACSL4O60488 711 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 KLRC2P26717 231 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 RPL14P50914 215 aaKnown RBP13.24□□□□□ -0.29
USP6NL-205ENST00000609104 FNDC3BQ53EP0 1204 aaKnown RBP13.24□□□□□ -0.29
USP6NL-205ENST00000609104 MOXD1Q6UVY6 613 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 GPR107Q5VW38 600 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 HIPK1Q86Z02 1210 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 ZNF280DQ6N043 979 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 PTGFRNQ9P2B2 879 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 CRNNQ9UBG3 495 aaPredicted RBP13.24□□□□□ -0.29
USP6NL-205ENST00000609104 BROXQ5VW32 411 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 RBM44Q6ZP01 1051 aaKnown RBP13.24□□□□□ -0.29
USP6NL-205ENST00000609104 FUKQ8N0W3 1084 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 RNPEPL1Q9HAU8 725 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 CDH9Q9ULB4 789 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 TULP4Q9NRJ4 1543 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 LACTBL1A8MY62 500 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 TP73O15350 636 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 ALADP13716 330 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 MAGEC3Q8TD91 643 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 BTBD9Q96Q07 612 aa13.24□□□□□ -0.29
USP6NL-205ENST00000609104 ZCCHC2Q9C0B9 1178 aaKnown RBP13.24□□□□□ -0.29
USP6NL-205ENST00000609104 C15orf38-AP3S2A0A0A6YYH1 394 aa13.23□□□□□ -0.29
USP6NL-205ENST00000609104 ERCC2P18074 760 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms