RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 ENGP17813 658 aa24.28■■□□□ 1.48
SSX2IP-209ENST00000603677 PSMA2P25787 234 aa24.28■■□□□ 1.48
SSX2IP-209ENST00000603677 ATXN3P54252 364 aaPredicted RBP24.28■■□□□ 1.48
SSX2IP-209ENST00000603677 SEMA3BQ13214 749 aa24.28■■□□□ 1.48
SSX2IP-209ENST00000603677 IL27RAQ6UWB1 636 aa24.28■■□□□ 1.48
SSX2IP-209ENST00000603677 PCDH20Q8N6Y1 951 aaKnown RBP24.28■■□□□ 1.48
SSX2IP-209ENST00000603677 RTL3Q8N8U3 475 aaKnown RBP24.28■■□□□ 1.48
SSX2IP-209ENST00000603677 GANCQ8TET4 914 aa24.28■■□□□ 1.48
SSX2IP-209ENST00000603677 CASKIN2Q8WXE0 1202 aa24.28■■□□□ 1.48
SSX2IP-209ENST00000603677 ZNF653Q96CK0 615 aa24.28■■□□□ 1.48
SSX2IP-209ENST00000603677 NEU3Q9UQ49 428 aa24.28■■□□□ 1.48
SSX2IP-209ENST00000603677 C10orf142B7Z368 130 aa24.27■■□□□ 1.48
SSX2IP-209ENST00000603677 FAM72CH0Y354 149 aa24.27■■□□□ 1.48
SSX2IP-209ENST00000603677 BCAT2O15382 392 aaPredicted RBP24.27■■□□□ 1.48
SSX2IP-209ENST00000603677 RAMP2O60895 175 aa24.27■■□□□ 1.48
SSX2IP-209ENST00000603677 PRNPP04156 253 aa24.27■■□□□ 1.48
SSX2IP-209ENST00000603677 EPHB2P29323 1055 aa24.27■■□□□ 1.48
SSX2IP-209ENST00000603677 PCK1P35558 622 aa24.27■■□□□ 1.48
SSX2IP-209ENST00000603677 RECQLP46063 649 aaPredicted RBP24.27■■□□□ 1.48
SSX2IP-209ENST00000603677 SERPINH1P50454 418 aaKnown RBP24.27■■□□□ 1.48
SSX2IP-209ENST00000603677 CCR5P51681 352 aa24.27■■□□□ 1.48
SSX2IP-209ENST00000603677 SLC14A1Q13336 389 aa24.27■■□□□ 1.48
SSX2IP-209ENST00000603677 NFKBIBQ15653 356 aa24.27■■□□□ 1.48
SSX2IP-209ENST00000603677 RAB6CQ53S08 254 aa24.27■■□□□ 1.48
SSX2IP-209ENST00000603677 ERMARDQ5T6L9 678 aa24.27■■□□□ 1.48
SSX2IP-209ENST00000603677 FAM72AQ5TYM5 149 aa24.27■■□□□ 1.48
SSX2IP-209ENST00000603677 FAM72DQ6L9T8 149 aa24.27■■□□□ 1.48
SSX2IP-209ENST00000603677 FAM124AQ86V42 546 aa24.27■■□□□ 1.48
SSX2IP-209ENST00000603677 FAM72BQ86X60 149 aa24.27■■□□□ 1.48
SSX2IP-209ENST00000603677 CACUL1Q86Y37 369 aa24.27■■□□□ 1.48
SSX2IP-209ENST00000603677 DEFB119Q8N690 84 aa24.27■■□□□ 1.48
SSX2IP-209ENST00000603677 C1orf216Q8TAB5 229 aa24.27■■□□□ 1.48
SSX2IP-209ENST00000603677 CPLX3Q8WVH0 158 aa24.27■■□□□ 1.48
SSX2IP-209ENST00000603677 ARHGEF2Q92974 986 aaKnown RBP24.27■■□□□ 1.48
SSX2IP-209ENST00000603677 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.27■■□□□ 1.48
SSX2IP-209ENST00000603677 RAB6CQ9H0N0 254 aa24.27■■□□□ 1.48
SSX2IP-209ENST00000603677 NEUROG2Q9H2A3 272 aa24.27■■□□□ 1.48
SSX2IP-209ENST00000603677 LCMT1Q9UIC8 334 aa24.27■■□□□ 1.48
SSX2IP-209ENST00000603677 C4orf47A7E2U8 309 aa24.26■■□□□ 1.47
SSX2IP-209ENST00000603677 CBX4O00257 560 aa24.26■■□□□ 1.47
SSX2IP-209ENST00000603677 RNASEH2AO75792 299 aaKnown RBP24.26■■□□□ 1.47
SSX2IP-209ENST00000603677 CD27P26842 260 aa24.26■■□□□ 1.47
SSX2IP-209ENST00000603677 CASP14P31944 242 aa24.26■■□□□ 1.47
SSX2IP-209ENST00000603677 AFF3P51826 1226 aaKnown RBP24.26■■□□□ 1.47
SSX2IP-209ENST00000603677 GALCP54803 685 aa24.26■■□□□ 1.47
SSX2IP-209ENST00000603677 OGDHQ02218 1023 aa24.26■■□□□ 1.47
SSX2IP-209ENST00000603677 PIGHQ14442 188 aaPredicted RBP24.26■■□□□ 1.47
SSX2IP-209ENST00000603677 TSR1Q2NL82 804 aaKnown RBP24.26■■□□□ 1.47
SSX2IP-209ENST00000603677 KIAA0895LQ68EN5 471 aa24.26■■□□□ 1.47
SSX2IP-209ENST00000603677 HDDC3Q8N4P3 179 aa24.26■■□□□ 1.47
SSX2IP-209ENST00000603677 OR8K1Q8NGG5 319 aa24.26■■□□□ 1.47
SSX2IP-209ENST00000603677 LRIG1Q96JA1 1093 aa24.26■■□□□ 1.47
SSX2IP-209ENST00000603677 SPON2Q9BUD6 331 aa24.26■■□□□ 1.47
SSX2IP-209ENST00000603677 C6orf106Q9H6K1 298 aaPredicted RBP24.26■■□□□ 1.47
SSX2IP-209ENST00000603677 NUMA1Q14980 2115 aa24.25■■□□□ 1.47
SSX2IP-209ENST00000603677 A0A1W2PP55 124 aa24.25■■□□□ 1.47
SSX2IP-209ENST00000603677 PRPSAP2O60256 369 aa24.25■■□□□ 1.47
SSX2IP-209ENST00000603677 SNAP91O60641 907 aa24.25■■□□□ 1.47
SSX2IP-209ENST00000603677 MT-CO1P00395 513 aa24.25■■□□□ 1.47
SSX2IP-209ENST00000603677 PSMD8P48556 350 aa24.25■■□□□ 1.47
SSX2IP-209ENST00000603677 HCAR3P49019 387 aa24.25■■□□□ 1.47
SSX2IP-209ENST00000603677 POLD3Q15054 466 aaPredicted RBP24.25■■□□□ 1.47
SSX2IP-209ENST00000603677 PARP15Q460N3 678 aa24.25■■□□□ 1.47
SSX2IP-209ENST00000603677 ALKBH5Q6P6C2 394 aaKnown RBP24.25■■□□□ 1.47
SSX2IP-209ENST00000603677 Q6ZVU0 165 aa24.25■■□□□ 1.47
SSX2IP-209ENST00000603677 UMODL1-AS1Q8N2C9 162 aa24.25■■□□□ 1.47
SSX2IP-209ENST00000603677 OR7D4Q8NG98 312 aa24.25■■□□□ 1.47
SSX2IP-209ENST00000603677 OR2A12Q8NGT7 310 aa24.25■■□□□ 1.47
SSX2IP-209ENST00000603677 PIP4K2CQ8TBX8 421 aa24.25■■□□□ 1.47
SSX2IP-209ENST00000603677 BIRC7Q96CA5 298 aa24.25■■□□□ 1.47
SSX2IP-209ENST00000603677 DNAJC7Q99615 494 aa24.25■■□□□ 1.47
SSX2IP-209ENST00000603677 DNAAF2Q9NVR5 837 aaKnown RBP24.25■■□□□ 1.47
SSX2IP-209ENST00000603677 ZNHIT6Q9NWK9 470 aaKnown RBP24.25■■□□□ 1.47
SSX2IP-209ENST00000603677 ATXN2Q99700 1313 aaKnown RBP24.25■■□□□ 1.47
SSX2IP-209ENST00000603677 PCDH15Q96QU1 1955 aa24.24■■□□□ 1.47
SSX2IP-209ENST00000603677 SSU72P8A0A1W2PR75 194 aa24.24■■□□□ 1.47
SSX2IP-209ENST00000603677 CSRP1P21291 193 aaKnown RBP24.24■■□□□ 1.47
SSX2IP-209ENST00000603677 CHRNA3P32297 505 aa24.24■■□□□ 1.47
SSX2IP-209ENST00000603677 GRIA4P48058 902 aa24.24■■□□□ 1.47
SSX2IP-209ENST00000603677 TEAD4Q15561 434 aa24.24■■□□□ 1.47
SSX2IP-209ENST00000603677 BOLA3Q53S33 107 aa24.24■■□□□ 1.47
SSX2IP-209ENST00000603677 INO80DQ53TQ3 878 aaPredicted RBP24.24■■□□□ 1.47
SSX2IP-209ENST00000603677 NEK5Q6P3R8 708 aa24.24■■□□□ 1.47
SSX2IP-209ENST00000603677 C22orf39Q6P5X5 142 aa24.24■■□□□ 1.47
SSX2IP-209ENST00000603677 AADATQ8N5Z0 425 aa24.24■■□□□ 1.47
SSX2IP-209ENST00000603677 NIPA2Q8N8Q9 360 aa24.24■■□□□ 1.47
SSX2IP-209ENST00000603677 SKA1Q96BD8 255 aa24.24■■□□□ 1.47
SSX2IP-209ENST00000603677 PPP1R16AQ96I34 528 aa24.24■■□□□ 1.47
SSX2IP-209ENST00000603677 EIF2B4Q9UI10 523 aaKnown RBP24.24■■□□□ 1.47
SSX2IP-209ENST00000603677 CNOT1A5YKK6 2376 aaKnown RBP24.24■■□□□ 1.47
SSX2IP-209ENST00000603677 A0A1W2PPC4 97 aa24.23■■□□□ 1.47
SSX2IP-209ENST00000603677 KDELR3O43731 214 aa24.23■■□□□ 1.47
SSX2IP-209ENST00000603677 VAV1P15498 845 aa24.23■■□□□ 1.47
SSX2IP-209ENST00000603677 DRD3P35462 400 aa24.23■■□□□ 1.47
SSX2IP-209ENST00000603677 NDST2P52849 883 aa24.23■■□□□ 1.47
SSX2IP-209ENST00000603677 ARF5P84085 180 aa24.23■■□□□ 1.47
SSX2IP-209ENST00000603677 HNRNPDQ14103 355 aaKnown RBP24.23■■□□□ 1.47
SSX2IP-209ENST00000603677 ZSCAN30Q86W11 494 aa24.23■■□□□ 1.47
SSX2IP-209ENST00000603677 VSTM4Q8IW00 320 aa24.23■■□□□ 1.47
SSX2IP-209ENST00000603677 ARHGAP20Q9P2F6 1191 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms