RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 SPATA13Q96N96 652 aa17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 GORASP1Q9BQQ3 440 aa17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 PLK2Q9NYY3 685 aa17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 CLEC4EQ9ULY5 219 aa17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 ZNF197O14709 1029 aa17.71■□□□□ 0.43
PPFIA3-207ENST00000602716 RAMP2O60895 175 aa17.71■□□□□ 0.43
PPFIA3-207ENST00000602716 GCATO75600 419 aa17.71■□□□□ 0.43
PPFIA3-207ENST00000602716 MAPKAPK2P49137 400 aa17.71■□□□□ 0.43
PPFIA3-207ENST00000602716 SLMAPQ14BN4 828 aa17.71■□□□□ 0.43
PPFIA3-207ENST00000602716 FSCBQ5H9T9 825 aa17.71■□□□□ 0.43
PPFIA3-207ENST00000602716 C6orf118Q5T5N4 469 aa17.71■□□□□ 0.43
PPFIA3-207ENST00000602716 TPGS1Q6ZTW0 290 aa17.71■□□□□ 0.43
PPFIA3-207ENST00000602716 PRCCQ92733 491 aaPredicted RBP17.71■□□□□ 0.43
PPFIA3-207ENST00000602716 FAM161BQ96MY7 647 aa17.71■□□□□ 0.43
PPFIA3-207ENST00000602716 RAB6BQ9NRW1 208 aa17.71■□□□□ 0.43
PPFIA3-207ENST00000602716 ANAPC5Q9UJX4 755 aa17.71■□□□□ 0.43
PPFIA3-207ENST00000602716 ACTL7AQ9Y615 435 aa17.71■□□□□ 0.43
PPFIA3-207ENST00000602716 MTCH2Q9Y6C9 303 aa17.71■□□□□ 0.43
PPFIA3-207ENST00000602716 SPTBN5Q9NRC6 3674 aaKnown RBP17.71■□□□□ 0.43
PPFIA3-207ENST00000602716 A0A1B0GVM2 712 aa17.71■□□□□ 0.42
PPFIA3-207ENST00000602716 TCAF2A6NFQ2 919 aa17.71■□□□□ 0.42
PPFIA3-207ENST00000602716 GOLGA8MH3BSY2 632 aa17.71■□□□□ 0.42
PPFIA3-207ENST00000602716 NCAM2O15394 837 aa17.71■□□□□ 0.42
PPFIA3-207ENST00000602716 RGS16O15492 202 aaPredicted RBP17.71■□□□□ 0.42
PPFIA3-207ENST00000602716 RIPK2O43353 540 aa17.71■□□□□ 0.42
PPFIA3-207ENST00000602716 PEX11BO96011 259 aa17.71■□□□□ 0.42
PPFIA3-207ENST00000602716 AGTP01019 485 aa17.71■□□□□ 0.42
PPFIA3-207ENST00000602716 VIPR2P41587 438 aa17.71■□□□□ 0.42
PPFIA3-207ENST00000602716 CDH4P55283 916 aa17.71■□□□□ 0.42
PPFIA3-207ENST00000602716 ADAM15Q13444 863 aa17.71■□□□□ 0.42
PPFIA3-207ENST00000602716 ACBD5Q5T8D3 534 aaPredicted RBP17.71■□□□□ 0.42
PPFIA3-207ENST00000602716 CCDC121Q6ZUS5 278 aa17.71■□□□□ 0.42
PPFIA3-207ENST00000602716 CACNA2D3Q8IZS8 1091 aa17.71■□□□□ 0.42
PPFIA3-207ENST00000602716 TDRD5Q8NAT2 981 aaKnown RBP17.71■□□□□ 0.42
PPFIA3-207ENST00000602716 CCHCR1Q8TD31 782 aa17.71■□□□□ 0.42
PPFIA3-207ENST00000602716 CHMP6Q96FZ7 201 aa17.71■□□□□ 0.42
PPFIA3-207ENST00000602716 ETNK1Q9HBU6 452 aa17.71■□□□□ 0.42
PPFIA3-207ENST00000602716 PAK5Q9P286 719 aa17.71■□□□□ 0.42
PPFIA3-207ENST00000602716 IPO11Q9UI26 975 aaKnown RBP17.71■□□□□ 0.42
PPFIA3-207ENST00000602716 TPX2Q9ULW0 747 aaKnown RBP17.71■□□□□ 0.42
PPFIA3-207ENST00000602716 NUP205Q92621 2012 aa17.7■□□□□ 0.42
PPFIA3-207ENST00000602716 TLDC2A0PJX2 215 aa17.7■□□□□ 0.42
PPFIA3-207ENST00000602716 H0YHG0 523 aa17.7■□□□□ 0.42
PPFIA3-207ENST00000602716 BANF1O75531 89 aa17.7■□□□□ 0.42
PPFIA3-207ENST00000602716 CHN1P15882 459 aa17.7■□□□□ 0.42
PPFIA3-207ENST00000602716 ITIH2P19823 946 aa17.7■□□□□ 0.42
PPFIA3-207ENST00000602716 GLDCP23378 1020 aa17.7■□□□□ 0.42
PPFIA3-207ENST00000602716 FSHRP23945 695 aa17.7■□□□□ 0.42
PPFIA3-207ENST00000602716 PSMB4P28070 264 aa17.7■□□□□ 0.42
PPFIA3-207ENST00000602716 HOXD9P28356 352 aaPredicted RBP17.7■□□□□ 0.42
PPFIA3-207ENST00000602716 CD68P34810 354 aaPredicted RBP17.7■□□□□ 0.42
PPFIA3-207ENST00000602716 NDST2P52849 883 aa17.7■□□□□ 0.42
PPFIA3-207ENST00000602716 KCNJ11Q14654 390 aa17.7■□□□□ 0.42
PPFIA3-207ENST00000602716 CNTD1Q8N815 330 aa17.7■□□□□ 0.42
PPFIA3-207ENST00000602716 NAT8LQ8N9F0 302 aa17.7■□□□□ 0.42
PPFIA3-207ENST00000602716 ATXN2LQ8WWM7 1075 aaKnown RBP17.7■□□□□ 0.42
PPFIA3-207ENST00000602716 FGF13Q92913 245 aa17.7■□□□□ 0.42
PPFIA3-207ENST00000602716 LRCH3Q96II8 777 aa17.7■□□□□ 0.42
PPFIA3-207ENST00000602716 AGAP3Q96P47 875 aa17.7■□□□□ 0.42
PPFIA3-207ENST00000602716 WNT6Q9Y6F9 365 aa17.7■□□□□ 0.42
PPFIA3-207ENST00000602716 ZBTB24O43167 697 aaPredicted RBP17.69■□□□□ 0.42
PPFIA3-207ENST00000602716 JCHAINP01591 159 aa17.69■□□□□ 0.42
PPFIA3-207ENST00000602716 IFI35P80217 286 aaPredicted RBP17.69■□□□□ 0.42
PPFIA3-207ENST00000602716 POLD3Q15054 466 aaPredicted RBP17.69■□□□□ 0.42
PPFIA3-207ENST00000602716 TNFAIP8L3Q5GJ75 292 aa17.69■□□□□ 0.42
PPFIA3-207ENST00000602716 FAM78AQ5JUQ0 283 aa17.69■□□□□ 0.42
PPFIA3-207ENST00000602716 GKAP1Q5VSY0 366 aaPredicted RBP17.69■□□□□ 0.42
PPFIA3-207ENST00000602716 ARHGEF18Q6ZSZ5 1173 aa17.69■□□□□ 0.42
PPFIA3-207ENST00000602716 CHST9Q7L1S5 443 aa17.69■□□□□ 0.42
PPFIA3-207ENST00000602716 CARNMT1Q8N4J0 409 aa17.69■□□□□ 0.42
PPFIA3-207ENST00000602716 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.69■□□□□ 0.42
PPFIA3-207ENST00000602716 HJURPQ8NCD3 748 aaPredicted RBP17.69■□□□□ 0.42
PPFIA3-207ENST00000602716 CABS1Q96KC9 395 aa17.69■□□□□ 0.42
PPFIA3-207ENST00000602716 TSGA13Q96PP4 275 aa17.69■□□□□ 0.42
PPFIA3-207ENST00000602716 ZNF317Q96PQ6 595 aaPredicted RBP17.69■□□□□ 0.42
PPFIA3-207ENST00000602716 LINC00597Q9H2U6 94 aa17.69■□□□□ 0.42
PPFIA3-207ENST00000602716 ACTR5Q9H9F9 607 aaPredicted RBP17.69■□□□□ 0.42
PPFIA3-207ENST00000602716 KLHL8Q9P2G9 620 aaPredicted RBP17.69■□□□□ 0.42
PPFIA3-207ENST00000602716 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.69■□□□□ 0.42
PPFIA3-207ENST00000602716 E2F8A0AVK6 867 aa17.69■□□□□ 0.42
PPFIA3-207ENST00000602716 CLDN11O75508 207 aa17.69■□□□□ 0.42
PPFIA3-207ENST00000602716 GNA12Q03113 381 aa17.69■□□□□ 0.42
PPFIA3-207ENST00000602716 SERINC3Q13530 473 aa17.69■□□□□ 0.42
PPFIA3-207ENST00000602716 EP400NLQ6ZTU2 488 aa17.69■□□□□ 0.42
PPFIA3-207ENST00000602716 CPLX4Q7Z7G2 160 aa17.69■□□□□ 0.42
PPFIA3-207ENST00000602716 CCDC25Q86WR0 208 aa17.69■□□□□ 0.42
PPFIA3-207ENST00000602716 ZNF354CQ86Y25 554 aa17.69■□□□□ 0.42
PPFIA3-207ENST00000602716 CPXM2Q8N436 756 aa17.69■□□□□ 0.42
PPFIA3-207ENST00000602716 ARHGEF2Q92974 986 aaKnown RBP17.69■□□□□ 0.42
PPFIA3-207ENST00000602716 TMA16Q96EY4 203 aaKnown RBP17.69■□□□□ 0.42
PPFIA3-207ENST00000602716 CLDND1Q9NY35 253 aa17.69■□□□□ 0.42
PPFIA3-207ENST00000602716 SMIM23A6NLE4 172 aa17.68■□□□□ 0.42
PPFIA3-207ENST00000602716 RHOCP08134 193 aa17.68■□□□□ 0.42
PPFIA3-207ENST00000602716 CCNCP24863 283 aa17.68■□□□□ 0.42
PPFIA3-207ENST00000602716 MZF1P28698 734 aaPredicted RBP17.68■□□□□ 0.42
PPFIA3-207ENST00000602716 LTBRP36941 435 aa17.68■□□□□ 0.42
PPFIA3-207ENST00000602716 OLIG2Q13516 323 aa17.68■□□□□ 0.42
PPFIA3-207ENST00000602716 EPS8L3Q8TE67 593 aaKnown RBP17.68■□□□□ 0.42
PPFIA3-207ENST00000602716 ASIC4Q96FT7 647 aa17.68■□□□□ 0.42
PPFIA3-207ENST00000602716 DDX50Q9BQ39 737 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms