RNA–Protein interactions for RNA: ENST00000602251.5

LTBP4-231, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 2

Gene LTBP4, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-231	ENST00000602251	CDH18	Q13634	790 aa		18.98	■□□□□ 0.63
LTBP4-231	ENST00000602251	ELAVL3	Q14576	367 aa	Known RBP	18.98	■□□□□ 0.63
LTBP4-231	ENST00000602251	ISX	Q2M1V0	245 aa		18.98	■□□□□ 0.63
LTBP4-231	ENST00000602251	COLEC12	Q5KU26	742 aa		18.98	■□□□□ 0.63
LTBP4-231	ENST00000602251	CCDC81	Q6ZN84	652 aa		18.98	■□□□□ 0.63
LTBP4-231	ENST00000602251	TRIM69	Q86WT6	500 aa		18.98	■□□□□ 0.63
LTBP4-231	ENST00000602251	EXD3	Q8N9H8	876 aa		18.98	■□□□□ 0.63
LTBP4-231	ENST00000602251	TFAP2B	Q92481	460 aa		18.98	■□□□□ 0.63
LTBP4-231	ENST00000602251	APOLD1	Q96LR9	279 aa		18.98	■□□□□ 0.63
LTBP4-231	ENST00000602251	FAM117A	Q9C073	453 aa		18.98	■□□□□ 0.63
LTBP4-231	ENST00000602251	CAAP1	Q9H8G2	361 aa		18.98	■□□□□ 0.63
LTBP4-231	ENST00000602251	CNTN6	Q9UQ52	1028 aa		18.98	■□□□□ 0.63
LTBP4-231	ENST00000602251	CEP83	Q9Y592	693 aa		18.98	■□□□□ 0.63
LTBP4-231	ENST00000602251	AHCTF1	Q8WYP5	2266 aa		18.98	■□□□□ 0.63
LTBP4-231	ENST00000602251	DOPEY2	Q9Y3R5	2298 aa		18.97	■□□□□ 0.63
LTBP4-231	ENST00000602251	LY6G6E	A0A0G2JKS1	128 aa		18.97	■□□□□ 0.63
LTBP4-231	ENST00000602251	SLC7A4	O43246	635 aa		18.97	■□□□□ 0.63
LTBP4-231	ENST00000602251	THAP12	O43422	761 aa		18.97	■□□□□ 0.63
LTBP4-231	ENST00000602251	LZTS3	O60299	673 aa	Predicted RBP	18.97	■□□□□ 0.63
LTBP4-231	ENST00000602251	VAV1	P15498	845 aa		18.97	■□□□□ 0.63
LTBP4-231	ENST00000602251	RBMS1	P29558	406 aa	Known RBP	18.97	■□□□□ 0.63
LTBP4-231	ENST00000602251	RAPGEF1	Q13905	1077 aa		18.97	■□□□□ 0.63
LTBP4-231	ENST00000602251	POM121L1P	Q3SYA9	428 aa		18.97	■□□□□ 0.63
LTBP4-231	ENST00000602251	SETMAR	Q53H47	684 aa	Predicted RBP	18.97	■□□□□ 0.63
LTBP4-231	ENST00000602251	C3orf38	Q5JPI3	329 aa		18.97	■□□□□ 0.63
LTBP4-231	ENST00000602251	RNF219	Q5W0B1	726 aa	Predicted RBP	18.97	■□□□□ 0.63
LTBP4-231	ENST00000602251	CCDC117	Q8IWD4	279 aa	Predicted RBP	18.97	■□□□□ 0.63
LTBP4-231	ENST00000602251	APCDD1	Q8J025	514 aa		18.97	■□□□□ 0.63
LTBP4-231	ENST00000602251	SIX6OS1	Q8N1H7	587 aa		18.97	■□□□□ 0.63
LTBP4-231	ENST00000602251	CFAP52	Q8N1V2	620 aa		18.97	■□□□□ 0.63
LTBP4-231	ENST00000602251	CCDC97	Q96F63	343 aa	Predicted RBP	18.97	■□□□□ 0.63
LTBP4-231	ENST00000602251	SARDH	Q9UL12	918 aa		18.97	■□□□□ 0.63
LTBP4-231	ENST00000602251	HEMK1	Q9Y5R4	338 aa	Predicted RBP	18.97	■□□□□ 0.63
LTBP4-231	ENST00000602251		U3KQA8	63 aa		18.97	■□□□□ 0.63
LTBP4-231	ENST00000602251	BSN	Q9UPA5	3926 aa		18.96	■□□□□ 0.63
LTBP4-231	ENST00000602251	USP9X	Q93008	2570 aa	Predicted RBP	18.96	■□□□□ 0.63
LTBP4-231	ENST00000602251	SYCE3	A1L190	88 aa		18.96	■□□□□ 0.63
LTBP4-231	ENST00000602251	TYW5	A2RUC4	315 aa	Known RBP	18.96	■□□□□ 0.63
LTBP4-231	ENST00000602251	BECN2	A8MW95	431 aa		18.96	■□□□□ 0.63
LTBP4-231	ENST00000602251	PIAS2	O75928	621 aa		18.96	■□□□□ 0.63
LTBP4-231	ENST00000602251	MOCS3	O95396	460 aa		18.96	■□□□□ 0.63
LTBP4-231	ENST00000602251	CALCA	P01258	141 aa		18.96	■□□□□ 0.63
LTBP4-231	ENST00000602251	THEGL	P0DJG4	465 aa		18.96	■□□□□ 0.63
LTBP4-231	ENST00000602251	GNA15	P30679	374 aa		18.96	■□□□□ 0.63
LTBP4-231	ENST00000602251	STK19	P49842	368 aa	Predicted RBP	18.96	■□□□□ 0.63
LTBP4-231	ENST00000602251	TBX4	P57082	545 aa		18.96	■□□□□ 0.63
LTBP4-231	ENST00000602251	DAOA	P59103	153 aa		18.96	■□□□□ 0.63
LTBP4-231	ENST00000602251	ARL13B	Q3SXY8	428 aa		18.96	■□□□□ 0.63
LTBP4-231	ENST00000602251	SCML4	Q8N228	414 aa		18.96	■□□□□ 0.63
LTBP4-231	ENST00000602251	TMEM145	Q8NBT3	493 aa		18.96	■□□□□ 0.63
LTBP4-231	ENST00000602251	KCTD13	Q8WZ19	329 aa		18.96	■□□□□ 0.63
LTBP4-231	ENST00000602251	PRR11	Q96HE9	360 aa	Predicted RBP	18.96	■□□□□ 0.63
LTBP4-231	ENST00000602251	PCMTD1	Q96MG8	357 aa	Predicted RBP	18.96	■□□□□ 0.63
LTBP4-231	ENST00000602251	SPAG5	Q96R06	1193 aa		18.96	■□□□□ 0.63
LTBP4-231	ENST00000602251	DDX50	Q9BQ39	737 aa	Known RBP	18.96	■□□□□ 0.63
LTBP4-231	ENST00000602251	BPIFA3	Q9BQP9	254 aa		18.96	■□□□□ 0.63
LTBP4-231	ENST00000602251	SIX2	Q9NPC8	291 aa		18.96	■□□□□ 0.63
LTBP4-231	ENST00000602251	CNGB3	Q9NQW8	809 aa		18.96	■□□□□ 0.63
LTBP4-231	ENST00000602251	NLGN3	Q9NZ94	848 aa		18.96	■□□□□ 0.63
LTBP4-231	ENST00000602251	TDRD6	O60522	2096 aa	Known RBP	18.96	■□□□□ 0.63
LTBP4-231	ENST00000602251	TERT	O14746	1132 aa	Known RBP	18.95	■□□□□ 0.62
LTBP4-231	ENST00000602251	RNGTT	O60942	597 aa	Known RBP	18.95	■□□□□ 0.62
LTBP4-231	ENST00000602251	LUC7L3	O95232	432 aa	Known RBP	18.95	■□□□□ 0.62
LTBP4-231	ENST00000602251	ALPPL2	P10696	532 aa		18.95	■□□□□ 0.62
LTBP4-231	ENST00000602251	ZNF165	P49910	485 aa		18.95	■□□□□ 0.62
LTBP4-231	ENST00000602251	DUSP3	P51452	185 aa	Predicted RBP	18.95	■□□□□ 0.62
LTBP4-231	ENST00000602251	COPB1	P53618	953 aa	Known RBP	18.95	■□□□□ 0.62
LTBP4-231	ENST00000602251	PTK2	Q05397	1052 aa		18.95	■□□□□ 0.62
LTBP4-231	ENST00000602251	CNTN1	Q12860	1018 aa		18.95	■□□□□ 0.62
LTBP4-231	ENST00000602251	DCAF6	Q58WW2	860 aa		18.95	■□□□□ 0.62
LTBP4-231	ENST00000602251	MS4A13	Q5J8X5	152 aa		18.95	■□□□□ 0.62
LTBP4-231	ENST00000602251	MAPK15	Q8TD08	544 aa		18.95	■□□□□ 0.62
LTBP4-231	ENST00000602251	SHC3	Q92529	594 aa		18.95	■□□□□ 0.62
LTBP4-231	ENST00000602251	ATXN7L3B	Q96GX2	97 aa		18.95	■□□□□ 0.62
LTBP4-231	ENST00000602251	NUCKS1	Q9H1E3	243 aa	Known RBP	18.95	■□□□□ 0.62
LTBP4-231	ENST00000602251	USP29	Q9HBJ7	922 aa		18.95	■□□□□ 0.62
LTBP4-231	ENST00000602251	TJP2	Q9UDY2	1190 aa		18.95	■□□□□ 0.62
LTBP4-231	ENST00000602251	LIMA1	Q9UHB6	759 aa	Known RBP	18.95	■□□□□ 0.62
LTBP4-231	ENST00000602251	CDRT15L2	A8MXV6	281 aa		18.94	■□□□□ 0.62
LTBP4-231	ENST00000602251	GABBR2	O75899	941 aa		18.94	■□□□□ 0.62
LTBP4-231	ENST00000602251	LCP1	P13796	627 aa		18.94	■□□□□ 0.62
LTBP4-231	ENST00000602251	TGM2	P21980	687 aa		18.94	■□□□□ 0.62
LTBP4-231	ENST00000602251	NNMT	P40261	264 aa		18.94	■□□□□ 0.62
LTBP4-231	ENST00000602251	RGS7	P49802	495 aa		18.94	■□□□□ 0.62
LTBP4-231	ENST00000602251	BPIFB4	P59827	614 aa		18.94	■□□□□ 0.62
LTBP4-231	ENST00000602251	CLN3	Q13286	438 aa		18.94	■□□□□ 0.62
LTBP4-231	ENST00000602251	KLHDC7A	Q5VTJ3	777 aa		18.94	■□□□□ 0.62
LTBP4-231	ENST00000602251	AGBL4	Q5VU57	503 aa		18.94	■□□□□ 0.62
LTBP4-231	ENST00000602251	SMYD5	Q6GMV2	418 aa		18.94	■□□□□ 0.62
LTBP4-231	ENST00000602251	IFI44	Q8TCB0	444 aa		18.94	■□□□□ 0.62
LTBP4-231	ENST00000602251	FRS2	Q8WU20	508 aa		18.94	■□□□□ 0.62
LTBP4-231	ENST00000602251	ZNF606	Q8WXB4	792 aa		18.94	■□□□□ 0.62
LTBP4-231	ENST00000602251	GRAMD1A	Q96CP6	724 aa		18.94	■□□□□ 0.62
LTBP4-231	ENST00000602251	ZSWIM1	Q9BR11	485 aa		18.94	■□□□□ 0.62
LTBP4-231	ENST00000602251	ST7	Q9NRC1	585 aa		18.94	■□□□□ 0.62
LTBP4-231	ENST00000602251	PCDHGA8	Q9Y5G5	932 aa		18.94	■□□□□ 0.62
LTBP4-231	ENST00000602251	NYNRIN	Q9P2P1	1898 aa	Known RBP	18.93	■□□□□ 0.62
LTBP4-231	ENST00000602251	NEMP2	A6NFY4	417 aa		18.93	■□□□□ 0.62
LTBP4-231	ENST00000602251		K7ESM1	405 aa		18.93	■□□□□ 0.62
LTBP4-231	ENST00000602251	FOXN3	O00409	490 aa	Predicted RBP	18.93	■□□□□ 0.62

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms