RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 GPATCH2LQ9NWQ4 482 aa10.32□□□□□ -0.76
UPF1-213ENST00000601981 HPCAL4Q9UM19 191 aa10.32□□□□□ -0.76
UPF1-213ENST00000601981 DRG1Q9Y295 367 aaKnown RBP10.32□□□□□ -0.76
UPF1-213ENST00000601981 SNX10Q9Y5X0 201 aa10.32□□□□□ -0.76
UPF1-213ENST00000601981 A0A0A0MRY4 1105 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 ILVBLA1L0T0 632 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 APOC4-APOC2K7ER74 178 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 CST8O60676 142 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 EGFP01133 1207 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 APOC2P02655 101 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 ITGAVP06756 1048 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 CD48P09326 243 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 CISD3P0C7P0 127 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 CHRNB1P11230 501 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 HLA-FP30511 346 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 SERPINB6P35237 376 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 HSPA9P38646 679 aaKnown RBP10.31□□□□□ -0.76
UPF1-213ENST00000601981 NNMTP40261 264 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 RPL21P46778 160 aaKnown RBP10.31□□□□□ -0.76
UPF1-213ENST00000601981 HCAR3P49019 387 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 ST8SIA6P61647 398 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 LMAN2Q12907 356 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 SEMA3BQ13214 749 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 GPS2Q13227 327 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 BYSLQ13895 437 aaKnown RBP10.31□□□□□ -0.76
UPF1-213ENST00000601981 TRADDQ15628 312 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 OASLQ15646 514 aaKnown RBP10.31□□□□□ -0.76
UPF1-213ENST00000601981 ALFQ53S48 1182 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 RNF219Q5W0B1 726 aaPredicted RBP10.31□□□□□ -0.76
UPF1-213ENST00000601981 CWF19L1Q69YN2 538 aaKnown RBP10.31□□□□□ -0.76
UPF1-213ENST00000601981 RFX8Q6ZV50 586 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 TFAP2DQ7Z6R9 452 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 RFX6Q8HWS3 928 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 ZNF683Q8IZ20 524 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 KRT222Q8N1A0 295 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 PYROXD2Q8N2H3 581 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 PHTF2Q8N3S3 785 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 ZNF513Q8N8E2 541 aaPredicted RBP10.31□□□□□ -0.76
UPF1-213ENST00000601981 RTL3Q8N8U3 475 aaKnown RBP10.31□□□□□ -0.76
UPF1-213ENST00000601981 SLC35B2Q8TB61 432 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 CCHCR1Q8TD31 782 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 CLDN23Q96B33 292 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 LRRC45Q96CN5 670 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 FAF2Q96CS3 445 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 CCDC114Q96M63 670 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 KCTD15Q96SI1 283 aaPredicted RBP10.31□□□□□ -0.76
UPF1-213ENST00000601981 C2orf49Q9BVC5 232 aaPredicted RBP10.31□□□□□ -0.76
UPF1-213ENST00000601981 CALN1Q9BXU9 219 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 MAK16Q9BXY0 300 aaKnown RBP10.31□□□□□ -0.76
UPF1-213ENST00000601981 TRIM31Q9BZY9 425 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 NEUROG2Q9H2A3 272 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 PRDM16Q9HAZ2 1276 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 ZDHHC18Q9NUE0 388 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 TMEM248Q9NWD8 314 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 GRHL1Q9NZI5 618 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 MPP6Q9NZW5 540 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 WHRNQ9P202 907 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 SLC25A13Q9UJS0 675 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 VPS28Q9UK41 221 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 PLA2G4CQ9UP65 541 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 SLC8A2Q9UPR5 921 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 TBC1D30Q9Y2I9 924 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 NEU2Q9Y3R4 380 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 SHROOM3Q8TF72 1996 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 KMT2EQ8IZD2 1858 aa10.31□□□□□ -0.76
UPF1-213ENST00000601981 NYNRINQ9P2P1 1898 aaKnown RBP10.3□□□□□ -0.76
UPF1-213ENST00000601981 FAM86C2PA6NEL3 165 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 WASH4PA8MWX3 477 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 FAM72CH0Y354 149 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 NDC80O14777 642 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 ZBTB24O43167 697 aaPredicted RBP10.3□□□□□ -0.76
UPF1-213ENST00000601981 RAMP2O60895 175 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 RNF40O75150 1001 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 CNTN5O94779 1100 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 PDGFBP01127 241 aaPredicted RBP10.3□□□□□ -0.76
UPF1-213ENST00000601981 FAM153BP0C7A2 387 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 GOT1P17174 413 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 TGM2P21980 687 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 CD70P32970 193 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 CSKP41240 450 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 PLK1P53350 603 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 SEC13P55735 322 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 GEMIN4P57678 1058 aaKnown RBP10.3□□□□□ -0.76
UPF1-213ENST00000601981 OTUD4Q01804 1114 aaKnown RBP10.3□□□□□ -0.76
UPF1-213ENST00000601981 CAV1Q03135 178 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 CA9Q16790 459 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 GEN1Q17RS7 908 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 PLEKHG6Q3KR16 790 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 FAM153CQ494X1 144 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 PITRM1Q5JRX3 1037 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 SPDYCQ5MJ68 293 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 EOGTQ5NDL2 527 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 FAM72AQ5TYM5 149 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 MBLAC2Q68D91 279 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 SLC9A4Q6AI14 798 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 FAM72DQ6L9T8 149 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 ZDHHC24Q6UX98 284 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 FAM72BQ86X60 149 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 ZNF354CQ86Y25 554 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 LZTR1Q8N653 840 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms