RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 R3HDM2Q9Y2K5 976 aaKnown RBP20.43■□□□□ 0.86
SHKBP1-222ENST00000600320 SIT1Q9Y3P8 196 aa20.43■□□□□ 0.86
SHKBP1-222ENST00000600320 SMAD6O43541 496 aaKnown RBP20.42■□□□□ 0.86
SHKBP1-222ENST00000600320 PEX11BO96011 259 aa20.42■□□□□ 0.86
SHKBP1-222ENST00000600320 FGGP02679 453 aa20.42■□□□□ 0.86
SHKBP1-222ENST00000600320 DCNP07585 359 aaKnown RBP20.42■□□□□ 0.86
SHKBP1-222ENST00000600320 SRPRAP08240 638 aaKnown RBP20.42■□□□□ 0.86
SHKBP1-222ENST00000600320 SRCP12931 536 aa20.42■□□□□ 0.86
SHKBP1-222ENST00000600320 PRKCHP24723 683 aa20.42■□□□□ 0.86
SHKBP1-222ENST00000600320 CASQ1P31415 396 aa20.42■□□□□ 0.86
SHKBP1-222ENST00000600320 OTUD4Q01804 1114 aaKnown RBP20.42■□□□□ 0.86
SHKBP1-222ENST00000600320 IL10RBQ08334 325 aa20.42■□□□□ 0.86
SHKBP1-222ENST00000600320 ENPP2Q13822 863 aa20.42■□□□□ 0.86
SHKBP1-222ENST00000600320 NOMO1Q15155 1222 aa20.42■□□□□ 0.86
SHKBP1-222ENST00000600320 SIX1Q15475 284 aaPredicted RBP20.42■□□□□ 0.86
SHKBP1-222ENST00000600320 FNDC3BQ53EP0 1204 aaKnown RBP20.42■□□□□ 0.86
SHKBP1-222ENST00000600320 RETSATQ6NUM9 610 aa20.42■□□□□ 0.86
SHKBP1-222ENST00000600320 ZNF366Q8N895 744 aa20.42■□□□□ 0.86
SHKBP1-222ENST00000600320 IL17RCQ8NAC3 791 aa20.42■□□□□ 0.86
SHKBP1-222ENST00000600320 P3H4Q92791 437 aa20.42■□□□□ 0.86
SHKBP1-222ENST00000600320 HDAC11Q96DB2 347 aa20.42■□□□□ 0.86
SHKBP1-222ENST00000600320 LGMNQ99538 433 aa20.42■□□□□ 0.86
SHKBP1-222ENST00000600320 MTG2Q9H4K7 406 aa20.42■□□□□ 0.86
SHKBP1-222ENST00000600320 SLC25A13Q9UJS0 675 aa20.42■□□□□ 0.86
SHKBP1-222ENST00000600320 HPCAL4Q9UM19 191 aa20.42■□□□□ 0.86
SHKBP1-222ENST00000600320 HS3ST2Q9Y278 367 aa20.42■□□□□ 0.86
SHKBP1-222ENST00000600320 RAD54BQ9Y620 910 aa20.42■□□□□ 0.86
SHKBP1-222ENST00000600320 STON1Q9Y6Q2 735 aa20.42■□□□□ 0.86
SHKBP1-222ENST00000600320 TTC34A8MYJ7 566 aa20.41■□□□□ 0.86
SHKBP1-222ENST00000600320 ADAM23O75077 832 aa20.41■□□□□ 0.86
SHKBP1-222ENST00000600320 KLF8O95600 359 aaPredicted RBP20.41■□□□□ 0.86
SHKBP1-222ENST00000600320 HLA-EP13747 358 aa20.41■□□□□ 0.86
SHKBP1-222ENST00000600320 VAV1P15498 845 aa20.41■□□□□ 0.86
SHKBP1-222ENST00000600320 PRLRP16471 622 aa20.41■□□□□ 0.86
SHKBP1-222ENST00000600320 TCP1P17987 556 aaKnown RBP20.41■□□□□ 0.86
SHKBP1-222ENST00000600320 MX2P20592 715 aa20.41■□□□□ 0.86
SHKBP1-222ENST00000600320 NR2C2P49116 596 aa20.41■□□□□ 0.86
SHKBP1-222ENST00000600320 SERPINH1P50454 418 aaKnown RBP20.41■□□□□ 0.86
SHKBP1-222ENST00000600320 FAM182AQ5T1J6 154 aa20.41■□□□□ 0.86
SHKBP1-222ENST00000600320 CHPFQ8IZ52 775 aa20.41■□□□□ 0.86
SHKBP1-222ENST00000600320 SYNPOQ8N3V7 929 aa20.41■□□□□ 0.86
SHKBP1-222ENST00000600320 SH2D3CQ8N5H7 860 aa20.41■□□□□ 0.86
SHKBP1-222ENST00000600320 TXNDC5Q8NBS9 432 aaKnown RBP20.41■□□□□ 0.86
SHKBP1-222ENST00000600320 KCNV2Q8TDN2 545 aa20.41■□□□□ 0.86
SHKBP1-222ENST00000600320 TSGA13Q96PP4 275 aa20.41■□□□□ 0.86
SHKBP1-222ENST00000600320 CHRDQ9H2X0 955 aa20.41■□□□□ 0.86
SHKBP1-222ENST00000600320 TMEM245Q9H330 911 aa20.41■□□□□ 0.86
SHKBP1-222ENST00000600320 C10orf88Q9H8K7 445 aa20.41■□□□□ 0.86
SHKBP1-222ENST00000600320 C2orf42Q9NWW7 574 aa20.41■□□□□ 0.86
SHKBP1-222ENST00000600320 DLGAP2Q9P1A6 1054 aa20.41■□□□□ 0.86
SHKBP1-222ENST00000600320 UBA2Q9UBT2 640 aaPredicted RBP20.41■□□□□ 0.86
SHKBP1-222ENST00000600320 PLA2G4CQ9UP65 541 aa20.41■□□□□ 0.86
SHKBP1-222ENST00000600320 FCF1Q9Y324 198 aaKnown RBP20.41■□□□□ 0.86
SHKBP1-222ENST00000600320 SGK1O00141 431 aa20.4■□□□□ 0.86
SHKBP1-222ENST00000600320 CES2O00748 559 aa20.4■□□□□ 0.86
SHKBP1-222ENST00000600320 NCAM2O15394 837 aa20.4■□□□□ 0.86
SHKBP1-222ENST00000600320 ATP9BO43861 1147 aa20.4■□□□□ 0.86
SHKBP1-222ENST00000600320 AOC1P19801 751 aa20.4■□□□□ 0.86
SHKBP1-222ENST00000600320 VASPP50552 380 aaPredicted RBP20.4■□□□□ 0.86
SHKBP1-222ENST00000600320 PPIDQ08752 370 aaKnown RBP20.4■□□□□ 0.86
SHKBP1-222ENST00000600320 PDK1Q15118 436 aa20.4■□□□□ 0.86
SHKBP1-222ENST00000600320 CYTH1Q15438 398 aa20.4■□□□□ 0.86
SHKBP1-222ENST00000600320 LONRF2Q1L5Z9 754 aa20.4■□□□□ 0.86
SHKBP1-222ENST00000600320 ZC3H18Q86VM9 953 aaKnown RBP20.4■□□□□ 0.86
SHKBP1-222ENST00000600320 ATP11CQ8NB49 1132 aa20.4■□□□□ 0.86
SHKBP1-222ENST00000600320 FRS2Q8WU20 508 aa20.4■□□□□ 0.86
SHKBP1-222ENST00000600320 SAR1BQ9Y6B6 198 aa20.4■□□□□ 0.86
SHKBP1-222ENST00000600320 SHROOM3Q8TF72 1996 aa20.39■□□□□ 0.86
SHKBP1-222ENST00000600320 FAM86C2PA6NEL3 165 aa20.39■□□□□ 0.85
SHKBP1-222ENST00000600320 ZSCAN5CA6NGD5 496 aaPredicted RBP20.39■□□□□ 0.85
SHKBP1-222ENST00000600320 PPP1R12AO14974 1030 aaPredicted RBP20.39■□□□□ 0.85
SHKBP1-222ENST00000600320 TMCC1O94876 653 aa20.39■□□□□ 0.85
SHKBP1-222ENST00000600320 COL9A1P20849 921 aa20.39■□□□□ 0.85
SHKBP1-222ENST00000600320 NTSR1P30989 418 aa20.39■□□□□ 0.85
SHKBP1-222ENST00000600320 EIF3EP60228 445 aaKnown RBP20.39■□□□□ 0.85
SHKBP1-222ENST00000600320 ST8SIA6P61647 398 aa20.39■□□□□ 0.85
SHKBP1-222ENST00000600320 SLC20A2Q08357 652 aa20.39■□□□□ 0.85
SHKBP1-222ENST00000600320 PRKD1Q15139 912 aaPredicted RBP20.39■□□□□ 0.85
SHKBP1-222ENST00000600320 DLG2Q15700 870 aa20.39■□□□□ 0.85
SHKBP1-222ENST00000600320 SERPINA13PQ6UXR4 307 aa20.39■□□□□ 0.85
SHKBP1-222ENST00000600320 LRRC49Q8IUZ0 686 aa20.39■□□□□ 0.85
SHKBP1-222ENST00000600320 CCDC13Q8IYE1 715 aa20.39■□□□□ 0.85
SHKBP1-222ENST00000600320 KDM1BQ8NB78 822 aa20.39■□□□□ 0.85
SHKBP1-222ENST00000600320 CCNYQ8ND76 341 aa20.39■□□□□ 0.85
SHKBP1-222ENST00000600320 ATG4AQ8WYN0 398 aa20.39■□□□□ 0.85
SHKBP1-222ENST00000600320 PBXIP1Q96AQ6 731 aa20.39■□□□□ 0.85
SHKBP1-222ENST00000600320 ERLEC1Q96DZ1 483 aa20.39■□□□□ 0.85
SHKBP1-222ENST00000600320 ZNF419Q96HQ0 510 aaPredicted RBP20.39■□□□□ 0.85
SHKBP1-222ENST00000600320 QKIQ96PU8 341 aaKnown RBP eCLIP20.39■□□□□ 0.85
SHKBP1-222ENST00000600320 C11orf16Q9NQ32 467 aa20.39■□□□□ 0.85
SHKBP1-222ENST00000600320 TTC7AQ9ULT0 858 aaPredicted RBP20.39■□□□□ 0.85
SHKBP1-222ENST00000600320 CXorf51AA0A1B0GTR3 108 aa20.38■□□□□ 0.85
SHKBP1-222ENST00000600320 CHURC1-FNTBB4DL54 471 aa20.38■□□□□ 0.85
SHKBP1-222ENST00000600320 H7C0C1 242 aa20.38■□□□□ 0.85
SHKBP1-222ENST00000600320 ZNF821O75541 412 aaPredicted RBP20.38■□□□□ 0.85
SHKBP1-222ENST00000600320 CCNCP24863 283 aa20.38■□□□□ 0.85
SHKBP1-222ENST00000600320 RPS9P46781 194 aaKnown RBP20.38■□□□□ 0.85
SHKBP1-222ENST00000600320 ATP5OP48047 213 aa20.38■□□□□ 0.85
SHKBP1-222ENST00000600320 SLC10A7Q0GE19 358 aa20.38■□□□□ 0.85
SHKBP1-222ENST00000600320 AP1B1Q10567 949 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms