RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 NEK5Q6P3R8 708 aa16.18■□□□□ 0.18
VRK3-221ENST00000600284 STRADAQ7RTN6 431 aa16.18■□□□□ 0.18
VRK3-221ENST00000600284 TFAP2DQ7Z6R9 452 aa16.18■□□□□ 0.18
VRK3-221ENST00000600284 TRIM69Q86WT6 500 aa16.18■□□□□ 0.18
VRK3-221ENST00000600284 EMC1Q8N766 993 aa16.18■□□□□ 0.18
VRK3-221ENST00000600284 OR2A12Q8NGT7 310 aa16.18■□□□□ 0.18
VRK3-221ENST00000600284 SLC30A5Q8TAD4 765 aa16.18■□□□□ 0.18
VRK3-221ENST00000600284 RXFP2Q8WXD0 754 aa16.18■□□□□ 0.18
VRK3-221ENST00000600284 CENPIQ92674 756 aaPredicted RBP16.18■□□□□ 0.18
VRK3-221ENST00000600284 SERAC1Q96JX3 654 aa16.18■□□□□ 0.18
VRK3-221ENST00000600284 PCMTD1Q96MG8 357 aaPredicted RBP16.18■□□□□ 0.18
VRK3-221ENST00000600284 ELF4Q99607 663 aaPredicted RBP16.18■□□□□ 0.18
VRK3-221ENST00000600284 C11orf70Q9BRQ4 267 aa16.18■□□□□ 0.18
VRK3-221ENST00000600284 OSBPL2Q9H1P3 480 aa16.18■□□□□ 0.18
VRK3-221ENST00000600284 PREBQ9HCU5 417 aa16.18■□□□□ 0.18
VRK3-221ENST00000600284 AASDHPPTQ9NRN7 309 aa16.18■□□□□ 0.18
VRK3-221ENST00000600284 ARHGAP20Q9P2F6 1191 aa16.18■□□□□ 0.18
VRK3-221ENST00000600284 KLK13Q9UKR3 277 aa16.18■□□□□ 0.18
VRK3-221ENST00000600284 CEP295Q9C0D2 2601 aa16.18■□□□□ 0.18
VRK3-221ENST00000600284 KNL1Q8NG31 2342 aa16.17■□□□□ 0.18
VRK3-221ENST00000600284 KCNK3O14649 394 aa16.17■□□□□ 0.18
VRK3-221ENST00000600284 YKT6O15498 198 aa16.17■□□□□ 0.18
VRK3-221ENST00000600284 MAGEC1O60732 1142 aa16.17■□□□□ 0.18
VRK3-221ENST00000600284 RTN2O75298 545 aa16.17■□□□□ 0.18
VRK3-221ENST00000600284 PRNPP04156 253 aa16.17■□□□□ 0.18
VRK3-221ENST00000600284 WNT1P04628 370 aa16.17■□□□□ 0.18
VRK3-221ENST00000600284 CALB1P05937 261 aa16.17■□□□□ 0.18
VRK3-221ENST00000600284 CCDC172P0C7W6 258 aa16.17■□□□□ 0.18
VRK3-221ENST00000600284 KRT3P12035 628 aa16.17■□□□□ 0.18
VRK3-221ENST00000600284 CHRNA3P32297 505 aa16.17■□□□□ 0.18
VRK3-221ENST00000600284 ETFBP38117 255 aa16.17■□□□□ 0.18
VRK3-221ENST00000600284 METAP1P53582 386 aa16.17■□□□□ 0.18
VRK3-221ENST00000600284 CNTN1Q12860 1018 aa16.17■□□□□ 0.18
VRK3-221ENST00000600284 OVGP1Q12889 678 aa16.17■□□□□ 0.18
VRK3-221ENST00000600284 PTP4A2Q12974 167 aa16.17■□□□□ 0.18
VRK3-221ENST00000600284 NCAPHQ15003 741 aa16.17■□□□□ 0.18
VRK3-221ENST00000600284 AGBL4Q5VU57 503 aa16.17■□□□□ 0.18
VRK3-221ENST00000600284 NAPEPLDQ6IQ20 393 aa16.17■□□□□ 0.18
VRK3-221ENST00000600284 LAYNQ6UX15 382 aa16.17■□□□□ 0.18
VRK3-221ENST00000600284 SLCO6A1Q86UG4 719 aa16.17■□□□□ 0.18
VRK3-221ENST00000600284 IQCHQ86VS3 1027 aa16.17■□□□□ 0.18
VRK3-221ENST00000600284 PHF13Q86YI8 300 aaPredicted RBP16.17■□□□□ 0.18
VRK3-221ENST00000600284 MFSD2AQ8NA29 543 aa16.17■□□□□ 0.18
VRK3-221ENST00000600284 PCDHB18PQ96TA0 734 aa16.17■□□□□ 0.18
VRK3-221ENST00000600284 CEP44Q9C0F1 390 aa16.17■□□□□ 0.18
VRK3-221ENST00000600284 ERVMER34-1Q9H9K5 563 aa16.17■□□□□ 0.18
VRK3-221ENST00000600284 GDF3Q9NR23 364 aa16.17■□□□□ 0.18
VRK3-221ENST00000600284 ADAM22Q9P0K1 906 aa16.17■□□□□ 0.18
VRK3-221ENST00000600284 OR12D3Q9UGF7 316 aa16.17■□□□□ 0.18
VRK3-221ENST00000600284 FAM170AA1A519 330 aa16.16■□□□□ 0.18
VRK3-221ENST00000600284 K7ERQ8 282 aa16.16■□□□□ 0.18
VRK3-221ENST00000600284 TLR4O00206 839 aa16.16■□□□□ 0.18
VRK3-221ENST00000600284 TNFSF14O43557 240 aa16.16■□□□□ 0.18
VRK3-221ENST00000600284 BNIP3LO60238 219 aa16.16■□□□□ 0.18
VRK3-221ENST00000600284 RNGTTO60942 597 aaKnown RBP16.16■□□□□ 0.18
VRK3-221ENST00000600284 ZMPSTE24O75844 475 aa16.16■□□□□ 0.18
VRK3-221ENST00000600284 DKK1O94907 266 aa16.16■□□□□ 0.18
VRK3-221ENST00000600284 CTSLP07711 333 aa16.16■□□□□ 0.18
VRK3-221ENST00000600284 RRM1P23921 792 aa16.16■□□□□ 0.18
VRK3-221ENST00000600284 RECQLP46063 649 aaPredicted RBP16.16■□□□□ 0.18
VRK3-221ENST00000600284 MAPKAPK2P49137 400 aa16.16■□□□□ 0.18
VRK3-221ENST00000600284 PPP2CBP62714 309 aa16.16■□□□□ 0.18
VRK3-221ENST00000600284 PPP2CAP67775 309 aa16.16■□□□□ 0.18
VRK3-221ENST00000600284 GNA12Q03113 381 aa16.16■□□□□ 0.18
VRK3-221ENST00000600284 CLEC16AQ2KHT3 1053 aa16.16■□□□□ 0.18
VRK3-221ENST00000600284 MANEALQ5VSG8 457 aa16.16■□□□□ 0.18
VRK3-221ENST00000600284 APTXQ7Z2E3 356 aaKnown RBP16.16■□□□□ 0.18
VRK3-221ENST00000600284 OXR1Q8N573 874 aa16.16■□□□□ 0.18
VRK3-221ENST00000600284 OR7D4Q8NG98 312 aa16.16■□□□□ 0.18
VRK3-221ENST00000600284 NAT10Q9H0A0 1025 aaKnown RBP16.16■□□□□ 0.18
VRK3-221ENST00000600284 HSD3B7Q9H2F3 369 aa16.16■□□□□ 0.18
VRK3-221ENST00000600284 ZMIZ1Q9ULJ6 1067 aa16.16■□□□□ 0.18
VRK3-221ENST00000600284 BTBD3Q9Y2F9 522 aa16.16■□□□□ 0.18
VRK3-221ENST00000600284 NYNRINQ9P2P1 1898 aaKnown RBP16.16■□□□□ 0.18
VRK3-221ENST00000600284 CABIN1Q9Y6J0 2220 aa16.15■□□□□ 0.18
VRK3-221ENST00000600284 SIGLEC16A6NMB1 481 aa16.15■□□□□ 0.18
VRK3-221ENST00000600284 CBX4O00257 560 aa16.15■□□□□ 0.18
VRK3-221ENST00000600284 PLK4O00444 970 aa16.15■□□□□ 0.18
VRK3-221ENST00000600284 WNT9AO14904 365 aa16.15■□□□□ 0.18
VRK3-221ENST00000600284 SMAD6O43541 496 aaKnown RBP16.15■□□□□ 0.18
VRK3-221ENST00000600284 RHOQP17081 205 aa16.15■□□□□ 0.18
VRK3-221ENST00000600284 ARRB1P49407 418 aaPredicted RBP16.15■□□□□ 0.18
VRK3-221ENST00000600284 NXPH1P58417 271 aa16.15■□□□□ 0.18
VRK3-221ENST00000600284 CDO1Q16878 200 aa16.15■□□□□ 0.18
VRK3-221ENST00000600284 C15orf59Q2T9L4 293 aaPredicted RBP16.15■□□□□ 0.18
VRK3-221ENST00000600284 SETMARQ53H47 684 aaPredicted RBP16.15■□□□□ 0.18
VRK3-221ENST00000600284 PIP5KL1Q5T9C9 394 aa16.15■□□□□ 0.18
VRK3-221ENST00000600284 C22orf39Q6P5X5 142 aa16.15■□□□□ 0.18
VRK3-221ENST00000600284 PLPP6Q8IY26 295 aa16.15■□□□□ 0.18
VRK3-221ENST00000600284 PCDH20Q8N6Y1 951 aaKnown RBP16.15■□□□□ 0.18
VRK3-221ENST00000600284 PNPLA1Q8N8W4 532 aa16.15■□□□□ 0.18
VRK3-221ENST00000600284 C3orf20Q8ND61 904 aa16.15■□□□□ 0.18
VRK3-221ENST00000600284 JOSD2Q8TAC2 188 aa16.15■□□□□ 0.18
VRK3-221ENST00000600284 NTAN1Q96AB6 310 aa16.15■□□□□ 0.18
VRK3-221ENST00000600284 PPP1R16AQ96I34 528 aa16.15■□□□□ 0.18
VRK3-221ENST00000600284 AGPAT1Q99943 283 aa16.15■□□□□ 0.18
VRK3-221ENST00000600284 SPON2Q9BUD6 331 aa16.15■□□□□ 0.18
VRK3-221ENST00000600284 SELENOOQ9BVL4 669 aa16.15■□□□□ 0.18
VRK3-221ENST00000600284 HDAC8Q9BY41 377 aa16.15■□□□□ 0.18
VRK3-221ENST00000600284 ATP13A1Q9HD20 1204 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms