RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	POLD3	Q15054	466 aa	Predicted RBP	22.43	■■□□□ 1.18
LTBP4-227	ENST00000600026	PTPRN	Q16849	979 aa		22.43	■■□□□ 1.18
LTBP4-227	ENST00000600026	HSF5	Q4G112	596 aa	Predicted RBP	22.43	■■□□□ 1.18
LTBP4-227	ENST00000600026	NPNT	Q6UXI9	565 aa		22.43	■■□□□ 1.18
LTBP4-227	ENST00000600026	TRMT11	Q7Z4G4	463 aa	Known RBP	22.43	■■□□□ 1.18
LTBP4-227	ENST00000600026	CHPF	Q8IZ52	775 aa		22.43	■■□□□ 1.18
LTBP4-227	ENST00000600026	SPEM1	Q8N4L4	309 aa		22.43	■■□□□ 1.18
LTBP4-227	ENST00000600026	CCDC33	Q8N5R6	958 aa		22.43	■■□□□ 1.18
LTBP4-227	ENST00000600026	NPW	Q8N729	165 aa		22.43	■■□□□ 1.18
LTBP4-227	ENST00000600026	DTWD2	Q8NBA8	298 aa		22.43	■■□□□ 1.18
LTBP4-227	ENST00000600026	TXNDC5	Q8NBS9	432 aa	Known RBP	22.43	■■□□□ 1.18
LTBP4-227	ENST00000600026	ARHGEF2	Q92974	986 aa	Known RBP	22.43	■■□□□ 1.18
LTBP4-227	ENST00000600026	HAUS1	Q96CS2	278 aa		22.43	■■□□□ 1.18
LTBP4-227	ENST00000600026	SPON2	Q9BUD6	331 aa		22.43	■■□□□ 1.18
LTBP4-227	ENST00000600026	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	22.43	■■□□□ 1.18
LTBP4-227	ENST00000600026	KLC2	Q9H0B6	622 aa		22.43	■■□□□ 1.18
LTBP4-227	ENST00000600026	MAGEH1	Q9H213	219 aa		22.43	■■□□□ 1.18
LTBP4-227	ENST00000600026	HOMER3	Q9NSC5	361 aa		22.43	■■□□□ 1.18
LTBP4-227	ENST00000600026	C2orf42	Q9NWW7	574 aa		22.43	■■□□□ 1.18
LTBP4-227	ENST00000600026	CACNA2D2	Q9NY47	1150 aa		22.43	■■□□□ 1.18
LTBP4-227	ENST00000600026	SMARCAL1	Q9NZC9	954 aa		22.43	■■□□□ 1.18
LTBP4-227	ENST00000600026	ERVW-1	Q9UQF0	538 aa		22.43	■■□□□ 1.18
LTBP4-227	ENST00000600026	ARHGAP42	A6NI28	874 aa		22.42	■■□□□ 1.18
LTBP4-227	ENST00000600026	SGK1	O00141	431 aa		22.42	■■□□□ 1.18
LTBP4-227	ENST00000600026	KRIT1	O00522	736 aa		22.42	■■□□□ 1.18
LTBP4-227	ENST00000600026	SNAP91	O60641	907 aa		22.42	■■□□□ 1.18
LTBP4-227	ENST00000600026	ATG13	O75143	517 aa		22.42	■■□□□ 1.18
LTBP4-227	ENST00000600026	MX2	P20592	715 aa		22.42	■■□□□ 1.18
LTBP4-227	ENST00000600026	GLDC	P23378	1020 aa		22.42	■■□□□ 1.18
LTBP4-227	ENST00000600026	ETFB	P38117	255 aa		22.42	■■□□□ 1.18
LTBP4-227	ENST00000600026	IL12RB1	P42701	662 aa		22.42	■■□□□ 1.18
LTBP4-227	ENST00000600026	WAS	P42768	502 aa		22.42	■■□□□ 1.18
LTBP4-227	ENST00000600026	OTUD4	Q01804	1114 aa	Known RBP	22.42	■■□□□ 1.18
LTBP4-227	ENST00000600026	NHLH1	Q02575	133 aa		22.42	■■□□□ 1.18
LTBP4-227	ENST00000600026	GBE1	Q04446	702 aa		22.42	■■□□□ 1.18
LTBP4-227	ENST00000600026	SULT2A1	Q06520	285 aa		22.42	■■□□□ 1.18
LTBP4-227	ENST00000600026	PARP15	Q460N3	678 aa		22.42	■■□□□ 1.18
LTBP4-227	ENST00000600026	CELF6	Q96J87	481 aa	Known RBP	22.42	■■□□□ 1.18
LTBP4-227	ENST00000600026	MRGPRX3	Q96LB0	322 aa		22.42	■■□□□ 1.18
LTBP4-227	ENST00000600026	C2orf49	Q9BVC5	232 aa	Predicted RBP	22.42	■■□□□ 1.18
LTBP4-227	ENST00000600026	ACE2	Q9BYF1	805 aa	Predicted RBP	22.42	■■□□□ 1.18
LTBP4-227	ENST00000600026	LRRC19	Q9H756	370 aa		22.42	■■□□□ 1.18
LTBP4-227	ENST00000600026	POLR3B	Q9NW08	1133 aa	Predicted RBP	22.42	■■□□□ 1.18
LTBP4-227	ENST00000600026	SPATA6	Q9NWH7	488 aa	Predicted RBP	22.42	■■□□□ 1.18
LTBP4-227	ENST00000600026	DTL	Q9NZJ0	730 aa		22.42	■■□□□ 1.18
LTBP4-227	ENST00000600026	VPS51	Q9UID3	782 aa		22.42	■■□□□ 1.18
LTBP4-227	ENST00000600026	MMP17	Q9ULZ9	603 aa		22.42	■■□□□ 1.18
LTBP4-227	ENST00000600026	ZDBF2	Q9HCK1	2354 aa		22.42	■■□□□ 1.18
LTBP4-227	ENST00000600026	RASA4B	C9J798	803 aa		22.41	■■□□□ 1.18
LTBP4-227	ENST00000600026	DFFA	O00273	331 aa		22.41	■■□□□ 1.18
LTBP4-227	ENST00000600026	MCF2L	O15068	1137 aa		22.41	■■□□□ 1.18
LTBP4-227	ENST00000600026	NPC1	O15118	1278 aa		22.41	■■□□□ 1.18
LTBP4-227	ENST00000600026	RASA4	O43374	803 aa		22.41	■■□□□ 1.18
LTBP4-227	ENST00000600026	ADAM23	O75077	832 aa		22.41	■■□□□ 1.18
LTBP4-227	ENST00000600026	SRPRA	P08240	638 aa	Known RBP	22.41	■■□□□ 1.18
LTBP4-227	ENST00000600026	PECAM1	P16284	738 aa	Predicted RBP	22.41	■■□□□ 1.18
LTBP4-227	ENST00000600026	NTSR1	P30989	418 aa		22.41	■■□□□ 1.18
LTBP4-227	ENST00000600026	STK19	P49842	368 aa	Predicted RBP	22.41	■■□□□ 1.18
LTBP4-227	ENST00000600026	ECT2L	Q008S8	904 aa		22.41	■■□□□ 1.18
LTBP4-227	ENST00000600026	PDK1	Q15118	436 aa		22.41	■■□□□ 1.18
LTBP4-227	ENST00000600026	NOMO1	Q15155	1222 aa		22.41	■■□□□ 1.18
LTBP4-227	ENST00000600026	E2F5	Q15329	346 aa		22.41	■■□□□ 1.18
LTBP4-227	ENST00000600026	FNDC3B	Q53EP0	1204 aa	Known RBP	22.41	■■□□□ 1.18
LTBP4-227	ENST00000600026	EOGT	Q5NDL2	527 aa		22.41	■■□□□ 1.18
LTBP4-227	ENST00000600026	IL31	Q6EBC2	164 aa		22.41	■■□□□ 1.18
LTBP4-227	ENST00000600026	ZNF354C	Q86Y25	554 aa		22.41	■■□□□ 1.18
LTBP4-227	ENST00000600026	LRRC49	Q8IUZ0	686 aa		22.41	■■□□□ 1.18
LTBP4-227	ENST00000600026	ARHGAP12	Q8IWW6	846 aa		22.41	■■□□□ 1.18
LTBP4-227	ENST00000600026	NETO2	Q8NC67	525 aa		22.41	■■□□□ 1.18
LTBP4-227	ENST00000600026	ACTL9	Q8TC94	416 aa		22.41	■■□□□ 1.18
LTBP4-227	ENST00000600026	HMCES	Q96FZ2	354 aa		22.41	■■□□□ 1.18
LTBP4-227	ENST00000600026	MYO19	Q96H55	970 aa		22.41	■■□□□ 1.18
LTBP4-227	ENST00000600026	GABRG3	Q99928	467 aa		22.41	■■□□□ 1.18
LTBP4-227	ENST00000600026	SLC25A13	Q9UJS0	675 aa		22.41	■■□□□ 1.18
LTBP4-227	ENST00000600026	PLA2G4C	Q9UP65	541 aa		22.41	■■□□□ 1.18
LTBP4-227	ENST00000600026	STON1	Q9Y6Q2	735 aa		22.41	■■□□□ 1.18
LTBP4-227	ENST00000600026	ZNF318	Q5VUA4	2279 aa		22.4	■■□□□ 1.18
LTBP4-227	ENST00000600026	WASH3P	C4AMC7	463 aa		22.4	■■□□□ 1.18
LTBP4-227	ENST00000600026	PPP1R12A	O14974	1030 aa	Predicted RBP	22.4	■■□□□ 1.18
LTBP4-227	ENST00000600026	SATB1	Q01826	763 aa		22.4	■■□□□ 1.18
LTBP4-227	ENST00000600026	SLC10A2	Q12908	348 aa	Predicted RBP	22.4	■■□□□ 1.18
LTBP4-227	ENST00000600026	ENPP2	Q13822	863 aa		22.4	■■□□□ 1.18
LTBP4-227	ENST00000600026	AFMID	Q63HM1	303 aa		22.4	■■□□□ 1.18
LTBP4-227	ENST00000600026	SYT13	Q7L8C5	426 aa		22.4	■■□□□ 1.18
LTBP4-227	ENST00000600026	MNS1	Q8NEH6	495 aa		22.4	■■□□□ 1.18
LTBP4-227	ENST00000600026	RPL10L	Q96L21	214 aa	Known RBP	22.4	■■□□□ 1.18
LTBP4-227	ENST00000600026	AP1M1	Q9BXS5	423 aa		22.4	■■□□□ 1.18
LTBP4-227	ENST00000600026	SLC39A8	Q9C0K1	460 aa		22.4	■■□□□ 1.18
LTBP4-227	ENST00000600026	BRD8	Q9H0E9	1235 aa		22.4	■■□□□ 1.18
LTBP4-227	ENST00000600026	SAE1	Q9UBE0	346 aa	Predicted RBP	22.4	■■□□□ 1.18
LTBP4-227	ENST00000600026	SHROOM3	Q8TF72	1996 aa		22.39	■■□□□ 1.18
LTBP4-227	ENST00000600026	CBX4	O00257	560 aa		22.39	■■□□□ 1.17
LTBP4-227	ENST00000600026	PDE2A	O00408	941 aa	Predicted RBP	22.39	■■□□□ 1.17
LTBP4-227	ENST00000600026	ZMPSTE24	O75844	475 aa		22.39	■■□□□ 1.17
LTBP4-227	ENST00000600026	HOXB2	P14652	356 aa		22.39	■■□□□ 1.17
LTBP4-227	ENST00000600026	PRKCH	P24723	683 aa		22.39	■■□□□ 1.17
LTBP4-227	ENST00000600026	CCR3	P51677	355 aa		22.39	■■□□□ 1.17
LTBP4-227	ENST00000600026	EIF3E	P60228	445 aa	Known RBP	22.39	■■□□□ 1.17
LTBP4-227	ENST00000600026	ST8SIA6	P61647	398 aa		22.39	■■□□□ 1.17
LTBP4-227	ENST00000600026	ARF5	P84085	180 aa		22.39	■■□□□ 1.17

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms