RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 RAP1GAP2Q684P5 730 aa14.11□□□□□ -0.15
IRF3-225ENST00000600022 NUGGCQ68CJ6 796 aa14.11□□□□□ -0.15
IRF3-225ENST00000600022 DENND1BQ6P3S1 775 aa14.11□□□□□ -0.15
IRF3-225ENST00000600022 ZNF662Q6ZS27 426 aa14.11□□□□□ -0.15
IRF3-225ENST00000600022 NYAP1Q6ZVC0 841 aa14.11□□□□□ -0.15
IRF3-225ENST00000600022 ZNF571Q7Z3V5 609 aaPredicted RBP14.11□□□□□ -0.15
IRF3-225ENST00000600022 TAC4Q86UU9 113 aa14.11□□□□□ -0.15
IRF3-225ENST00000600022 CIR1Q86X95 450 aaPredicted RBP14.11□□□□□ -0.15
IRF3-225ENST00000600022 SPATS2Q86XZ4 545 aaKnown RBP14.11□□□□□ -0.15
IRF3-225ENST00000600022 LGI2Q8N0V4 545 aa14.11□□□□□ -0.15
IRF3-225ENST00000600022 PDCD7Q8N8D1 485 aaKnown RBP14.11□□□□□ -0.15
IRF3-225ENST00000600022 HJURPQ8NCD3 748 aaPredicted RBP14.11□□□□□ -0.15
IRF3-225ENST00000600022 GOLGA1Q92805 767 aa14.11□□□□□ -0.15
IRF3-225ENST00000600022 OMDQ99983 421 aa14.11□□□□□ -0.15
IRF3-225ENST00000600022 FBRSQ9HAH7 460 aa14.11□□□□□ -0.15
IRF3-225ENST00000600022 SCUBE2Q9NQ36 999 aa14.11□□□□□ -0.15
IRF3-225ENST00000600022 AASDHPPTQ9NRN7 309 aa14.11□□□□□ -0.15
IRF3-225ENST00000600022 TJP2Q9UDY2 1190 aa14.11□□□□□ -0.15
IRF3-225ENST00000600022 FTSJ1Q9UET6 329 aa14.11□□□□□ -0.15
IRF3-225ENST00000600022 NENFQ9UMX5 172 aa14.11□□□□□ -0.15
IRF3-225ENST00000600022 PCDHA13Q9Y5I0 950 aa14.11□□□□□ -0.15
IRF3-225ENST00000600022 CFAP46Q8IYW2 2715 aa14.11□□□□□ -0.15
IRF3-225ENST00000600022 A0A087WV48 116 aa14.1□□□□□ -0.15
IRF3-225ENST00000600022 ENC1O14682 589 aa14.1□□□□□ -0.15
IRF3-225ENST00000600022 IRAK2O43187 625 aa14.1□□□□□ -0.15
IRF3-225ENST00000600022 PAPSS1O43252 624 aaPredicted RBP14.1□□□□□ -0.15
IRF3-225ENST00000600022 TLX3O43711 291 aaPredicted RBP14.1□□□□□ -0.15
IRF3-225ENST00000600022 LUC7L3O95232 432 aaKnown RBP14.1□□□□□ -0.15
IRF3-225ENST00000600022 KRT5P13647 590 aa14.1□□□□□ -0.15
IRF3-225ENST00000600022 CYP11B1P15538 503 aa14.1□□□□□ -0.15
IRF3-225ENST00000600022 TNFAIP3P21580 790 aa14.1□□□□□ -0.15
IRF3-225ENST00000600022 MZF1P28698 734 aaPredicted RBP14.1□□□□□ -0.15
IRF3-225ENST00000600022 CD38P28907 300 aa14.1□□□□□ -0.15
IRF3-225ENST00000600022 GPD2P43304 727 aa14.1□□□□□ -0.15
IRF3-225ENST00000600022 IRAK1P51617 712 aa14.1□□□□□ -0.15
IRF3-225ENST00000600022 ST8SIA6P61647 398 aa14.1□□□□□ -0.15
IRF3-225ENST00000600022 GNG11P61952 73 aa14.1□□□□□ -0.15
IRF3-225ENST00000600022 ETF1P62495 437 aaKnown RBP14.1□□□□□ -0.15
IRF3-225ENST00000600022 ECT2LQ008S8 904 aa14.1□□□□□ -0.15
IRF3-225ENST00000600022 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.1□□□□□ -0.15
IRF3-225ENST00000600022 OR52K2Q8NGK3 314 aa14.1□□□□□ -0.15
IRF3-225ENST00000600022 OR2T34Q8NGX1 318 aa14.1□□□□□ -0.15
IRF3-225ENST00000600022 OR14C36Q8NHC7 312 aa14.1□□□□□ -0.15
IRF3-225ENST00000600022 CNDP2Q96KP4 475 aaKnown RBP14.1□□□□□ -0.15
IRF3-225ENST00000600022 ST7Q9NRC1 585 aa14.1□□□□□ -0.15
IRF3-225ENST00000600022 SEPT11Q9NVA2 429 aaKnown RBP14.1□□□□□ -0.15
IRF3-225ENST00000600022 ADAMTS1Q9UHI8 967 aa14.1□□□□□ -0.15
IRF3-225ENST00000600022 SARDHQ9UL12 918 aa14.1□□□□□ -0.15
IRF3-225ENST00000600022 TLR6Q9Y2C9 796 aa14.1□□□□□ -0.15
IRF3-225ENST00000600022 CA5BQ9Y2D0 317 aa14.1□□□□□ -0.15
IRF3-225ENST00000600022 RAI2Q9Y5P3 530 aa14.1□□□□□ -0.15
IRF3-225ENST00000600022 RTN2O75298 545 aa14.09□□□□□ -0.15
IRF3-225ENST00000600022 LDOC1O95751 146 aaPredicted RBP14.09□□□□□ -0.15
IRF3-225ENST00000600022 ITGAVP06756 1048 aa14.09□□□□□ -0.15
IRF3-225ENST00000600022 MAT2AP31153 395 aaKnown RBP14.09□□□□□ -0.15
IRF3-225ENST00000600022 CASQ1P31415 396 aa14.09□□□□□ -0.15
IRF3-225ENST00000600022 DRD3P35462 400 aa14.09□□□□□ -0.15
IRF3-225ENST00000600022 RPL34P49207 117 aaKnown RBP14.09□□□□□ -0.15
IRF3-225ENST00000600022 ADPRHP54922 357 aa14.09□□□□□ -0.15
IRF3-225ENST00000600022 SEMG2Q02383 582 aa14.09□□□□□ -0.15
IRF3-225ENST00000600022 TARDBPQ13148 414 aaKnown RBP eCLIP14.09□□□□□ -0.152e-6■■■■□ 22.3
IRF3-225ENST00000600022 CDH18Q13634 790 aa14.09□□□□□ -0.15
IRF3-225ENST00000600022 POM121L1PQ3SYA9 428 aa14.09□□□□□ -0.15
IRF3-225ENST00000600022 NOP9Q86U38 636 aaKnown RBP14.09□□□□□ -0.15
IRF3-225ENST00000600022 SLC47A2Q86VL8 602 aa14.09□□□□□ -0.15
IRF3-225ENST00000600022 ZNF677Q86XU0 584 aa14.09□□□□□ -0.15
IRF3-225ENST00000600022 PIP4K2CQ8TBX8 421 aa14.09□□□□□ -0.15
IRF3-225ENST00000600022 FAM149B1Q96BN6 582 aa14.09□□□□□ -0.15
IRF3-225ENST00000600022 SERAC1Q96JX3 654 aa14.09□□□□□ -0.15
IRF3-225ENST00000600022 HSFY1Q96LI6 401 aa14.09□□□□□ -0.15
IRF3-225ENST00000600022 SCML1Q9UN30 329 aa14.09□□□□□ -0.15
IRF3-225ENST00000600022 REXO2Q9Y3B8 237 aaKnown RBP14.09□□□□□ -0.15
IRF3-225ENST00000600022 ATMQ13315 3056 aa14.09□□□□□ -0.15
IRF3-225ENST00000600022 DOCK9Q9BZ29 2069 aa14.08□□□□□ -0.15
IRF3-225ENST00000600022 TBC1D3DA0A087WVF3 549 aa14.08□□□□□ -0.16
IRF3-225ENST00000600022 TBC1D3IA0A087WXS9 549 aa14.08□□□□□ -0.16
IRF3-225ENST00000600022 TBC1D3EA0A087X179 549 aa14.08□□□□□ -0.16
IRF3-225ENST00000600022 TBC1D3KA0A087X1G2 549 aa14.08□□□□□ -0.16
IRF3-225ENST00000600022 TARSL2A2RTX5 802 aaKnown RBP14.08□□□□□ -0.16
IRF3-225ENST00000600022 TBC1D3FA6NER0 549 aaPredicted RBP14.08□□□□□ -0.16
IRF3-225ENST00000600022 LRRC72A6NJI9 287 aa14.08□□□□□ -0.16
IRF3-225ENST00000600022 TBC1D3LB9A6J9 549 aa14.08□□□□□ -0.16
IRF3-225ENST00000600022 TLR4O00206 839 aa14.08□□□□□ -0.16
IRF3-225ENST00000600022 RNF103O00237 685 aa14.08□□□□□ -0.16
IRF3-225ENST00000600022 RNASEH1O60930 286 aaKnown RBP14.08□□□□□ -0.16
IRF3-225ENST00000600022 IL1BP01584 269 aa14.08□□□□□ -0.16
IRF3-225ENST00000600022 ASLP04424 464 aa14.08□□□□□ -0.16
IRF3-225ENST00000600022 TBC1D3HP0C7X1 549 aa14.08□□□□□ -0.16
IRF3-225ENST00000600022 JUPP14923 745 aa14.08□□□□□ -0.16
IRF3-225ENST00000600022 PDGFRAP16234 1089 aa14.08□□□□□ -0.16
IRF3-225ENST00000600022 GOT1P17174 413 aa14.08□□□□□ -0.16
IRF3-225ENST00000600022 ABCB4P21439 1286 aa14.08□□□□□ -0.16
IRF3-225ENST00000600022 TACR2P21452 398 aa14.08□□□□□ -0.16
IRF3-225ENST00000600022 EIF2S3P41091 472 aaKnown RBP14.08□□□□□ -0.16
IRF3-225ENST00000600022 ACADVLP49748 655 aa14.08□□□□□ -0.16
IRF3-225ENST00000600022 NXPH1P58417 271 aa14.08□□□□□ -0.16
IRF3-225ENST00000600022 CDR2Q01850 454 aa14.08□□□□□ -0.16
IRF3-225ENST00000600022 IFI16Q16666 785 aaKnown RBP14.08□□□□□ -0.16
IRF3-225ENST00000600022 TBC1D3GQ6DHY5 549 aa14.08□□□□□ -0.16
IRF3-225ENST00000600022 TBC1D3CQ6IPX1 549 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms