RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 MCF2LO15068 1137 aa23.11■■□□□ 1.29
CCDC9-204ENST00000599398 ALOX15BO15296 676 aa23.11■■□□□ 1.29
CCDC9-204ENST00000599398 SMAD6O43541 496 aaKnown RBP23.11■■□□□ 1.29
CCDC9-204ENST00000599398 CREB3O43889 395 aa23.11■■□□□ 1.29
CCDC9-204ENST00000599398 TPM3P06753 285 aa23.11■■□□□ 1.29
CCDC9-204ENST00000599398 ETFBP38117 255 aa23.11■■□□□ 1.29
CCDC9-204ENST00000599398 CLCN6P51797 869 aa23.11■■□□□ 1.29
CCDC9-204ENST00000599398 METAP1P53582 386 aa23.11■■□□□ 1.29
CCDC9-204ENST00000599398 GRIK2Q13002 908 aa23.11■■□□□ 1.29
CCDC9-204ENST00000599398 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.11■■□□□ 1.29
CCDC9-204ENST00000599398 NLRP14Q86W24 1093 aa23.11■■□□□ 1.29
CCDC9-204ENST00000599398 PIP4K2CQ8TBX8 421 aa23.11■■□□□ 1.29
CCDC9-204ENST00000599398 IQCDQ96DY2 449 aa23.11■■□□□ 1.29
CCDC9-204ENST00000599398 NDFIP2Q9NV92 336 aa23.11■■□□□ 1.29
CCDC9-204ENST00000599398 TMEM248Q9NWD8 314 aa23.11■■□□□ 1.29
CCDC9-204ENST00000599398 CNOT8Q9UFF9 292 aaKnown RBP23.11■■□□□ 1.29
CCDC9-204ENST00000599398 SARDHQ9UL12 918 aa23.11■■□□□ 1.29
CCDC9-204ENST00000599398 FZD10Q9ULW2 581 aa23.11■■□□□ 1.29
CCDC9-204ENST00000599398 BZW2Q9Y6E2 419 aaKnown RBP23.11■■□□□ 1.29
CCDC9-204ENST00000599398 PLK4O00444 970 aa23.1■■□□□ 1.29
CCDC9-204ENST00000599398 OPHN1O60890 802 aa23.1■■□□□ 1.29
CCDC9-204ENST00000599398 KCNK5O95279 499 aa23.1■■□□□ 1.29
CCDC9-204ENST00000599398 EPHB2P29323 1055 aa23.1■■□□□ 1.29
CCDC9-204ENST00000599398 L1CAMP32004 1257 aa23.1■■□□□ 1.29
CCDC9-204ENST00000599398 ACVRL1P37023 503 aa23.1■■□□□ 1.29
CCDC9-204ENST00000599398 RECQLP46063 649 aaPredicted RBP23.1■■□□□ 1.29
CCDC9-204ENST00000599398 NOVA1P51513 510 aaKnown RBP23.1■■□□□ 1.29
CCDC9-204ENST00000599398 ZBED6P86452 979 aa23.1■■□□□ 1.29
CCDC9-204ENST00000599398 PSAPL1Q6NUJ1 521 aa23.1■■□□□ 1.29
CCDC9-204ENST00000599398 C22orf39Q6P5X5 142 aa23.1■■□□□ 1.29
CCDC9-204ENST00000599398 VPS36Q86VN1 386 aa23.1■■□□□ 1.29
CCDC9-204ENST00000599398 OR2T34Q8NGX1 318 aa23.1■■□□□ 1.29
CCDC9-204ENST00000599398 SYN2Q92777 582 aaPredicted RBP23.1■■□□□ 1.29
CCDC9-204ENST00000599398 TRIM11Q96F44 468 aa23.1■■□□□ 1.29
CCDC9-204ENST00000599398 EPAS1Q99814 870 aa23.1■■□□□ 1.29
CCDC9-204ENST00000599398 XPO4Q9C0E2 1151 aaKnown RBP23.1■■□□□ 1.29
CCDC9-204ENST00000599398 TNKS2Q9H2K2 1166 aa23.1■■□□□ 1.29
CCDC9-204ENST00000599398 TSPY26PQ9H489 355 aa23.1■■□□□ 1.29
CCDC9-204ENST00000599398 RETREG1Q9H6L5 497 aa23.1■■□□□ 1.29
CCDC9-204ENST00000599398 MYO1AQ9UBC5 1043 aa23.1■■□□□ 1.29
CCDC9-204ENST00000599398 PPM1HQ9ULR3 514 aa23.1■■□□□ 1.29
CCDC9-204ENST00000599398 CAPN11Q9UMQ6 739 aa23.1■■□□□ 1.29
CCDC9-204ENST00000599398 LUC7L2Q9Y383 392 aaKnown RBP23.1■■□□□ 1.29
CCDC9-204ENST00000599398 SLCO1B1Q9Y6L6 691 aa23.1■■□□□ 1.29
CCDC9-204ENST00000599398 CD27P26842 260 aa23.09■■□□□ 1.29
CCDC9-204ENST00000599398 DRD3P35462 400 aa23.09■■□□□ 1.29
CCDC9-204ENST00000599398 CSNK1EP49674 416 aaKnown RBP23.09■■□□□ 1.29
CCDC9-204ENST00000599398 AFF3P51826 1226 aaKnown RBP23.09■■□□□ 1.29
CCDC9-204ENST00000599398 ADPRHP54922 357 aa23.09■■□□□ 1.29
CCDC9-204ENST00000599398 AIF1P55008 147 aa23.09■■□□□ 1.29
CCDC9-204ENST00000599398 HGSNATQ68CP4 663 aa23.09■■□□□ 1.29
CCDC9-204ENST00000599398 ZNF354CQ86Y25 554 aa23.09■■□□□ 1.29
CCDC9-204ENST00000599398 OR2A12Q8NGT7 310 aa23.09■■□□□ 1.29
CCDC9-204ENST00000599398 C1orf216Q8TAB5 229 aa23.09■■□□□ 1.29
CCDC9-204ENST00000599398 ZDHHC5Q9C0B5 715 aa23.09■■□□□ 1.29
CCDC9-204ENST00000599398 NEU3Q9UQ49 428 aa23.09■■□□□ 1.29
CCDC9-204ENST00000599398 SCINQ9Y6U3 715 aa23.09■■□□□ 1.29
CCDC9-204ENST00000599398 CHD5Q8TDI0 1954 aa23.09■■□□□ 1.29
CCDC9-204ENST00000599398 TBC1D3DA0A087WVF3 549 aa23.08■■□□□ 1.29
CCDC9-204ENST00000599398 TBC1D3IA0A087WXS9 549 aa23.08■■□□□ 1.29
CCDC9-204ENST00000599398 TBC1D3EA0A087X179 549 aa23.08■■□□□ 1.29
CCDC9-204ENST00000599398 TBC1D3KA0A087X1G2 549 aa23.08■■□□□ 1.29
CCDC9-204ENST00000599398 TBC1D3FA6NER0 549 aaPredicted RBP23.08■■□□□ 1.29
CCDC9-204ENST00000599398 TMEM191CA6NGB0 347 aa23.08■■□□□ 1.29
CCDC9-204ENST00000599398 TBC1D3LB9A6J9 549 aa23.08■■□□□ 1.29
CCDC9-204ENST00000599398 RAMP2O60895 175 aa23.08■■□□□ 1.29
CCDC9-204ENST00000599398 ZMPSTE24O75844 475 aa23.08■■□□□ 1.29
CCDC9-204ENST00000599398 SERPING1P05155 500 aa23.08■■□□□ 1.29
CCDC9-204ENST00000599398 IGHV4-34P06331 123 aa23.08■■□□□ 1.29
CCDC9-204ENST00000599398 TBC1D3HP0C7X1 549 aa23.08■■□□□ 1.29
CCDC9-204ENST00000599398 MYBL1P10243 752 aa23.08■■□□□ 1.29
CCDC9-204ENST00000599398 CHRNA3P32297 505 aa23.08■■□□□ 1.29
CCDC9-204ENST00000599398 SERPINH1P50454 418 aaKnown RBP23.08■■□□□ 1.29
CCDC9-204ENST00000599398 DNA2P51530 1060 aa23.08■■□□□ 1.29
CCDC9-204ENST00000599398 ARF5P84085 180 aa23.08■■□□□ 1.29
CCDC9-204ENST00000599398 SLC20A2Q08357 652 aa23.08■■□□□ 1.29
CCDC9-204ENST00000599398 TEAD4Q15561 434 aa23.08■■□□□ 1.29
CCDC9-204ENST00000599398 TBC1D3GQ6DHY5 549 aa23.08■■□□□ 1.29
CCDC9-204ENST00000599398 TBC1D3CQ6IPX1 549 aa23.08■■□□□ 1.29
CCDC9-204ENST00000599398 TBC1D3Q8IZP1 549 aaPredicted RBP23.08■■□□□ 1.29
CCDC9-204ENST00000599398 ARHGEF2Q92974 986 aaKnown RBP23.08■■□□□ 1.29
CCDC9-204ENST00000599398 MAGEH1Q9H213 219 aa23.08■■□□□ 1.29
CCDC9-204ENST00000599398 TM9SF3Q9HD45 589 aa23.08■■□□□ 1.29
CCDC9-204ENST00000599398 HPCAL4Q9UM19 191 aa23.08■■□□□ 1.29
CCDC9-204ENST00000599398 A0A1B0GVT2 93 aa23.07■■□□□ 1.28
CCDC9-204ENST00000599398 KPNA3O00505 521 aaPredicted RBP23.07■■□□□ 1.28
CCDC9-204ENST00000599398 RNF8O76064 485 aa23.07■■□□□ 1.28
CCDC9-204ENST00000599398 GYPCP04921 128 aa23.07■■□□□ 1.28
CCDC9-204ENST00000599398 CNTN1Q12860 1018 aa23.07■■□□□ 1.28
CCDC9-204ENST00000599398 POLD3Q15054 466 aaPredicted RBP23.07■■□□□ 1.28
CCDC9-204ENST00000599398 NFKBIBQ15653 356 aa23.07■■□□□ 1.28
CCDC9-204ENST00000599398 ADAT2Q7Z6V5 191 aaKnown RBP23.07■■□□□ 1.28
CCDC9-204ENST00000599398 RTL3Q8N8U3 475 aaKnown RBP23.07■■□□□ 1.28
CCDC9-204ENST00000599398 CHST14Q8NCH0 376 aa23.07■■□□□ 1.28
CCDC9-204ENST00000599398 ACE2Q9BYF1 805 aaPredicted RBP23.07■■□□□ 1.28
CCDC9-204ENST00000599398 TRIM7Q9C029 511 aa23.07■■□□□ 1.28
CCDC9-204ENST00000599398 ISCUQ9H1K1 167 aa23.07■■□□□ 1.28
CCDC9-204ENST00000599398 MRPL47Q9HD33 250 aaKnown RBP23.07■■□□□ 1.28
CCDC9-204ENST00000599398 GPATCH2LQ9NWQ4 482 aa23.07■■□□□ 1.28
CCDC9-204ENST00000599398 PCSK1NQ9UHG2 260 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms