RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 ARL13BQ3SXY8 428 aa10.03□□□□□ -0.8
VRK3-216ENST00000599342 RETSATQ6NUM9 610 aa10.03□□□□□ -0.8
VRK3-216ENST00000599342 C22orf39Q6P5X5 142 aa10.03□□□□□ -0.8
VRK3-216ENST00000599342 LINGO4Q6UY18 593 aa10.03□□□□□ -0.8
VRK3-216ENST00000599342 ZNF783Q6ZMS7 281 aa10.03□□□□□ -0.8
VRK3-216ENST00000599342 ARCQ7LC44 396 aa10.03□□□□□ -0.8
VRK3-216ENST00000599342 IQCHQ86VS3 1027 aa10.03□□□□□ -0.8
VRK3-216ENST00000599342 ZNF683Q8IZ20 524 aa10.03□□□□□ -0.8
VRK3-216ENST00000599342 ANKRD20A12PQ8NF67 263 aa10.03□□□□□ -0.8
VRK3-216ENST00000599342 OR2A12Q8NGT7 310 aa10.03□□□□□ -0.8
VRK3-216ENST00000599342 ENOX1Q8TC92 643 aaKnown RBP10.03□□□□□ -0.8
VRK3-216ENST00000599342 GRIN3AQ8TCU5 1115 aa10.03□□□□□ -0.8
VRK3-216ENST00000599342 PPP1R16AQ96I34 528 aa10.03□□□□□ -0.8
VRK3-216ENST00000599342 CNDP2Q96KP4 475 aaKnown RBP10.03□□□□□ -0.8
VRK3-216ENST00000599342 PCMTD1Q96MG8 357 aaPredicted RBP10.03□□□□□ -0.8
VRK3-216ENST00000599342 SPON2Q9BUD6 331 aa10.03□□□□□ -0.8
VRK3-216ENST00000599342 ZYG11BQ9C0D3 744 aa10.03□□□□□ -0.8
VRK3-216ENST00000599342 ERVMER34-1Q9H9K5 563 aa10.03□□□□□ -0.8
VRK3-216ENST00000599342 ATP13A1Q9HD20 1204 aa10.03□□□□□ -0.8
VRK3-216ENST00000599342 TMPRSS4Q9NRS4 437 aa10.03□□□□□ -0.8
VRK3-216ENST00000599342 FAM207AQ9NSI2 230 aaPredicted RBP10.03□□□□□ -0.8
VRK3-216ENST00000599342 ARHGAP20Q9P2F6 1191 aa10.03□□□□□ -0.8
VRK3-216ENST00000599342 IL36AQ9UHA7 158 aa10.03□□□□□ -0.8
VRK3-216ENST00000599342 TMEM59LQ9UK28 342 aa10.03□□□□□ -0.8
VRK3-216ENST00000599342 RALYQ9UKM9 306 aaKnown RBP10.03□□□□□ -0.8
VRK3-216ENST00000599342 DAAM1Q9Y4D1 1078 aa10.03□□□□□ -0.8
VRK3-216ENST00000599342 FRYQ5TBA9 3013 aa10.03□□□□□ -0.8
VRK3-216ENST00000599342 SPEGQ15772 3267 aa10.02□□□□□ -0.8
VRK3-216ENST00000599342 ASPMQ8IZT6 3477 aa10.02□□□□□ -0.8
VRK3-216ENST00000599342 ILVBLA1L0T0 632 aa10.02□□□□□ -0.81
VRK3-216ENST00000599342 K7ERQ8 282 aa10.02□□□□□ -0.81
VRK3-216ENST00000599342 RNGTTO60942 597 aaKnown RBP10.02□□□□□ -0.81
VRK3-216ENST00000599342 CTSLP07711 333 aa10.02□□□□□ -0.81
VRK3-216ENST00000599342 SDC4P31431 198 aa10.02□□□□□ -0.81
VRK3-216ENST00000599342 SOX5P35711 763 aa10.02□□□□□ -0.81
VRK3-216ENST00000599342 ETFBP38117 255 aa10.02□□□□□ -0.81
VRK3-216ENST00000599342 CDR2Q01850 454 aa10.02□□□□□ -0.81
VRK3-216ENST00000599342 KRT31Q15323 416 aa10.02□□□□□ -0.81
VRK3-216ENST00000599342 SYCP1Q15431 976 aa10.02□□□□□ -0.81
VRK3-216ENST00000599342 PIP5KL1Q5T9C9 394 aa10.02□□□□□ -0.81
VRK3-216ENST00000599342 NEK5Q6P3R8 708 aa10.02□□□□□ -0.81
VRK3-216ENST00000599342 DHRS13Q6UX07 377 aa10.02□□□□□ -0.81
VRK3-216ENST00000599342 TRIM72Q6ZMU5 477 aa10.02□□□□□ -0.81
VRK3-216ENST00000599342 DRC7Q8IY82 874 aa10.02□□□□□ -0.81
VRK3-216ENST00000599342 EID2Q8N6I1 236 aa10.02□□□□□ -0.81
VRK3-216ENST00000599342 EMC1Q8N766 993 aa10.02□□□□□ -0.81
VRK3-216ENST00000599342 TMIEQ8NEW7 156 aa10.02□□□□□ -0.81
VRK3-216ENST00000599342 OR7D4Q8NG98 312 aa10.02□□□□□ -0.81
VRK3-216ENST00000599342 MDM1Q8TC05 714 aa10.02□□□□□ -0.81
VRK3-216ENST00000599342 SAP25Q8TEE9 199 aa10.02□□□□□ -0.81
VRK3-216ENST00000599342 SLC20A1Q8WUM9 679 aa10.02□□□□□ -0.81
VRK3-216ENST00000599342 C11orf70Q9BRQ4 267 aa10.02□□□□□ -0.81
VRK3-216ENST00000599342 GANQ9H2C0 597 aa10.02□□□□□ -0.81
VRK3-216ENST00000599342 TNKS2Q9H2K2 1166 aa10.02□□□□□ -0.81
VRK3-216ENST00000599342 NLRC4Q9NPP4 1024 aa10.02□□□□□ -0.81
VRK3-216ENST00000599342 PPARGC1AQ9UBK2 798 aaKnown RBP10.02□□□□□ -0.81
VRK3-216ENST00000599342 PCDHGA1Q9Y5H4 931 aa10.02□□□□□ -0.81
VRK3-216ENST00000599342 CHD8Q9HCK8 2581 aa10.02□□□□□ -0.81
VRK3-216ENST00000599342 A0A1W2PQU0 124 aa10.01□□□□□ -0.81
VRK3-216ENST00000599342 FAM149AA5PLN7 773 aa10.01□□□□□ -0.81
VRK3-216ENST00000599342 SLC31A1O15431 190 aa10.01□□□□□ -0.81
VRK3-216ENST00000599342 SMAD6O43541 496 aaKnown RBP10.01□□□□□ -0.81
VRK3-216ENST00000599342 RFPL3O75679 317 aa10.01□□□□□ -0.81
VRK3-216ENST00000599342 ENDOD1O94919 500 aa10.01□□□□□ -0.81
VRK3-216ENST00000599342 PCDH8O95206 1070 aa10.01□□□□□ -0.81
VRK3-216ENST00000599342 CYP1A1P04798 512 aaPredicted RBP10.01□□□□□ -0.81
VRK3-216ENST00000599342 CDK4P11802 303 aa10.01□□□□□ -0.81
VRK3-216ENST00000599342 PRLRP16471 622 aa10.01□□□□□ -0.81
VRK3-216ENST00000599342 MMP8P22894 467 aa10.01□□□□□ -0.81
VRK3-216ENST00000599342 GLDCP23378 1020 aa10.01□□□□□ -0.81
VRK3-216ENST00000599342 AKT2P31751 481 aa10.01□□□□□ -0.81
VRK3-216ENST00000599342 HNF1BP35680 557 aa10.01□□□□□ -0.81
VRK3-216ENST00000599342 STAT1P42224 750 aa10.01□□□□□ -0.81
VRK3-216ENST00000599342 NSFP46459 744 aaKnown RBP10.01□□□□□ -0.81
VRK3-216ENST00000599342 RXRGP48443 463 aa10.01□□□□□ -0.81
VRK3-216ENST00000599342 KLK7P49862 253 aa10.01□□□□□ -0.81
VRK3-216ENST00000599342 SERPINH1P50454 418 aaKnown RBP10.01□□□□□ -0.81
VRK3-216ENST00000599342 DNA2P51530 1060 aa10.01□□□□□ -0.81
VRK3-216ENST00000599342 TAS2R38P59533 333 aa10.01□□□□□ -0.81
VRK3-216ENST00000599342 FMO1Q01740 532 aa10.01□□□□□ -0.81
VRK3-216ENST00000599342 GNA12Q03113 381 aa10.01□□□□□ -0.81
VRK3-216ENST00000599342 SLC20A2Q08357 652 aa10.01□□□□□ -0.81
VRK3-216ENST00000599342 SHBQ15464 509 aa10.01□□□□□ -0.81
VRK3-216ENST00000599342 SMAD1Q15797 465 aaKnown RBP10.01□□□□□ -0.81
VRK3-216ENST00000599342 HS1BP3Q53T59 392 aa10.01□□□□□ -0.81
VRK3-216ENST00000599342 ARSIQ5FYB1 569 aa10.01□□□□□ -0.81
VRK3-216ENST00000599342 CDKAL1Q5VV42 579 aa10.01□□□□□ -0.81
VRK3-216ENST00000599342 TRNP1Q6NT89 227 aa10.01□□□□□ -0.81
VRK3-216ENST00000599342 RWDD4Q6NW29 188 aaKnown RBP10.01□□□□□ -0.81
VRK3-216ENST00000599342 SASS6Q6UVJ0 657 aa10.01□□□□□ -0.81
VRK3-216ENST00000599342 ERN2Q76MJ5 926 aaKnown RBP10.01□□□□□ -0.81
VRK3-216ENST00000599342 BNIPLQ7Z465 357 aa10.01□□□□□ -0.81
VRK3-216ENST00000599342 HORMAD1Q86X24 394 aa10.01□□□□□ -0.81
VRK3-216ENST00000599342 SPATS2Q86XZ4 545 aaKnown RBP10.01□□□□□ -0.81
VRK3-216ENST00000599342 PCDH20Q8N6Y1 951 aaKnown RBP10.01□□□□□ -0.81
VRK3-216ENST00000599342 CHST14Q8NCH0 376 aa10.01□□□□□ -0.81
VRK3-216ENST00000599342 NEK11Q8NG66 645 aa10.01□□□□□ -0.81
VRK3-216ENST00000599342 RXFP2Q8WXD0 754 aa10.01□□□□□ -0.81
VRK3-216ENST00000599342 ARRDC3Q96B67 414 aa10.01□□□□□ -0.81
VRK3-216ENST00000599342 KLHDC7BQ96G42 594 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms