RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 ARSAP15289 507 aa15.76■□□□□ 0.11
UPF1-206ENST00000598471 BASP1P80723 227 aaKnown RBP15.76■□□□□ 0.11
UPF1-206ENST00000598471 LMAN2Q12907 356 aa15.76■□□□□ 0.11
UPF1-206ENST00000598471 ZBTB17Q13105 803 aa15.76■□□□□ 0.11
UPF1-206ENST00000598471 DMC1Q14565 340 aa15.76■□□□□ 0.11
UPF1-206ENST00000598471 ZNF235Q14590 738 aa15.76■□□□□ 0.11
UPF1-206ENST00000598471 RFTN1Q14699 578 aaPredicted RBP15.76■□□□□ 0.11
UPF1-206ENST00000598471 BRD3Q15059 726 aa15.76■□□□□ 0.11
UPF1-206ENST00000598471 PARP6Q2NL67 630 aa15.76■□□□□ 0.11
UPF1-206ENST00000598471 FSCBQ5H9T9 825 aa15.76■□□□□ 0.11
UPF1-206ENST00000598471 MARC1Q5VT66 337 aa15.76■□□□□ 0.11
UPF1-206ENST00000598471 TRIM68Q6AZZ1 485 aa15.76■□□□□ 0.11
UPF1-206ENST00000598471 PARM1Q6UWI2 310 aa15.76■□□□□ 0.11
UPF1-206ENST00000598471 PRUNE1Q86TP1 453 aa15.76■□□□□ 0.11
UPF1-206ENST00000598471 ZNF567Q8N184 647 aa15.76■□□□□ 0.11
UPF1-206ENST00000598471 PLCD3Q8N3E9 789 aa15.76■□□□□ 0.11
UPF1-206ENST00000598471 OR52K2Q8NGK3 314 aa15.76■□□□□ 0.11
UPF1-206ENST00000598471 WFDC5Q8TCV5 224 aa15.76■□□□□ 0.11
UPF1-206ENST00000598471 ACDQ96AP0 544 aa15.76■□□□□ 0.11
UPF1-206ENST00000598471 ASIC4Q96FT7 647 aa15.76■□□□□ 0.11
UPF1-206ENST00000598471 TEKT5Q96M29 485 aa15.76■□□□□ 0.11
UPF1-206ENST00000598471 TRMT61BQ9BVS5 477 aaKnown RBP15.76■□□□□ 0.11
UPF1-206ENST00000598471 EBF3Q9H4W6 596 aa15.76■□□□□ 0.11
UPF1-206ENST00000598471 GOLGA6AQ9NYA3 693 aa15.76■□□□□ 0.11
UPF1-206ENST00000598471 THEGQ9P2T0 379 aa15.76■□□□□ 0.11
UPF1-206ENST00000598471 RSPH14Q9UHP6 348 aa15.76■□□□□ 0.11
UPF1-206ENST00000598471 ANAPC5Q9UJX4 755 aa15.76■□□□□ 0.11
UPF1-206ENST00000598471 REV3LO60673 3130 aa15.75■□□□□ 0.11
UPF1-206ENST00000598471 E7EVH7 732 aa15.75■□□□□ 0.11
UPF1-206ENST00000598471 CACNG3O60359 315 aa15.75■□□□□ 0.11
UPF1-206ENST00000598471 PABPC1P11940 636 aaKnown RBP15.75■□□□□ 0.11
UPF1-206ENST00000598471 MZF1P28698 734 aaPredicted RBP15.75■□□□□ 0.11
UPF1-206ENST00000598471 GDI1P31150 447 aa15.75■□□□□ 0.11
UPF1-206ENST00000598471 MMP13P45452 471 aa15.75■□□□□ 0.11
UPF1-206ENST00000598471 CARSP49589 748 aaKnown RBP15.75■□□□□ 0.11
UPF1-206ENST00000598471 PLK1P53350 603 aa15.75■□□□□ 0.11
UPF1-206ENST00000598471 NRLP54845 237 aa15.75■□□□□ 0.11
UPF1-206ENST00000598471 PLTPP55058 493 aa15.75■□□□□ 0.11
UPF1-206ENST00000598471 HTR4Q13639 388 aa15.75■□□□□ 0.11
UPF1-206ENST00000598471 GRM2Q14416 872 aa15.75■□□□□ 0.11
UPF1-206ENST00000598471 PRPSAP1Q14558 356 aa15.75■□□□□ 0.11
UPF1-206ENST00000598471 LBRQ14739 615 aaKnown RBP15.75■□□□□ 0.11
UPF1-206ENST00000598471 MORF4L2Q15014 288 aa15.75■□□□□ 0.11
UPF1-206ENST00000598471 PLEKHG6Q3KR16 790 aa15.75■□□□□ 0.11
UPF1-206ENST00000598471 PUS10Q3MIT2 529 aaKnown RBP15.75■□□□□ 0.11
UPF1-206ENST00000598471 LEXMQ3ZCV2 418 aa15.75■□□□□ 0.11
UPF1-206ENST00000598471 RETSATQ6NUM9 610 aa15.75■□□□□ 0.11
UPF1-206ENST00000598471 CCNI2Q6ZMN8 369 aaPredicted RBP15.75■□□□□ 0.11
UPF1-206ENST00000598471 CEP128Q6ZU80 1094 aa15.75■□□□□ 0.11
UPF1-206ENST00000598471 METTL3Q86U44 580 aaKnown RBP15.75■□□□□ 0.11
UPF1-206ENST00000598471 HOOK3Q86VS8 718 aa15.75■□□□□ 0.11
UPF1-206ENST00000598471 PPIL6Q8IXY8 311 aa15.75■□□□□ 0.11
UPF1-206ENST00000598471 WFIKKN2Q8TEU8 576 aa15.75■□□□□ 0.11
UPF1-206ENST00000598471 USP33Q8TEY7 942 aa15.75■□□□□ 0.11
UPF1-206ENST00000598471 FGF14Q92915 247 aa15.75■□□□□ 0.11
UPF1-206ENST00000598471 EXOC4Q96A65 974 aa15.75■□□□□ 0.11
UPF1-206ENST00000598471 ZFYVE19Q96K21 471 aa15.75■□□□□ 0.11
UPF1-206ENST00000598471 AGAP3Q96P47 875 aa15.75■□□□□ 0.11
UPF1-206ENST00000598471 PHF7Q9BWX1 381 aaPredicted RBP15.75■□□□□ 0.11
UPF1-206ENST00000598471 CEP41Q9BYV8 373 aa15.75■□□□□ 0.11
UPF1-206ENST00000598471 GBA3Q9H227 469 aa15.75■□□□□ 0.11
UPF1-206ENST00000598471 ECT2Q9H8V3 914 aa15.75■□□□□ 0.11
UPF1-206ENST00000598471 PDFQ9HBH1 243 aa15.75■□□□□ 0.11
UPF1-206ENST00000598471 ABCB8Q9NUT2 735 aa15.75■□□□□ 0.11
UPF1-206ENST00000598471 RBM22Q9NW64 420 aaKnown RBP eCLIP15.75■□□□□ 0.11
UPF1-206ENST00000598471 GRHL1Q9NZI5 618 aa15.75■□□□□ 0.11
UPF1-206ENST00000598471 IGSF9Q9P2J2 1179 aa15.75■□□□□ 0.11
UPF1-206ENST00000598471 GGA2Q9UJY4 613 aa15.75■□□□□ 0.11
UPF1-206ENST00000598471 SHOC2Q9UQ13 582 aa15.75■□□□□ 0.11
UPF1-206ENST00000598471 OR51B4Q9Y5P0 310 aa15.75■□□□□ 0.11
UPF1-206ENST00000598471 NUMBLQ9Y6R0 609 aa15.75■□□□□ 0.11
UPF1-206ENST00000598471 CXorf51AA0A1B0GTR3 108 aa15.74■□□□□ 0.11
UPF1-206ENST00000598471 CCDC151A5D8V7 595 aa15.74■□□□□ 0.11
UPF1-206ENST00000598471 ANHXE9PGG2 379 aa15.74■□□□□ 0.11
UPF1-206ENST00000598471 DYNC1I1O14576 645 aa15.74■□□□□ 0.11
UPF1-206ENST00000598471 SP100P23497 879 aaPredicted RBP15.74■□□□□ 0.11
UPF1-206ENST00000598471 IVDP26440 423 aa15.74■□□□□ 0.11
UPF1-206ENST00000598471 CD70P32970 193 aa15.74■□□□□ 0.11
UPF1-206ENST00000598471 HSPA9P38646 679 aaKnown RBP15.74■□□□□ 0.11
UPF1-206ENST00000598471 LMAN1P49257 510 aa15.74■□□□□ 0.11
UPF1-206ENST00000598471 DGKGP49619 791 aa15.74■□□□□ 0.11
UPF1-206ENST00000598471 ITGA8P53708 1063 aa15.74■□□□□ 0.11
UPF1-206ENST00000598471 SULT2A1Q06520 285 aa15.74■□□□□ 0.11
UPF1-206ENST00000598471 RUNX3Q13761 415 aa15.74■□□□□ 0.11
UPF1-206ENST00000598471 PITRM1Q5JRX3 1037 aa15.74■□□□□ 0.11
UPF1-206ENST00000598471 PPP1R21Q6ZMI0 780 aa15.74■□□□□ 0.11
UPF1-206ENST00000598471 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.74■□□□□ 0.11
UPF1-206ENST00000598471 AHI1Q8N157 1196 aa15.74■□□□□ 0.11
UPF1-206ENST00000598471 TEX26Q8N6G2 289 aa15.74■□□□□ 0.11
UPF1-206ENST00000598471 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.74■□□□□ 0.11
UPF1-206ENST00000598471 ATXN2LQ8WWM7 1075 aaKnown RBP15.74■□□□□ 0.11
UPF1-206ENST00000598471 ART4Q93070 314 aa15.74■□□□□ 0.11
UPF1-206ENST00000598471 NXPE3Q969Y0 559 aa15.74■□□□□ 0.11
UPF1-206ENST00000598471 ASB2Q96Q27 587 aa15.74■□□□□ 0.11
UPF1-206ENST00000598471 CINPQ9BW66 212 aaPredicted RBP15.74■□□□□ 0.11
UPF1-206ENST00000598471 PLA2G2FQ9BZM2 168 aa15.74■□□□□ 0.11
UPF1-206ENST00000598471 FOXP3Q9BZS1 431 aa15.74■□□□□ 0.11
UPF1-206ENST00000598471 TSPYL1Q9H0U9 437 aa15.74■□□□□ 0.11
UPF1-206ENST00000598471 DNAJC17Q9NVM6 304 aaKnown RBP15.74■□□□□ 0.11
UPF1-206ENST00000598471 SEPT3Q9UH03 358 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms