RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 ZWILCHQ9H900 591 aa14.16□□□□□ -0.14
UPF1-205ENST00000598209 VPS45Q9NRW7 570 aa14.16□□□□□ -0.14
UPF1-205ENST00000598209 HPCAL4Q9UM19 191 aa14.16□□□□□ -0.14
UPF1-205ENST00000598209 ATXN2Q99700 1313 aaKnown RBP14.15□□□□□ -0.14
UPF1-205ENST00000598209 ADAMTS9Q9P2N4 1935 aa14.15□□□□□ -0.14
UPF1-205ENST00000598209 ZNF292O60281 2723 aa14.15□□□□□ -0.14
UPF1-205ENST00000598209 MCF2LO15068 1137 aa14.15□□□□□ -0.14
UPF1-205ENST00000598209 DAPK3O43293 454 aa14.15□□□□□ -0.14
UPF1-205ENST00000598209 ADH1BP00325 375 aa14.15□□□□□ -0.14
UPF1-205ENST00000598209 IL1BP01584 269 aa14.15□□□□□ -0.14
UPF1-205ENST00000598209 GOT1P17174 413 aa14.15□□□□□ -0.14
UPF1-205ENST00000598209 C5AR1P21730 350 aa14.15□□□□□ -0.14
UPF1-205ENST00000598209 ITPKAP23677 461 aa14.15□□□□□ -0.14
UPF1-205ENST00000598209 SLC8A1P32418 973 aa14.15□□□□□ -0.14
UPF1-205ENST00000598209 ACSL1P33121 698 aa14.15□□□□□ -0.14
UPF1-205ENST00000598209 SERPINH1P50454 418 aaKnown RBP14.15□□□□□ -0.14
UPF1-205ENST00000598209 YBEYP58557 167 aaPredicted RBP14.15□□□□□ -0.14
UPF1-205ENST00000598209 SF3A2Q15428 464 aaKnown RBP14.15□□□□□ -0.14
UPF1-205ENST00000598209 BOLA3Q53S33 107 aa14.15□□□□□ -0.14
UPF1-205ENST00000598209 KCNT1Q5JUK3 1230 aa14.15□□□□□ -0.14
UPF1-205ENST00000598209 C22orf39Q6P5X5 142 aa14.15□□□□□ -0.14
UPF1-205ENST00000598209 RFX8Q6ZV50 586 aa14.15□□□□□ -0.14
UPF1-205ENST00000598209 USP30Q70CQ3 517 aa14.15□□□□□ -0.14
UPF1-205ENST00000598209 DSG4Q86SJ6 1040 aa14.15□□□□□ -0.14
UPF1-205ENST00000598209 ZNF354CQ86Y25 554 aa14.15□□□□□ -0.14
UPF1-205ENST00000598209 HSPH1Q92598 858 aa14.15□□□□□ -0.14
UPF1-205ENST00000598209 ZNF419Q96HQ0 510 aaPredicted RBP14.15□□□□□ -0.14
UPF1-205ENST00000598209 FBXL12Q9NXK8 326 aa14.15□□□□□ -0.14
UPF1-205ENST00000598209 DONSONQ9NYP3 566 aa14.15□□□□□ -0.14
UPF1-205ENST00000598209 NCKAP1Q9Y2A7 1128 aa14.15□□□□□ -0.14
UPF1-205ENST00000598209 ACTL7AQ9Y615 435 aa14.15□□□□□ -0.14
UPF1-205ENST00000598209 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.15□□□□□ -0.14
UPF1-205ENST00000598209 CXorf51AA0A1B0GTR3 108 aa14.14□□□□□ -0.15
UPF1-205ENST00000598209 A0A1W2PP55 124 aa14.14□□□□□ -0.15
UPF1-205ENST00000598209 RASA4BC9J798 803 aa14.14□□□□□ -0.15
UPF1-205ENST00000598209 ALOX15BO15296 676 aa14.14□□□□□ -0.15
UPF1-205ENST00000598209 RASA4O43374 803 aa14.14□□□□□ -0.15
UPF1-205ENST00000598209 KDELR3O43731 214 aa14.14□□□□□ -0.15
UPF1-205ENST00000598209 PROSCO94903 275 aa14.14□□□□□ -0.15
UPF1-205ENST00000598209 CD160O95971 181 aa14.14□□□□□ -0.15
UPF1-205ENST00000598209 RARAP10276 462 aa14.14□□□□□ -0.15
UPF1-205ENST00000598209 DPP6P42658 865 aa14.14□□□□□ -0.15
UPF1-205ENST00000598209 SSR1P43307 286 aaKnown RBP14.14□□□□□ -0.15
UPF1-205ENST00000598209 ZNF135P52742 658 aaPredicted RBP14.14□□□□□ -0.15
UPF1-205ENST00000598209 GEMIN4P57678 1058 aaKnown RBP14.14□□□□□ -0.15
UPF1-205ENST00000598209 SLC25A11Q02978 314 aaKnown RBP14.14□□□□□ -0.15
UPF1-205ENST00000598209 LMNB2Q03252 620 aa14.14□□□□□ -0.15
UPF1-205ENST00000598209 SFSWAPQ12872 951 aaKnown RBP14.14□□□□□ -0.15
UPF1-205ENST00000598209 DPYSL2Q16555 572 aa14.14□□□□□ -0.15
UPF1-205ENST00000598209 TXNRD3NBQ6F5E7 133 aa14.14□□□□□ -0.15
UPF1-205ENST00000598209 SYT12Q8IV01 421 aa14.14□□□□□ -0.15
UPF1-205ENST00000598209 UMODL1-AS1Q8N2C9 162 aa14.14□□□□□ -0.15
UPF1-205ENST00000598209 C12orf50Q8NA57 414 aaPredicted RBP14.14□□□□□ -0.15
UPF1-205ENST00000598209 CADM4Q8NFZ8 388 aa14.14□□□□□ -0.15
UPF1-205ENST00000598209 OR2A12Q8NGT7 310 aa14.14□□□□□ -0.15
UPF1-205ENST00000598209 TEKT4Q8WW24 435 aa14.14□□□□□ -0.15
UPF1-205ENST00000598209 FOXJ1Q92949 421 aa14.14□□□□□ -0.15
UPF1-205ENST00000598209 HMCESQ96FZ2 354 aa14.14□□□□□ -0.15
UPF1-205ENST00000598209 CCDC114Q96M63 670 aa14.14□□□□□ -0.15
UPF1-205ENST00000598209 OMDQ99983 421 aa14.14□□□□□ -0.15
UPF1-205ENST00000598209 CEP44Q9C0F1 390 aa14.14□□□□□ -0.15
UPF1-205ENST00000598209 BTBD1Q9H0C5 482 aa14.14□□□□□ -0.15
UPF1-205ENST00000598209 TNKS2Q9H2K2 1166 aa14.14□□□□□ -0.15
UPF1-205ENST00000598209 SGK2Q9HBY8 427 aa14.14□□□□□ -0.15
UPF1-205ENST00000598209 OSGEPQ9NPF4 335 aa14.14□□□□□ -0.15
UPF1-205ENST00000598209 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.14□□□□□ -0.15
UPF1-205ENST00000598209 TMEM74BQ9NUR3 256 aa14.14□□□□□ -0.15
UPF1-205ENST00000598209 CWC15Q9P013 229 aaKnown RBP14.14□□□□□ -0.15
UPF1-205ENST00000598209 SERGEFQ9UGK8 458 aa14.14□□□□□ -0.15
UPF1-205ENST00000598209 PILRBQ9UKJ0 227 aa14.14□□□□□ -0.15
UPF1-205ENST00000598209 SARDHQ9UL12 918 aa14.14□□□□□ -0.15
UPF1-205ENST00000598209 FCF1Q9Y324 198 aaKnown RBP14.14□□□□□ -0.15
UPF1-205ENST00000598209 FARP1Q9Y4F1 1045 aaPredicted RBP14.14□□□□□ -0.15
UPF1-205ENST00000598209 SHROOM3Q8TF72 1996 aa14.14□□□□□ -0.15
UPF1-205ENST00000598209 CFAP54Q96N23 3096 aa14.13□□□□□ -0.15
UPF1-205ENST00000598209 METTL12A8MUP2 240 aa14.13□□□□□ -0.15
UPF1-205ENST00000598209 MEI4A8MW99 385 aa14.13□□□□□ -0.15
UPF1-205ENST00000598209 PATE3B3GLJ2 98 aa14.13□□□□□ -0.15
UPF1-205ENST00000598209 C1QTNF3-AMACRE9PGA6 284 aa14.13□□□□□ -0.15
UPF1-205ENST00000598209 H3BRJ5 948 aa14.13□□□□□ -0.15
UPF1-205ENST00000598209 FOXD2O60548 495 aaPredicted RBP14.13□□□□□ -0.15
UPF1-205ENST00000598209 ZNF821O75541 412 aaPredicted RBP14.13□□□□□ -0.15
UPF1-205ENST00000598209 RNASEH2AO75792 299 aaKnown RBP14.13□□□□□ -0.15
UPF1-205ENST00000598209 SEMA4FO95754 770 aa14.13□□□□□ -0.15
UPF1-205ENST00000598209 ERCC2P18074 760 aa14.13□□□□□ -0.15
UPF1-205ENST00000598209 ARL4AP40617 200 aa14.13□□□□□ -0.15
UPF1-205ENST00000598209 RECQLP46063 649 aaPredicted RBP14.13□□□□□ -0.15
UPF1-205ENST00000598209 HCAR3P49019 387 aa14.13□□□□□ -0.15
UPF1-205ENST00000598209 NDST2P52849 883 aa14.13□□□□□ -0.15
UPF1-205ENST00000598209 METAP1P53582 386 aa14.13□□□□□ -0.15
UPF1-205ENST00000598209 SERINC3Q13530 473 aa14.13□□□□□ -0.15
UPF1-205ENST00000598209 HADHQ16836 314 aaKnown RBP14.13□□□□□ -0.15
UPF1-205ENST00000598209 PARP15Q460N3 678 aa14.13□□□□□ -0.15
UPF1-205ENST00000598209 AASDHQ4L235 1098 aaPredicted RBP14.13□□□□□ -0.15
UPF1-205ENST00000598209 SYCP2LQ5T4T6 812 aa14.13□□□□□ -0.15
UPF1-205ENST00000598209 DCAF12L1Q5VU92 463 aa14.13□□□□□ -0.15
UPF1-205ENST00000598209 FAM46CQ5VWP2 391 aa14.13□□□□□ -0.15
UPF1-205ENST00000598209 PEAR1Q5VY43 1037 aaPredicted RBP14.13□□□□□ -0.15
UPF1-205ENST00000598209 TCEAL6Q6IPX3 200 aa14.13□□□□□ -0.15
UPF1-205ENST00000598209 LEKR1Q6ZMV7 388 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms