RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 SLC31A1O15431 190 aa12.4□□□□□ -0.42
SOX2-OT-228ENST00000597828 YKT6O15498 198 aa12.4□□□□□ -0.42
SOX2-OT-228ENST00000597828 SLC7A4O43246 635 aa12.4□□□□□ -0.42
SOX2-OT-228ENST00000597828 TLX3O43711 291 aaPredicted RBP12.4□□□□□ -0.42
SOX2-OT-228ENST00000597828 RNGTTO60942 597 aaKnown RBP12.4□□□□□ -0.42
SOX2-OT-228ENST00000597828 KRT9P35527 623 aa12.4□□□□□ -0.42
SOX2-OT-228ENST00000597828 RXRGP48443 463 aa12.4□□□□□ -0.42
SOX2-OT-228ENST00000597828 VASPP50552 380 aaPredicted RBP12.4□□□□□ -0.42
SOX2-OT-228ENST00000597828 CDH4P55283 916 aa12.4□□□□□ -0.42
SOX2-OT-228ENST00000597828 TARDBPQ13148 414 aaKnown RBP eCLIP12.4□□□□□ -0.42
SOX2-OT-228ENST00000597828 ACAP1Q15027 740 aa12.4□□□□□ -0.42
SOX2-OT-228ENST00000597828 MIIPQ5JXC2 388 aa12.4□□□□□ -0.42
SOX2-OT-228ENST00000597828 TAF3Q5VWG9 929 aa12.4□□□□□ -0.42
SOX2-OT-228ENST00000597828 FAM46CQ5VWP2 391 aa12.4□□□□□ -0.42
SOX2-OT-228ENST00000597828 FBXL19Q6PCT2 694 aa12.4□□□□□ -0.42
SOX2-OT-228ENST00000597828 TMPRSS12Q86WS5 348 aa12.4□□□□□ -0.42
SOX2-OT-228ENST00000597828 ATP11CQ8NB49 1132 aa12.4□□□□□ -0.42
SOX2-OT-228ENST00000597828 ZNF397Q8NF99 534 aaPredicted RBP12.4□□□□□ -0.42
SOX2-OT-228ENST00000597828 OR7D4Q8NG98 312 aa12.4□□□□□ -0.42
SOX2-OT-228ENST00000597828 GRIN3AQ8TCU5 1115 aa12.4□□□□□ -0.42
SOX2-OT-228ENST00000597828 FAM81BQ96LP2 452 aa12.4□□□□□ -0.42
SOX2-OT-228ENST00000597828 NOX5Q96PH1 765 aa12.4□□□□□ -0.42
SOX2-OT-228ENST00000597828 TNKS2Q9H2K2 1166 aa12.4□□□□□ -0.42
SOX2-OT-228ENST00000597828 ERVMER34-1Q9H9K5 563 aa12.4□□□□□ -0.42
SOX2-OT-228ENST00000597828 SCUBE2Q9NQ36 999 aa12.4□□□□□ -0.42
SOX2-OT-228ENST00000597828 HS3ST2Q9Y278 367 aa12.4□□□□□ -0.42
SOX2-OT-228ENST00000597828 FHOD1Q9Y613 1164 aa12.4□□□□□ -0.42
SOX2-OT-228ENST00000597828 ACTL7AQ9Y615 435 aa12.4□□□□□ -0.42
SOX2-OT-228ENST00000597828 ARHGEF17Q96PE2 2063 aaPredicted RBP12.39□□□□□ -0.43
SOX2-OT-228ENST00000597828 A0A1W2PQU0 124 aa12.39□□□□□ -0.43
SOX2-OT-228ENST00000597828 GOLGA8SH3BPF8 625 aa12.39□□□□□ -0.43
SOX2-OT-228ENST00000597828 TRIM38O00635 465 aa12.39□□□□□ -0.43
SOX2-OT-228ENST00000597828 CLDN11O75508 207 aa12.39□□□□□ -0.43
SOX2-OT-228ENST00000597828 ENDOD1O94919 500 aa12.39□□□□□ -0.43
SOX2-OT-228ENST00000597828 JUPP14923 745 aa12.39□□□□□ -0.43
SOX2-OT-228ENST00000597828 ITPKBP27987 946 aa12.39□□□□□ -0.43
SOX2-OT-228ENST00000597828 HNF1BP35680 557 aa12.39□□□□□ -0.43
SOX2-OT-228ENST00000597828 FLT3P36888 993 aa12.39□□□□□ -0.43
SOX2-OT-228ENST00000597828 CXCR3P49682 368 aa12.39□□□□□ -0.43
SOX2-OT-228ENST00000597828 OXCT1P55809 520 aa12.39□□□□□ -0.43
SOX2-OT-228ENST00000597828 DEUP1Q05D60 604 aa12.39□□□□□ -0.43
SOX2-OT-228ENST00000597828 KCNMA1Q12791 1236 aa12.39□□□□□ -0.43
SOX2-OT-228ENST00000597828 RAPGEF1Q13905 1077 aa12.39□□□□□ -0.43
SOX2-OT-228ENST00000597828 STAT4Q14765 748 aa12.39□□□□□ -0.43
SOX2-OT-228ENST00000597828 DRAP1Q14919 205 aaPredicted RBP12.39□□□□□ -0.43
SOX2-OT-228ENST00000597828 MAN2A1Q16706 1144 aa12.39□□□□□ -0.43
SOX2-OT-228ENST00000597828 SETMARQ53H47 684 aaPredicted RBP12.39□□□□□ -0.43
SOX2-OT-228ENST00000597828 RAB6CQ53S08 254 aa12.39□□□□□ -0.43
SOX2-OT-228ENST00000597828 FAM102AQ5T9C2 384 aaPredicted RBP12.39□□□□□ -0.43
SOX2-OT-228ENST00000597828 SEL1L3Q68CR1 1132 aa12.39□□□□□ -0.43
SOX2-OT-228ENST00000597828 C22orf39Q6P5X5 142 aa12.39□□□□□ -0.43
SOX2-OT-228ENST00000597828 XYLT1Q86Y38 959 aa12.39□□□□□ -0.43
SOX2-OT-228ENST00000597828 FAM71AQ8IYT1 594 aa12.39□□□□□ -0.43
SOX2-OT-228ENST00000597828 OXR1Q8N573 874 aa12.39□□□□□ -0.43
SOX2-OT-228ENST00000597828 TMEM145Q8NBT3 493 aa12.39□□□□□ -0.43
SOX2-OT-228ENST00000597828 OR2A12Q8NGT7 310 aa12.39□□□□□ -0.43
SOX2-OT-228ENST00000597828 NXPE2Q96DL1 559 aa12.39□□□□□ -0.43
SOX2-OT-228ENST00000597828 RAB6CQ9H0N0 254 aa12.39□□□□□ -0.43
SOX2-OT-228ENST00000597828 KDM4CQ9H3R0 1056 aa12.39□□□□□ -0.43
SOX2-OT-228ENST00000597828 WDCPQ9H6R7 721 aa12.39□□□□□ -0.43
SOX2-OT-228ENST00000597828 UCKL1Q9NWZ5 548 aa12.39□□□□□ -0.43
SOX2-OT-228ENST00000597828 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.39□□□□□ -0.43
SOX2-OT-228ENST00000597828 ZFR2Q9UPR6 939 aaKnown RBP12.39□□□□□ -0.43
SOX2-OT-228ENST00000597828 DMTF1Q9Y222 760 aa12.39□□□□□ -0.43
SOX2-OT-228ENST00000597828 A0A087WV48 116 aa12.38□□□□□ -0.43
SOX2-OT-228ENST00000597828 E9PAM4 449 aa12.38□□□□□ -0.43
SOX2-OT-228ENST00000597828 PRAMEF26H0Y7S4 382 aa12.38□□□□□ -0.43
SOX2-OT-228ENST00000597828 FFAR2O15552 330 aa12.38□□□□□ -0.43
SOX2-OT-228ENST00000597828 SIGLEC6O43699 453 aa12.38□□□□□ -0.43
SOX2-OT-228ENST00000597828 THEGLP0DJG4 465 aa12.38□□□□□ -0.43
SOX2-OT-228ENST00000597828 MYF5P13349 255 aa12.38□□□□□ -0.43
SOX2-OT-228ENST00000597828 PRKCSHP14314 528 aaPredicted RBP12.38□□□□□ -0.43
SOX2-OT-228ENST00000597828 CYP11B1P15538 503 aa12.38□□□□□ -0.43
SOX2-OT-228ENST00000597828 CHRNA3P32297 505 aa12.38□□□□□ -0.43
SOX2-OT-228ENST00000597828 CDH5P33151 784 aaPredicted RBP12.38□□□□□ -0.43
SOX2-OT-228ENST00000597828 CLDN2P57739 230 aa12.38□□□□□ -0.43
SOX2-OT-228ENST00000597828 SEMG2Q02383 582 aa12.38□□□□□ -0.43
SOX2-OT-228ENST00000597828 TPD52L1Q16890 204 aaPredicted RBP12.38□□□□□ -0.43
SOX2-OT-228ENST00000597828 PROX2Q3B8N5 592 aa12.38□□□□□ -0.43
SOX2-OT-228ENST00000597828 DPCR1Q3MIW9 517 aa12.38□□□□□ -0.43
SOX2-OT-228ENST00000597828 BRMS1LQ5PSV4 323 aa12.38□□□□□ -0.43
SOX2-OT-228ENST00000597828 C6orf118Q5T5N4 469 aa12.38□□□□□ -0.43
SOX2-OT-228ENST00000597828 KDM7AQ6ZMT4 941 aa12.38□□□□□ -0.43
SOX2-OT-228ENST00000597828 GCNT7Q6ZNI0 430 aa12.38□□□□□ -0.43
SOX2-OT-228ENST00000597828 IQCHQ86VS3 1027 aa12.38□□□□□ -0.43
SOX2-OT-228ENST00000597828 SLC22A18ASQ8N1D0 253 aa12.38□□□□□ -0.43
SOX2-OT-228ENST00000597828 DCAF4L2Q8NA75 395 aa12.38□□□□□ -0.43
SOX2-OT-228ENST00000597828 OR13H1Q8NG92 308 aa12.38□□□□□ -0.43
SOX2-OT-228ENST00000597828 NT5C3BQ969T7 300 aa12.38□□□□□ -0.43
SOX2-OT-228ENST00000597828 KLHDC7BQ96G42 594 aa12.38□□□□□ -0.43
SOX2-OT-228ENST00000597828 CFAP57Q96MR6 1250 aa12.38□□□□□ -0.43
SOX2-OT-228ENST00000597828 CALN1Q9BXU9 219 aa12.38□□□□□ -0.43
SOX2-OT-228ENST00000597828 PREBQ9HCU5 417 aa12.38□□□□□ -0.43
SOX2-OT-228ENST00000597828 ZNF212Q9UDV6 495 aa12.38□□□□□ -0.43
SOX2-OT-228ENST00000597828 TPX2Q9ULW0 747 aaKnown RBP12.38□□□□□ -0.43
SOX2-OT-228ENST00000597828 STAP1Q9ULZ2 295 aa12.38□□□□□ -0.43
SOX2-OT-228ENST00000597828 ZNF821O75541 412 aaPredicted RBP12.37□□□□□ -0.43
SOX2-OT-228ENST00000597828 MMEP08473 750 aa12.37□□□□□ -0.43
SOX2-OT-228ENST00000597828 ABCG1P45844 678 aa12.37□□□□□ -0.43
SOX2-OT-228ENST00000597828 GABRB2P47870 512 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms