RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 GOLPH3Q9H4A6 298 aa20.09■□□□□ 0.81
SHKBP1-214ENST00000597396 ALG6Q9Y672 507 aa20.09■□□□□ 0.81
SHKBP1-214ENST00000597396 DUSP10Q9Y6W6 482 aa20.09■□□□□ 0.81
SHKBP1-214ENST00000597396 ABCA7Q8IZY2 2146 aa20.09■□□□□ 0.81
SHKBP1-214ENST00000597396 CFAP54Q96N23 3096 aa20.08■□□□□ 0.81
SHKBP1-214ENST00000597396 LRRD1A4D1F6 860 aa20.08■□□□□ 0.81
SHKBP1-214ENST00000597396 ZSCAN5CA6NGD5 496 aaPredicted RBP20.08■□□□□ 0.81
SHKBP1-214ENST00000597396 KDELR3O43731 214 aa20.08■□□□□ 0.81
SHKBP1-214ENST00000597396 BNIP3LO60238 219 aa20.08■□□□□ 0.81
SHKBP1-214ENST00000597396 RNASEH1O60930 286 aaKnown RBP20.08■□□□□ 0.81
SHKBP1-214ENST00000597396 CD48P09326 243 aa20.08■□□□□ 0.81
SHKBP1-214ENST00000597396 SERPINH1P50454 418 aaKnown RBP20.08■□□□□ 0.81
SHKBP1-214ENST00000597396 ARSEP51690 589 aa20.08■□□□□ 0.81
SHKBP1-214ENST00000597396 CLCN6P51797 869 aa20.08■□□□□ 0.81
SHKBP1-214ENST00000597396 COPAP53621 1224 aa20.08■□□□□ 0.81
SHKBP1-214ENST00000597396 BYSLQ13895 437 aaKnown RBP20.08■□□□□ 0.81
SHKBP1-214ENST00000597396 DPYSL3Q14195 570 aa20.08■□□□□ 0.81
SHKBP1-214ENST00000597396 IFI16Q16666 785 aaKnown RBP20.08■□□□□ 0.81
SHKBP1-214ENST00000597396 LRRC38Q5VT99 294 aa20.08■□□□□ 0.81
SHKBP1-214ENST00000597396 PRR23BQ6ZRT6 265 aa20.08■□□□□ 0.81
SHKBP1-214ENST00000597396 PTPRN2Q92932 1015 aa20.08■□□□□ 0.81
SHKBP1-214ENST00000597396 ZNF670Q9BS34 389 aa20.08■□□□□ 0.81
SHKBP1-214ENST00000597396 INVSQ9Y283 1065 aa20.08■□□□□ 0.81
SHKBP1-214ENST00000597396 ADGRG1Q9Y653 693 aa20.08■□□□□ 0.81
SHKBP1-214ENST00000597396 RALGAPA1Q6GYQ0 2036 aa20.08■□□□□ 0.8
SHKBP1-214ENST00000597396 MACROD2A1Z1Q3 448 aa20.07■□□□□ 0.8
SHKBP1-214ENST00000597396 K7ERQ8 282 aa20.07■□□□□ 0.8
SHKBP1-214ENST00000597396 DFFAO00273 331 aa20.07■□□□□ 0.8
SHKBP1-214ENST00000597396 DCLK1O15075 740 aa20.07■□□□□ 0.8
SHKBP1-214ENST00000597396 HRO43593 1189 aa20.07■□□□□ 0.8
SHKBP1-214ENST00000597396 LMNAP02545 664 aaKnown RBP20.07■□□□□ 0.8
SHKBP1-214ENST00000597396 KRT1P04264 644 aa20.07■□□□□ 0.8
SHKBP1-214ENST00000597396 PTMAP06454 111 aaKnown RBP20.07■□□□□ 0.8
SHKBP1-214ENST00000597396 ACADMP11310 421 aa20.07■□□□□ 0.8
SHKBP1-214ENST00000597396 VAV1P15498 845 aa20.07■□□□□ 0.8
SHKBP1-214ENST00000597396 KDELR1P24390 212 aa20.07■□□□□ 0.8
SHKBP1-214ENST00000597396 SERPINB6P35237 376 aa20.07■□□□□ 0.8
SHKBP1-214ENST00000597396 SERINC3Q13530 473 aa20.07■□□□□ 0.8
SHKBP1-214ENST00000597396 SIM2Q14190 667 aaPredicted RBP20.07■□□□□ 0.8
SHKBP1-214ENST00000597396 GSE1Q14687 1217 aa20.07■□□□□ 0.8
SHKBP1-214ENST00000597396 C9orf64Q5T6V5 341 aa20.07■□□□□ 0.8
SHKBP1-214ENST00000597396 ZNF776Q68DI1 518 aaPredicted RBP20.07■□□□□ 0.8
SHKBP1-214ENST00000597396 C22orf39Q6P5X5 142 aa20.07■□□□□ 0.8
SHKBP1-214ENST00000597396 Q6ZVU0 165 aa20.07■□□□□ 0.8
SHKBP1-214ENST00000597396 STK40Q8N2I9 435 aa20.07■□□□□ 0.8
SHKBP1-214ENST00000597396 FRS2Q8WU20 508 aa20.07■□□□□ 0.8
SHKBP1-214ENST00000597396 RLN3Q8WXF3 142 aa20.07■□□□□ 0.8
SHKBP1-214ENST00000597396 CCDC114Q96M63 670 aa20.07■□□□□ 0.8
SHKBP1-214ENST00000597396 SLC39A8Q9C0K1 460 aa20.07■□□□□ 0.8
SHKBP1-214ENST00000597396 SEMA4AQ9H3S1 761 aa20.07■□□□□ 0.8
SHKBP1-214ENST00000597396 LRRC19Q9H756 370 aa20.07■□□□□ 0.8
SHKBP1-214ENST00000597396 ETNK2Q9NVF9 386 aa20.07■□□□□ 0.8
SHKBP1-214ENST00000597396 DDX56Q9NY93 547 aaKnown RBP20.07■□□□□ 0.8
SHKBP1-214ENST00000597396 RAB23Q9ULC3 237 aa20.07■□□□□ 0.8
SHKBP1-214ENST00000597396 MFHAS1Q9Y4C4 1052 aa20.07■□□□□ 0.8
SHKBP1-214ENST00000597396 SDK1Q7Z5N4 2213 aa20.06■□□□□ 0.8
SHKBP1-214ENST00000597396 CXorf51AA0A1B0GTR3 108 aa20.06■□□□□ 0.8
SHKBP1-214ENST00000597396 SMAD6O43541 496 aaKnown RBP20.06■□□□□ 0.8
SHKBP1-214ENST00000597396 PSTPIP1O43586 416 aa20.06■□□□□ 0.8
SHKBP1-214ENST00000597396 ZNF217O75362 1048 aa20.06■□□□□ 0.8
SHKBP1-214ENST00000597396 CCZ1BP86790 482 aa20.06■□□□□ 0.8
SHKBP1-214ENST00000597396 CCZ1P86791 482 aaPredicted RBP20.06■□□□□ 0.8
SHKBP1-214ENST00000597396 ANKRD20A8PQ5CZ79 823 aa20.06■□□□□ 0.8
SHKBP1-214ENST00000597396 LEKR1Q6ZMV7 388 aa20.06■□□□□ 0.8
SHKBP1-214ENST00000597396 NPWQ8N729 165 aa20.06■□□□□ 0.8
SHKBP1-214ENST00000597396 NETO2Q8NC67 525 aa20.06■□□□□ 0.8
SHKBP1-214ENST00000597396 OR8D1Q8WZ84 308 aa20.06■□□□□ 0.8
SHKBP1-214ENST00000597396 RAPGEF5Q92565 580 aa20.06■□□□□ 0.8
SHKBP1-214ENST00000597396 TSGA10Q9BZW7 698 aa20.06■□□□□ 0.8
SHKBP1-214ENST00000597396 KLC2Q9H0B6 622 aa20.06■□□□□ 0.8
SHKBP1-214ENST00000597396 RSPH9Q9H1X1 276 aaPredicted RBP20.06■□□□□ 0.8
SHKBP1-214ENST00000597396 TRIM10Q9UDY6 481 aa20.06■□□□□ 0.8
SHKBP1-214ENST00000597396 CYP8B1Q9UNU6 501 aa20.06■□□□□ 0.8
SHKBP1-214ENST00000597396 FARP1Q9Y4F1 1045 aaPredicted RBP20.06■□□□□ 0.8
SHKBP1-214ENST00000597396 ACTL7AQ9Y615 435 aa20.06■□□□□ 0.8
SHKBP1-214ENST00000597396 GVINP1Q7Z2Y8 2422 aa20.06■□□□□ 0.8
SHKBP1-214ENST00000597396 A0A0U1RQJ8 604 aa20.05■□□□□ 0.8
SHKBP1-214ENST00000597396 DNTTP04053 509 aa20.05■□□□□ 0.8
SHKBP1-214ENST00000597396 IL4RP24394 825 aa20.05■□□□□ 0.8
SHKBP1-214ENST00000597396 P2RY2P41231 377 aa20.05■□□□□ 0.8
SHKBP1-214ENST00000597396 RECQLP46063 649 aaPredicted RBP20.05■□□□□ 0.8
SHKBP1-214ENST00000597396 PAPOLAP51003 745 aaKnown RBP20.05■□□□□ 0.8
SHKBP1-214ENST00000597396 RPS14P62263 151 aaKnown RBP20.05■□□□□ 0.8
SHKBP1-214ENST00000597396 ELAVL3Q14576 367 aaKnown RBP20.05■□□□□ 0.8
SHKBP1-214ENST00000597396 TTC31Q49AM3 519 aaPredicted RBP20.05■□□□□ 0.8
SHKBP1-214ENST00000597396 DSG4Q86SJ6 1040 aa20.05■□□□□ 0.8
SHKBP1-214ENST00000597396 C11orf74Q86VG3 221 aa20.05■□□□□ 0.8
SHKBP1-214ENST00000597396 ARHGAP12Q8IWW6 846 aa20.05■□□□□ 0.8
SHKBP1-214ENST00000597396 PCDH20Q8N6Y1 951 aaKnown RBP20.05■□□□□ 0.8
SHKBP1-214ENST00000597396 KIAA1524Q8TCG1 905 aa20.05■□□□□ 0.8
SHKBP1-214ENST00000597396 CEP44Q9C0F1 390 aa20.05■□□□□ 0.8
SHKBP1-214ENST00000597396 EPC1Q9H2F5 836 aa20.05■□□□□ 0.8
SHKBP1-214ENST00000597396 SP110Q9HB58 689 aa20.05■□□□□ 0.8
SHKBP1-214ENST00000597396 FCF1Q9Y324 198 aaKnown RBP20.05■□□□□ 0.8
SHKBP1-214ENST00000597396 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.05■□□□□ 0.8
SHKBP1-214ENST00000597396 NUMA1Q14980 2115 aa20.05■□□□□ 0.8
SHKBP1-214ENST00000597396 SPTBN4Q9H254 2564 aa20.04■□□□□ 0.8
SHKBP1-214ENST00000597396 ANKRD36A6QL64 1941 aa20.04■□□□□ 0.8
SHKBP1-214ENST00000597396 MAP3K13O43283 966 aa20.04■□□□□ 0.8
SHKBP1-214ENST00000597396 KRT86O43790 486 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms