RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 AMPD1P23109 780 aa15.34■□□□□ 0.05
TRIM28-207ENST00000597136 PRKCHP24723 683 aa15.34■□□□□ 0.05
TRIM28-207ENST00000597136 STK19P49842 368 aaPredicted RBP15.34■□□□□ 0.05
TRIM28-207ENST00000597136 CCR3P51677 355 aa15.34■□□□□ 0.05
TRIM28-207ENST00000597136 KLF1Q13351 362 aaPredicted RBP15.34■□□□□ 0.05
TRIM28-207ENST00000597136 TFDP2Q14188 446 aa15.34■□□□□ 0.05
TRIM28-207ENST00000597136 EIF4HQ15056 248 aaKnown RBP15.34■□□□□ 0.05
TRIM28-207ENST00000597136 CRY1Q16526 586 aa15.34■□□□□ 0.05
TRIM28-207ENST00000597136 LONRF2Q1L5Z9 754 aa15.34■□□□□ 0.05
TRIM28-207ENST00000597136 SETD3Q86TU7 594 aaPredicted RBP15.34■□□□□ 0.05
TRIM28-207ENST00000597136 RFX6Q8HWS3 928 aa15.34■□□□□ 0.05
TRIM28-207ENST00000597136 ZNF557Q8N988 423 aaPredicted RBP15.34■□□□□ 0.05
TRIM28-207ENST00000597136 KCNV2Q8TDN2 545 aa15.34■□□□□ 0.05
TRIM28-207ENST00000597136 UCMAQ8WVF2 138 aa15.34■□□□□ 0.05
TRIM28-207ENST00000597136 HHIPQ96QV1 700 aa15.34■□□□□ 0.05
TRIM28-207ENST00000597136 NAP1L3Q99457 506 aaPredicted RBP15.34■□□□□ 0.05
TRIM28-207ENST00000597136 IER2Q9BTL4 223 aa15.34■□□□□ 0.05
TRIM28-207ENST00000597136 MUC3BQ9H195 1237 aa15.34■□□□□ 0.05
TRIM28-207ENST00000597136 PRMT8Q9NR22 394 aaPredicted RBP15.34■□□□□ 0.05
TRIM28-207ENST00000597136 ERVW-1Q9UQF0 538 aa15.34■□□□□ 0.05
TRIM28-207ENST00000597136 MFHAS1Q9Y4C4 1052 aa15.34■□□□□ 0.05
TRIM28-207ENST00000597136 A0A1W2PQF6 199 aa15.33■□□□□ 0.05
TRIM28-207ENST00000597136 CST8O60676 142 aa15.33■□□□□ 0.05
TRIM28-207ENST00000597136 SP9P0CG40 484 aa15.33■□□□□ 0.05
TRIM28-207ENST00000597136 ERCC2P18074 760 aa15.33■□□□□ 0.05
TRIM28-207ENST00000597136 ACVRL1P37023 503 aa15.33■□□□□ 0.05
TRIM28-207ENST00000597136 GNA12Q03113 381 aa15.33■□□□□ 0.05
TRIM28-207ENST00000597136 SLC12A1Q13621 1099 aa15.33■□□□□ 0.05
TRIM28-207ENST00000597136 ENPP2Q13822 863 aa15.33■□□□□ 0.05
TRIM28-207ENST00000597136 WHAMMP3Q1A5X7 153 aa15.33■□□□□ 0.05
TRIM28-207ENST00000597136 CCDC181Q5TID7 509 aa15.33■□□□□ 0.05
TRIM28-207ENST00000597136 HEATR6Q6AI08 1181 aaKnown RBP15.33■□□□□ 0.05
TRIM28-207ENST00000597136 SLC9A4Q6AI14 798 aa15.33■□□□□ 0.05
TRIM28-207ENST00000597136 BBS12Q6ZW61 710 aa15.33■□□□□ 0.05
TRIM28-207ENST00000597136 ADAT2Q7Z6V5 191 aaKnown RBP15.33■□□□□ 0.05
TRIM28-207ENST00000597136 CCDC26Q8TAB7 109 aa15.33■□□□□ 0.05
TRIM28-207ENST00000597136 SPON2Q9BUD6 331 aa15.33■□□□□ 0.05
TRIM28-207ENST00000597136 KLC2Q9H0B6 622 aa15.33■□□□□ 0.05
TRIM28-207ENST00000597136 PRDM16Q9HAZ2 1276 aa15.33■□□□□ 0.05
TRIM28-207ENST00000597136 CD248Q9HCU0 757 aa15.33■□□□□ 0.05
TRIM28-207ENST00000597136 ETNK2Q9NVF9 386 aa15.33■□□□□ 0.05
TRIM28-207ENST00000597136 VPS28Q9UK41 221 aa15.33■□□□□ 0.05
TRIM28-207ENST00000597136 PLA2G4CQ9UP65 541 aa15.33■□□□□ 0.05
TRIM28-207ENST00000597136 SLC8A2Q9UPR5 921 aa15.33■□□□□ 0.05
TRIM28-207ENST00000597136 ACTL7AQ9Y615 435 aa15.33■□□□□ 0.05
TRIM28-207ENST00000597136 RIF1Q5UIP0 2472 aaKnown RBP15.33■□□□□ 0.04
TRIM28-207ENST00000597136 KNL1Q8NG31 2342 aa15.32■□□□□ 0.04
TRIM28-207ENST00000597136 ILVBLA1L0T0 632 aa15.32■□□□□ 0.04
TRIM28-207ENST00000597136 DCLK1O15075 740 aa15.32■□□□□ 0.04
TRIM28-207ENST00000597136 FGF10O15520 208 aaPredicted RBP15.32■□□□□ 0.04
TRIM28-207ENST00000597136 MT-CO1P00395 513 aa15.32■□□□□ 0.04
TRIM28-207ENST00000597136 ATP5BP06576 529 aaKnown RBP15.32■□□□□ 0.04
TRIM28-207ENST00000597136 HOXB2P14652 356 aa15.32■□□□□ 0.04
TRIM28-207ENST00000597136 PAFAH1B1P43034 410 aa15.32■□□□□ 0.04
TRIM28-207ENST00000597136 NUBP1P53384 320 aa15.32■□□□□ 0.04
TRIM28-207ENST00000597136 DYNLT1P63172 113 aa15.32■□□□□ 0.04
TRIM28-207ENST00000597136 ECT2LQ008S8 904 aa15.32■□□□□ 0.04
TRIM28-207ENST00000597136 FNDC3BQ53EP0 1204 aaKnown RBP15.32■□□□□ 0.04
TRIM28-207ENST00000597136 C6orf118Q5T5N4 469 aa15.32■□□□□ 0.04
TRIM28-207ENST00000597136 PLD5Q8N7P1 536 aa15.32■□□□□ 0.04
TRIM28-207ENST00000597136 RTL3Q8N8U3 475 aaKnown RBP15.32■□□□□ 0.04
TRIM28-207ENST00000597136 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.32■□□□□ 0.04
TRIM28-207ENST00000597136 ARHGEF2Q92974 986 aaKnown RBP15.32■□□□□ 0.04
TRIM28-207ENST00000597136 ACDQ96AP0 544 aa15.32■□□□□ 0.04
TRIM28-207ENST00000597136 GABRG3Q99928 467 aa15.32■□□□□ 0.04
TRIM28-207ENST00000597136 TMEM245Q9H330 911 aa15.32■□□□□ 0.04
TRIM28-207ENST00000597136 CATSPERBQ9H7T0 1116 aa15.32■□□□□ 0.04
TRIM28-207ENST00000597136 L2HGDHQ9H9P8 463 aa15.32■□□□□ 0.04
TRIM28-207ENST00000597136 LRRK1Q38SD2 2015 aa15.32■□□□□ 0.04
TRIM28-207ENST00000597136 WASH4PA8MWX3 477 aa15.32■□□□□ 0.04
TRIM28-207ENST00000597136 TTC34A8MYJ7 566 aa15.32■□□□□ 0.04
TRIM28-207ENST00000597136 APOL1O14791 398 aa15.32■□□□□ 0.04
TRIM28-207ENST00000597136 ZFXP17010 805 aaPredicted RBP15.32■□□□□ 0.04
TRIM28-207ENST00000597136 MAPKAPK2P49137 400 aa15.32■□□□□ 0.04
TRIM28-207ENST00000597136 FNTBP49356 437 aa15.32■□□□□ 0.04
TRIM28-207ENST00000597136 OXCT1P55809 520 aa15.32■□□□□ 0.04
TRIM28-207ENST00000597136 SIX1Q15475 284 aaPredicted RBP15.32■□□□□ 0.04
TRIM28-207ENST00000597136 HSF5Q4G112 596 aaPredicted RBP15.32■□□□□ 0.04
TRIM28-207ENST00000597136 EOGTQ5NDL2 527 aa15.32■□□□□ 0.04
TRIM28-207ENST00000597136 NCBP2-AS2Q69YL0 99 aa15.32■□□□□ 0.04
TRIM28-207ENST00000597136 SDE2Q6IQ49 451 aa15.32■□□□□ 0.04
TRIM28-207ENST00000597136 SERPINA13PQ6UXR4 307 aa15.32■□□□□ 0.04
TRIM28-207ENST00000597136 LINGO4Q6UY18 593 aa15.32■□□□□ 0.04
TRIM28-207ENST00000597136 TP53INP2Q8IXH6 220 aa15.32■□□□□ 0.04
TRIM28-207ENST00000597136 MAIP1Q8WWC4 291 aa15.32■□□□□ 0.04
TRIM28-207ENST00000597136 SLC6A17Q9H1V8 727 aa15.32■□□□□ 0.04
TRIM28-207ENST00000597136 VPS51Q9UID3 782 aa15.32■□□□□ 0.04
TRIM28-207ENST00000597136 ZFHX2Q9C0A1 2572 aaPredicted RBP15.32■□□□□ 0.04
TRIM28-207ENST00000597136 TNRC6BQ9UPQ9 1833 aaKnown RBP15.32■□□□□ 0.04
TRIM28-207ENST00000597136 K7ERQ8 282 aa15.31■□□□□ 0.04
TRIM28-207ENST00000597136 ZMPSTE24O75844 475 aa15.31■□□□□ 0.04
TRIM28-207ENST00000597136 PAPSS2O95340 614 aaPredicted RBP15.31■□□□□ 0.04
TRIM28-207ENST00000597136 ASLP04424 464 aa15.31■□□□□ 0.04
TRIM28-207ENST00000597136 EPHX1P07099 455 aa15.31■□□□□ 0.04
TRIM28-207ENST00000597136 VAV1P15498 845 aa15.31■□□□□ 0.04
TRIM28-207ENST00000597136 PAFAH1B3Q15102 231 aaKnown RBP15.31■□□□□ 0.04
TRIM28-207ENST00000597136 TMCO3Q6UWJ1 677 aa15.31■□□□□ 0.04
TRIM28-207ENST00000597136 LEKR1Q6ZMV7 388 aa15.31■□□□□ 0.04
TRIM28-207ENST00000597136 ZNF572Q7Z3I7 529 aaPredicted RBP15.31■□□□□ 0.04
TRIM28-207ENST00000597136 TRMT11Q7Z4G4 463 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms