RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 KIRREL3Q8IZU9 778 aa23.09■■□□□ 1.29
SRRM1-222ENST00000596378 PPP4R1Q8TF05 950 aa23.09■■□□□ 1.29
SRRM1-222ENST00000596378 CLPTM1LQ96KA5 538 aa23.09■■□□□ 1.29
SRRM1-222ENST00000596378 HAPLN3Q96S86 360 aa23.09■■□□□ 1.29
SRRM1-222ENST00000596378 TBL1YQ9BQ87 522 aa23.09■■□□□ 1.29
SRRM1-222ENST00000596378 FICDQ9BVA6 458 aa23.09■■□□□ 1.29
SRRM1-222ENST00000596378 RPL26L1Q9UNX3 145 aaKnown RBP23.09■■□□□ 1.29
SRRM1-222ENST00000596378 G3V2L1 256 aa23.08■■□□□ 1.29
SRRM1-222ENST00000596378 KRT36O76013 467 aa23.08■■□□□ 1.29
SRRM1-222ENST00000596378 GRK2P25098 689 aa23.08■■□□□ 1.29
SRRM1-222ENST00000596378 TUBP50607 506 aa23.08■■□□□ 1.29
SRRM1-222ENST00000596378 SESN3P58005 492 aa23.08■■□□□ 1.29
SRRM1-222ENST00000596378 BRMS1LQ5PSV4 323 aa23.08■■□□□ 1.29
SRRM1-222ENST00000596378 KLHDC9Q8NEP7 349 aa23.08■■□□□ 1.29
SRRM1-222ENST00000596378 KIFC1Q9BW19 673 aa23.08■■□□□ 1.29
SRRM1-222ENST00000596378 ATXN3LQ9H3M9 355 aa23.08■■□□□ 1.29
SRRM1-222ENST00000596378 CACNG3O60359 315 aa23.08■■□□□ 1.28
SRRM1-222ENST00000596378 HLA-DQB2P05538 268 aa23.08■■□□□ 1.28
SRRM1-222ENST00000596378 PRKAR2AP13861 404 aaKnown RBP23.08■■□□□ 1.28
SRRM1-222ENST00000596378 CYP2C18P33260 490 aa23.08■■□□□ 1.28
SRRM1-222ENST00000596378 AVPR1AP37288 418 aa23.08■■□□□ 1.28
SRRM1-222ENST00000596378 IDH3AP50213 366 aa23.08■■□□□ 1.28
SRRM1-222ENST00000596378 ERFP50548 548 aa23.08■■□□□ 1.28
SRRM1-222ENST00000596378 TRIM71Q2Q1W2 868 aaKnown RBP23.08■■□□□ 1.28
SRRM1-222ENST00000596378 RABGAP1LQ5R372 815 aa23.08■■□□□ 1.28
SRRM1-222ENST00000596378 RTN4RL1Q86UN2 441 aaPredicted RBP23.08■■□□□ 1.28
SRRM1-222ENST00000596378 RSRC1Q96IZ7 334 aaKnown RBP23.08■■□□□ 1.28
SRRM1-222ENST00000596378 UROC1Q96N76 676 aa23.08■■□□□ 1.28
SRRM1-222ENST00000596378 GLOD4Q9HC38 313 aa23.08■■□□□ 1.28
SRRM1-222ENST00000596378 HS3ST4Q9Y661 456 aa23.08■■□□□ 1.28
SRRM1-222ENST00000596378 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.07■■□□□ 1.28
SRRM1-222ENST00000596378 SPECC1L-ADORA2AF8WAN1 911 aa23.07■■□□□ 1.28
SRRM1-222ENST00000596378 PHGDHO43175 533 aaKnown RBP23.07■■□□□ 1.28
SRRM1-222ENST00000596378 CA12O43570 354 aa23.07■■□□□ 1.28
SRRM1-222ENST00000596378 TIMM44O43615 452 aa23.07■■□□□ 1.28
SRRM1-222ENST00000596378 PMPCBO75439 489 aa23.07■■□□□ 1.28
SRRM1-222ENST00000596378 USP4Q13107 963 aa23.07■■□□□ 1.28
SRRM1-222ENST00000596378 ITGA7Q13683 1181 aa23.07■■□□□ 1.28
SRRM1-222ENST00000596378 DDR2Q16832 855 aa23.07■■□□□ 1.28
SRRM1-222ENST00000596378 AGR3Q8TD06 166 aa23.07■■□□□ 1.28
SRRM1-222ENST00000596378 FAM161BQ96MY7 647 aa23.07■■□□□ 1.28
SRRM1-222ENST00000596378 TRIM62Q9BVG3 475 aa23.07■■□□□ 1.28
SRRM1-222ENST00000596378 ZNF195O14628 629 aa23.07■■□□□ 1.28
SRRM1-222ENST00000596378 MPOP05164 745 aa23.07■■□□□ 1.28
SRRM1-222ENST00000596378 GABRB3P28472 473 aa23.07■■□□□ 1.28
SRRM1-222ENST00000596378 HOXC13P31276 330 aa23.07■■□□□ 1.28
SRRM1-222ENST00000596378 PTDSS1P48651 473 aaKnown RBP23.07■■□□□ 1.28
SRRM1-222ENST00000596378 CCNG1P51959 295 aa23.07■■□□□ 1.28
SRRM1-222ENST00000596378 CSE1LP55060 971 aaKnown RBP23.07■■□□□ 1.28
SRRM1-222ENST00000596378 RCN1Q15293 331 aa23.07■■□□□ 1.28
SRRM1-222ENST00000596378 DENND5AQ6IQ26 1287 aa23.07■■□□□ 1.28
SRRM1-222ENST00000596378 RAPH1Q70E73 1250 aa23.07■■□□□ 1.28
SRRM1-222ENST00000596378 BEND5Q7L4P6 421 aa23.07■■□□□ 1.28
SRRM1-222ENST00000596378 LINC00523Q86TU6 105 aa23.07■■□□□ 1.28
SRRM1-222ENST00000596378 TMPRSS6Q8IU80 811 aa23.07■■□□□ 1.28
SRRM1-222ENST00000596378 DENND6AQ8IWF6 608 aa23.07■■□□□ 1.28
SRRM1-222ENST00000596378 POU5F2Q8N7G0 328 aa23.07■■□□□ 1.28
SRRM1-222ENST00000596378 ZNF781Q8N8C0 355 aa23.07■■□□□ 1.28
SRRM1-222ENST00000596378 OR6Y1Q8NGX8 325 aa23.07■■□□□ 1.28
SRRM1-222ENST00000596378 IL12RB2Q99665 862 aa23.07■■□□□ 1.28
SRRM1-222ENST00000596378 CATSPERBQ9H7T0 1116 aa23.07■■□□□ 1.28
SRRM1-222ENST00000596378 DCLRE1BQ9H816 532 aa23.07■■□□□ 1.28
SRRM1-222ENST00000596378 SLC2A6Q9UGQ3 507 aa23.07■■□□□ 1.28
SRRM1-222ENST00000596378 APOBEC2Q9Y235 224 aaKnown RBP23.07■■□□□ 1.28
SRRM1-222ENST00000596378 PRG3Q9Y2Y8 225 aaPredicted RBP23.07■■□□□ 1.28
SRRM1-222ENST00000596378 AAR2Q9Y312 384 aaKnown RBP23.07■■□□□ 1.28
SRRM1-222ENST00000596378 E9PAM4 449 aa23.06■■□□□ 1.28
SRRM1-222ENST00000596378 TYMPP19971 482 aa23.06■■□□□ 1.28
SRRM1-222ENST00000596378 CDC25CP30307 473 aa23.06■■□□□ 1.28
SRRM1-222ENST00000596378 GRK4P32298 578 aa23.06■■□□□ 1.28
SRRM1-222ENST00000596378 HARS2P49590 506 aaKnown RBP23.06■■□□□ 1.28
SRRM1-222ENST00000596378 NKX3-2P78367 333 aa23.06■■□□□ 1.28
SRRM1-222ENST00000596378 MPP1Q00013 466 aa23.06■■□□□ 1.28
SRRM1-222ENST00000596378 SREBF2Q12772 1141 aa23.06■■□□□ 1.28
SRRM1-222ENST00000596378 CTBP1Q13363 440 aa23.06■■□□□ 1.28
SRRM1-222ENST00000596378 ZC3HC1Q86WB0 502 aaKnown RBP23.06■■□□□ 1.28
SRRM1-222ENST00000596378 GPATCH11Q8N954 259 aa23.06■■□□□ 1.28
SRRM1-222ENST00000596378 FCRL5Q96RD9 977 aa23.06■■□□□ 1.28
SRRM1-222ENST00000596378 FTHL17Q9BXU8 183 aa23.06■■□□□ 1.28
SRRM1-222ENST00000596378 NMRAL1Q9HBL8 299 aa23.06■■□□□ 1.28
SRRM1-222ENST00000596378 RBM22Q9NW64 420 aaKnown RBP eCLIP23.06■■□□□ 1.289e-7■■■■□ 19.9
SRRM1-222ENST00000596378 PCDHB8Q9UN66 801 aa23.06■■□□□ 1.28
SRRM1-222ENST00000596378 PLA2G4CQ9UP65 541 aa23.06■■□□□ 1.28
SRRM1-222ENST00000596378 TK2O00142 265 aa23.05■■□□□ 1.28
SRRM1-222ENST00000596378 MATN3O15232 486 aa23.05■■□□□ 1.28
SRRM1-222ENST00000596378 VAPBO95292 243 aa23.05■■□□□ 1.28
SRRM1-222ENST00000596378 CHRNA4P43681 627 aa23.05■■□□□ 1.28
SRRM1-222ENST00000596378 MXRA7P84157 204 aa23.05■■□□□ 1.28
SRRM1-222ENST00000596378 ZNF460Q14592 562 aa23.05■■□□□ 1.28
SRRM1-222ENST00000596378 NOMO2Q5JPE7 1267 aa23.05■■□□□ 1.28
SRRM1-222ENST00000596378 CLLU1OSQ5K130 101 aa23.05■■□□□ 1.28
SRRM1-222ENST00000596378 PDPK2PQ6A1A2 396 aa23.05■■□□□ 1.28
SRRM1-222ENST00000596378 ESRP1Q6NXG1 681 aaKnown RBP23.05■■□□□ 1.28
SRRM1-222ENST00000596378 GPR152Q8TDT2 470 aa23.05■■□□□ 1.28
SRRM1-222ENST00000596378 SIKE1Q9BRV8 207 aa23.05■■□□□ 1.28
SRRM1-222ENST00000596378 SHCBP1LQ9BZQ2 653 aa23.05■■□□□ 1.28
SRRM1-222ENST00000596378 FGF10O15520 208 aaPredicted RBP23.05■■□□□ 1.28
SRRM1-222ENST00000596378 SIN3BO75182 1162 aa23.05■■□□□ 1.28
SRRM1-222ENST00000596378 AHSGP02765 367 aa23.05■■□□□ 1.28
SRRM1-222ENST00000596378 RPLP2P05387 115 aaKnown RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms