RNA–Protein interactions for RNA: ENST00000596161.5

CCDC61-205, Transcript of coiled-coil domain containing 61, humanhuman

TSL 4

Gene CCDC61, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-205ENST00000596161 CCDC173Q0VFZ6 552 aa20.46■□□□□ 0.87
CCDC61-205ENST00000596161 BYSLQ13895 437 aaKnown RBP20.46■□□□□ 0.87
CCDC61-205ENST00000596161 ARHGAP12Q8IWW6 846 aa20.46■□□□□ 0.87
CCDC61-205ENST00000596161 NPWQ8N729 165 aa20.46■□□□□ 0.87
CCDC61-205ENST00000596161 PCDH19Q8TAB3 1148 aa20.46■□□□□ 0.87
CCDC61-205ENST00000596161 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.46■□□□□ 0.87
CCDC61-205ENST00000596161 FRS2Q8WU20 508 aa20.46■□□□□ 0.87
CCDC61-205ENST00000596161 UBE2Q2Q8WVN8 375 aa20.46■□□□□ 0.87
CCDC61-205ENST00000596161 RBM41Q96IZ5 413 aaKnown RBP20.46■□□□□ 0.87
CCDC61-205ENST00000596161 RNF157Q96PX1 679 aa20.46■□□□□ 0.87
CCDC61-205ENST00000596161 MAK16Q9BXY0 300 aaKnown RBP20.46■□□□□ 0.87
CCDC61-205ENST00000596161 CEP44Q9C0F1 390 aa20.46■□□□□ 0.87
CCDC61-205ENST00000596161 ETNK2Q9NVF9 386 aa20.46■□□□□ 0.87
CCDC61-205ENST00000596161 AMFRQ9UKV5 643 aa20.46■□□□□ 0.87
CCDC61-205ENST00000596161 PPP2R2CQ9Y2T4 447 aa20.46■□□□□ 0.87
CCDC61-205ENST00000596161 FARP1Q9Y4F1 1045 aaPredicted RBP20.46■□□□□ 0.87
CCDC61-205ENST00000596161 CHD5Q8TDI0 1954 aa20.46■□□□□ 0.87
CCDC61-205ENST00000596161 CKAP5Q14008 2032 aa20.46■□□□□ 0.87
CCDC61-205ENST00000596161 DFFAO00273 331 aa20.45■□□□□ 0.86
CCDC61-205ENST00000596161 RNASEH1O60930 286 aaKnown RBP20.45■□□□□ 0.86
CCDC61-205ENST00000596161 PALMO75781 387 aa20.45■□□□□ 0.86
CCDC61-205ENST00000596161 ZRANB2O95218 330 aaKnown RBP eCLIP20.45■□□□□ 0.86
CCDC61-205ENST00000596161 MT-CO1P00395 513 aa20.45■□□□□ 0.86
CCDC61-205ENST00000596161 NDUFV2P19404 249 aa20.45■□□□□ 0.86
CCDC61-205ENST00000596161 CTNNA2P26232 953 aa20.45■□□□□ 0.86
CCDC61-205ENST00000596161 CTNNA1P35221 906 aaKnown RBP20.45■□□□□ 0.86
CCDC61-205ENST00000596161 PAPOLAP51003 745 aaKnown RBP20.45■□□□□ 0.86
CCDC61-205ENST00000596161 COPAP53621 1224 aa20.45■□□□□ 0.86
CCDC61-205ENST00000596161 PAFAH1B3Q15102 231 aaKnown RBP20.45■□□□□ 0.86
CCDC61-205ENST00000596161 USP39Q53GS9 565 aaKnown RBP20.45■□□□□ 0.86
CCDC61-205ENST00000596161 C22orf39Q6P5X5 142 aa20.45■□□□□ 0.86
CCDC61-205ENST00000596161 KIAA1324Q6UXG2 1013 aaKnown RBP20.45■□□□□ 0.86
CCDC61-205ENST00000596161 PEX26Q7Z412 305 aa20.45■□□□□ 0.86
CCDC61-205ENST00000596161 TMPRSS6Q8IU80 811 aa20.45■□□□□ 0.86
CCDC61-205ENST00000596161 PCDH20Q8N6Y1 951 aaKnown RBP20.45■□□□□ 0.86
CCDC61-205ENST00000596161 PRCCQ92733 491 aaPredicted RBP20.45■□□□□ 0.86
CCDC61-205ENST00000596161 PTPRN2Q92932 1015 aa20.45■□□□□ 0.86
CCDC61-205ENST00000596161 RNF25Q96BH1 459 aaPredicted RBP20.45■□□□□ 0.86
CCDC61-205ENST00000596161 ERLEC1Q96DZ1 483 aa20.45■□□□□ 0.86
CCDC61-205ENST00000596161 MRGPRX1Q96LB2 322 aa20.45■□□□□ 0.86
CCDC61-205ENST00000596161 TPSD1Q9BZJ3 242 aa20.45■□□□□ 0.86
CCDC61-205ENST00000596161 MTG2Q9H4K7 406 aa20.45■□□□□ 0.86
CCDC61-205ENST00000596161 PCDHA3Q9Y5H8 950 aa20.45■□□□□ 0.86
CCDC61-205ENST00000596161 C3orf70A6NLC5 250 aaPredicted RBP20.44■□□□□ 0.86
CCDC61-205ENST00000596161 MIF4GDA9UHW6 222 aaKnown RBP20.44■□□□□ 0.86
CCDC61-205ENST00000596161 PRAMEF11O60813 436 aa20.44■□□□□ 0.86
CCDC61-205ENST00000596161 ZFXP17010 805 aaPredicted RBP20.44■□□□□ 0.86
CCDC61-205ENST00000596161 RECQLP46063 649 aaPredicted RBP20.44■□□□□ 0.86
CCDC61-205ENST00000596161 ZBTB16Q05516 673 aa20.44■□□□□ 0.86
CCDC61-205ENST00000596161 ELAVL3Q14576 367 aaKnown RBP20.44■□□□□ 0.86
CCDC61-205ENST00000596161 INO80DQ53TQ3 878 aaPredicted RBP20.44■□□□□ 0.86
CCDC61-205ENST00000596161 C9orf64Q5T6V5 341 aa20.44■□□□□ 0.86
CCDC61-205ENST00000596161 ZNF776Q68DI1 518 aaPredicted RBP20.44■□□□□ 0.86
CCDC61-205ENST00000596161 Q6ZVU0 165 aa20.44■□□□□ 0.86
CCDC61-205ENST00000596161 DSG4Q86SJ6 1040 aa20.44■□□□□ 0.86
CCDC61-205ENST00000596161 NT5DC3Q86UY8 548 aa20.44■□□□□ 0.86
CCDC61-205ENST00000596161 LRRC49Q8IUZ0 686 aa20.44■□□□□ 0.86
CCDC61-205ENST00000596161 RCOR2Q8IZ40 523 aa20.44■□□□□ 0.86
CCDC61-205ENST00000596161 EXD1Q8NHP7 514 aa20.44■□□□□ 0.86
CCDC61-205ENST00000596161 OR8D1Q8WZ84 308 aa20.44■□□□□ 0.86
CCDC61-205ENST00000596161 ISG20Q96AZ6 181 aaKnown RBP20.44■□□□□ 0.86
CCDC61-205ENST00000596161 SIPA1Q96FS4 1042 aa20.44■□□□□ 0.86
CCDC61-205ENST00000596161 MKRN2Q9H000 416 aaKnown RBP20.44■□□□□ 0.86
CCDC61-205ENST00000596161 SP110Q9HB58 689 aa20.44■□□□□ 0.86
CCDC61-205ENST00000596161 UBA2Q9UBT2 640 aaPredicted RBP20.44■□□□□ 0.86
CCDC61-205ENST00000596161 MFHAS1Q9Y4C4 1052 aa20.44■□□□□ 0.86
CCDC61-205ENST00000596161 K7ERQ8 282 aa20.43■□□□□ 0.86
CCDC61-205ENST00000596161 ALOX15BO15296 676 aa20.43■□□□□ 0.86
CCDC61-205ENST00000596161 SMAD6O43541 496 aaKnown RBP20.43■□□□□ 0.86
CCDC61-205ENST00000596161 LILRB5O75023 590 aa20.43■□□□□ 0.86
CCDC61-205ENST00000596161 ZNF217O75362 1048 aa20.43■□□□□ 0.86
CCDC61-205ENST00000596161 ACADMP11310 421 aa20.43■□□□□ 0.86
CCDC61-205ENST00000596161 CETN2P41208 172 aa20.43■□□□□ 0.86
CCDC61-205ENST00000596161 IL10RBQ08334 325 aa20.43■□□□□ 0.86
CCDC61-205ENST00000596161 TFDP2Q14188 446 aa20.43■□□□□ 0.86
CCDC61-205ENST00000596161 NCBP2-AS2Q69YL0 99 aa20.43■□□□□ 0.86
CCDC61-205ENST00000596161 MFSD7Q6UXD7 560 aa20.43■□□□□ 0.86
CCDC61-205ENST00000596161 RFX6Q8HWS3 928 aa20.43■□□□□ 0.86
CCDC61-205ENST00000596161 ATPAF2Q8N5M1 289 aa20.43■□□□□ 0.86
CCDC61-205ENST00000596161 UBL4BQ8N7F7 174 aa20.43■□□□□ 0.86
CCDC61-205ENST00000596161 KRT35Q92764 455 aa20.43■□□□□ 0.86
CCDC61-205ENST00000596161 SPACA7Q96KW9 195 aa20.43■□□□□ 0.86
CCDC61-205ENST00000596161 ALS2CR12Q96Q35 445 aa20.43■□□□□ 0.86
CCDC61-205ENST00000596161 RSPH9Q9H1X1 276 aaPredicted RBP20.43■□□□□ 0.86
CCDC61-205ENST00000596161 LZTFL1Q9NQ48 299 aa20.43■□□□□ 0.86
CCDC61-205ENST00000596161 IPO11Q9UI26 975 aaKnown RBP20.43■□□□□ 0.86
CCDC61-205ENST00000596161 CAPN6Q9Y6Q1 641 aa20.43■□□□□ 0.86
CCDC61-205ENST00000596161 APOL1O14791 398 aa20.42■□□□□ 0.86
CCDC61-205ENST00000596161 CD160O95971 181 aa20.42■□□□□ 0.86
CCDC61-205ENST00000596161 DNTTP04053 509 aa20.42■□□□□ 0.86
CCDC61-205ENST00000596161 VAV1P15498 845 aa20.42■□□□□ 0.86
CCDC61-205ENST00000596161 MARCKSL1P49006 195 aa20.42■□□□□ 0.86
CCDC61-205ENST00000596161 RWDD2BP57060 319 aa20.42■□□□□ 0.86
CCDC61-205ENST00000596161 SFSWAPQ12872 951 aaKnown RBP20.42■□□□□ 0.86
CCDC61-205ENST00000596161 SPOCD1Q6ZMY3 1216 aa20.42■□□□□ 0.86
CCDC61-205ENST00000596161 C11orf74Q86VG3 221 aa20.42■□□□□ 0.86
CCDC61-205ENST00000596161 CCDC50Q8IVM0 306 aa20.42■□□□□ 0.86
CCDC61-205ENST00000596161 STK40Q8N2I9 435 aa20.42■□□□□ 0.86
CCDC61-205ENST00000596161 PQLC3Q8N755 202 aa20.42■□□□□ 0.86
CCDC61-205ENST00000596161 GAB3Q8WWW8 586 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms