RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 CHRNA3P32297 505 aa17.44■□□□□ 0.38
CCDC9-202ENST00000595659 SCNN1AP37088 669 aa17.44■□□□□ 0.38
CCDC9-202ENST00000595659 CLDN6P56747 220 aa17.44■□□□□ 0.38
CCDC9-202ENST00000595659 TAS2R38P59533 333 aa17.44■□□□□ 0.38
CCDC9-202ENST00000595659 DNAJC3Q13217 504 aa17.44■□□□□ 0.38
CCDC9-202ENST00000595659 CDO1Q16878 200 aa17.44■□□□□ 0.38
CCDC9-202ENST00000595659 SLC45A4Q5BKX6 768 aa17.44■□□□□ 0.38
CCDC9-202ENST00000595659 C6orf118Q5T5N4 469 aa17.44■□□□□ 0.38
CCDC9-202ENST00000595659 NAPEPLDQ6IQ20 393 aa17.44■□□□□ 0.38
CCDC9-202ENST00000595659 TMPRSS7Q7RTY8 843 aa17.44■□□□□ 0.38
CCDC9-202ENST00000595659 SETD3Q86TU7 594 aaPredicted RBP17.44■□□□□ 0.38
CCDC9-202ENST00000595659 PROSER1Q86XN7 944 aa17.44■□□□□ 0.38
CCDC9-202ENST00000595659 SPATS2Q86XZ4 545 aaKnown RBP17.44■□□□□ 0.38
CCDC9-202ENST00000595659 MSANTD4Q8NCY6 345 aa17.44■□□□□ 0.38
CCDC9-202ENST00000595659 SAP25Q8TEE9 199 aa17.44■□□□□ 0.38
CCDC9-202ENST00000595659 FAM131CQ96AQ9 280 aa17.44■□□□□ 0.38
CCDC9-202ENST00000595659 ARRDC3Q96B67 414 aa17.44■□□□□ 0.38
CCDC9-202ENST00000595659 KDM4CQ9H3R0 1056 aa17.44■□□□□ 0.38
CCDC9-202ENST00000595659 CCDC86Q9H6F5 360 aaKnown RBP17.44■□□□□ 0.38
CCDC9-202ENST00000595659 NOCTQ9UK39 431 aaKnown RBP17.44■□□□□ 0.38
CCDC9-202ENST00000595659 PAXBP1Q9Y5B6 917 aa17.44■□□□□ 0.38
CCDC9-202ENST00000595659 ACTL7AQ9Y615 435 aa17.44■□□□□ 0.38
CCDC9-202ENST00000595659 ZZEF1O43149 2961 aa17.44■□□□□ 0.38
CCDC9-202ENST00000595659 WDFY3Q8IZQ1 3526 aa17.43■□□□□ 0.38
CCDC9-202ENST00000595659 IGF2RP11717 2491 aa17.43■□□□□ 0.38
CCDC9-202ENST00000595659 IGLV3-10A0A075B6K4 115 aa17.43■□□□□ 0.38
CCDC9-202ENST00000595659 ALOX15BO15296 676 aa17.43■□□□□ 0.38
CCDC9-202ENST00000595659 SLC31A1O15431 190 aa17.43■□□□□ 0.38
CCDC9-202ENST00000595659 SLC7A4O43246 635 aa17.43■□□□□ 0.38
CCDC9-202ENST00000595659 RNGTTO60942 597 aaKnown RBP17.43■□□□□ 0.38
CCDC9-202ENST00000595659 PRLRP16471 622 aa17.43■□□□□ 0.38
CCDC9-202ENST00000595659 CDR2Q01850 454 aa17.43■□□□□ 0.38
CCDC9-202ENST00000595659 STAT4Q14765 748 aa17.43■□□□□ 0.38
CCDC9-202ENST00000595659 C15orf59Q2T9L4 293 aaPredicted RBP17.43■□□□□ 0.38
CCDC9-202ENST00000595659 INAVAQ3KP66 663 aa17.43■□□□□ 0.38
CCDC9-202ENST00000595659 ARSIQ5FYB1 569 aa17.43■□□□□ 0.38
CCDC9-202ENST00000595659 PIP5KL1Q5T9C9 394 aa17.43■□□□□ 0.38
CCDC9-202ENST00000595659 CDKAL1Q5VV42 579 aa17.43■□□□□ 0.38
CCDC9-202ENST00000595659 DRC7Q8IY82 874 aa17.43■□□□□ 0.38
CCDC9-202ENST00000595659 MFSD2AQ8NA29 543 aa17.43■□□□□ 0.38
CCDC9-202ENST00000595659 DCAF4L2Q8NA75 395 aa17.43■□□□□ 0.38
CCDC9-202ENST00000595659 GRIN3AQ8TCU5 1115 aa17.43■□□□□ 0.38
CCDC9-202ENST00000595659 GPT2Q8TD30 523 aa17.43■□□□□ 0.38
CCDC9-202ENST00000595659 MAGEB5Q9BZ81 275 aa17.43■□□□□ 0.38
CCDC9-202ENST00000595659 FANCLQ9NW38 375 aa17.43■□□□□ 0.38
CCDC9-202ENST00000595659 FARP1Q9Y4F1 1045 aaPredicted RBP17.43■□□□□ 0.38
CCDC9-202ENST00000595659 A0A1W2PQU0 124 aa17.42■□□□□ 0.38
CCDC9-202ENST00000595659 ENC1O14682 589 aa17.42■□□□□ 0.38
CCDC9-202ENST00000595659 LDOC1O95751 146 aaPredicted RBP17.42■□□□□ 0.38
CCDC9-202ENST00000595659 SOX5P35711 763 aa17.42■□□□□ 0.38
CCDC9-202ENST00000595659 ARRB1P49407 418 aaPredicted RBP17.42■□□□□ 0.38
CCDC9-202ENST00000595659 DNA2P51530 1060 aa17.42■□□□□ 0.38
CCDC9-202ENST00000595659 FMO1Q01740 532 aa17.42■□□□□ 0.38
CCDC9-202ENST00000595659 CT47A1Q5JQC4 288 aaPredicted RBP17.42■□□□□ 0.38
CCDC9-202ENST00000595659 C19orf48Q6RUI8 117 aa17.42■□□□□ 0.38
CCDC9-202ENST00000595659 BNIPLQ7Z465 357 aa17.42■□□□□ 0.38
CCDC9-202ENST00000595659 TRIM69Q86WT6 500 aa17.42■□□□□ 0.38
CCDC9-202ENST00000595659 JOSD2Q8TAC2 188 aa17.42■□□□□ 0.38
CCDC9-202ENST00000595659 RXFP2Q8WXD0 754 aa17.42■□□□□ 0.38
CCDC9-202ENST00000595659 CNDP2Q96KP4 475 aaKnown RBP17.42■□□□□ 0.38
CCDC9-202ENST00000595659 PCMTD1Q96MG8 357 aaPredicted RBP17.42■□□□□ 0.38
CCDC9-202ENST00000595659 HAPLN3Q96S86 360 aa17.42■□□□□ 0.38
CCDC9-202ENST00000595659 PCDHB18PQ96TA0 734 aa17.42■□□□□ 0.38
CCDC9-202ENST00000595659 C11orf70Q9BRQ4 267 aa17.42■□□□□ 0.38
CCDC9-202ENST00000595659 ZYG11BQ9C0D3 744 aa17.42■□□□□ 0.38
CCDC9-202ENST00000595659 CAAP1Q9H8G2 361 aa17.42■□□□□ 0.38
CCDC9-202ENST00000595659 ATP13A1Q9HD20 1204 aa17.42■□□□□ 0.38
CCDC9-202ENST00000595659 FZD3Q9NPG1 666 aa17.42■□□□□ 0.38
CCDC9-202ENST00000595659 ZNF212Q9UDV6 495 aa17.42■□□□□ 0.38
CCDC9-202ENST00000595659 SDC3O75056 442 aa17.41■□□□□ 0.38
CCDC9-202ENST00000595659 CYP1A1P04798 512 aaPredicted RBP17.41■□□□□ 0.38
CCDC9-202ENST00000595659 MMP8P22894 467 aa17.41■□□□□ 0.38
CCDC9-202ENST00000595659 EPHA8P29322 1005 aaPredicted RBP17.41■□□□□ 0.38
CCDC9-202ENST00000595659 ACVRL1P37023 503 aa17.41■□□□□ 0.38
CCDC9-202ENST00000595659 JAM2P57087 298 aa17.41■□□□□ 0.38
CCDC9-202ENST00000595659 CCDC14Q49A88 953 aa17.41■□□□□ 0.38
CCDC9-202ENST00000595659 SETMARQ53H47 684 aaPredicted RBP17.41■□□□□ 0.38
CCDC9-202ENST00000595659 FKBP15Q5T1M5 1219 aa17.41■□□□□ 0.38
CCDC9-202ENST00000595659 C22orf39Q6P5X5 142 aa17.41■□□□□ 0.38
CCDC9-202ENST00000595659 DPY19L3Q6ZPD9 716 aa17.41■□□□□ 0.38
CCDC9-202ENST00000595659 CCDC114Q96M63 670 aa17.41■□□□□ 0.38
CCDC9-202ENST00000595659 PREBQ9HCU5 417 aa17.41■□□□□ 0.38
CCDC9-202ENST00000595659 DYRK4Q9NR20 520 aa17.41■□□□□ 0.38
CCDC9-202ENST00000595659 TPX2Q9ULW0 747 aaKnown RBP17.41■□□□□ 0.38
CCDC9-202ENST00000595659 DMTF1Q9Y222 760 aa17.41■□□□□ 0.38
CCDC9-202ENST00000595659 ILVBLA1L0T0 632 aa17.4■□□□□ 0.38
CCDC9-202ENST00000595659 TRABD2BA6NFA1 517 aa17.4■□□□□ 0.38
CCDC9-202ENST00000595659 FAM72CH0Y354 149 aa17.4■□□□□ 0.38
CCDC9-202ENST00000595659 PRAMEF26H0Y7S4 382 aa17.4■□□□□ 0.38
CCDC9-202ENST00000595659 ZNF821O75541 412 aaPredicted RBP17.4■□□□□ 0.38
CCDC9-202ENST00000595659 LEFTY1O75610 366 aa17.4■□□□□ 0.38
CCDC9-202ENST00000595659 ZMPSTE24O75844 475 aa17.4■□□□□ 0.38
CCDC9-202ENST00000595659 PCDH8O95206 1070 aa17.4■□□□□ 0.38
CCDC9-202ENST00000595659 TPM2P07951 284 aa17.4■□□□□ 0.38
CCDC9-202ENST00000595659 RECQLP46063 649 aaPredicted RBP17.4■□□□□ 0.38
CCDC9-202ENST00000595659 COPB1P53618 953 aaKnown RBP17.4■□□□□ 0.38
CCDC9-202ENST00000595659 GNA12Q03113 381 aa17.4■□□□□ 0.38
CCDC9-202ENST00000595659 SYCP1Q15431 976 aa17.4■□□□□ 0.38
CCDC9-202ENST00000595659 FAM72AQ5TYM5 149 aa17.4■□□□□ 0.38
CCDC9-202ENST00000595659 FAM72DQ6L9T8 149 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms