RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 PCSK1NQ9UHG2 260 aa11.24□□□□□ -0.61
SHKBP1-206ENST00000595523 SARDHQ9UL12 918 aa11.24□□□□□ -0.61
SHKBP1-206ENST00000595523 SLCO1B1Q9Y6L6 691 aa11.24□□□□□ -0.61
SHKBP1-206ENST00000595523 A0A1W2PP55 124 aa11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 SSU72P8A0A1W2PR75 194 aa11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 METTL12A8MUP2 240 aa11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 WASH4PA8MWX3 477 aa11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 PRR5-ARHGAP8B1AHC4 643 aa11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 PLK4O00444 970 aa11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 RNASEH1O60930 286 aaKnown RBP11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 MAOBP27338 520 aa11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 SLC8A1P32418 973 aa11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 HOXD12P35452 270 aa11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 ID4P47928 161 aa11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 SERPINH1P50454 418 aaKnown RBP11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 CLCN6P51797 869 aa11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 ARHGAP8P85298 464 aa11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 TTC31Q49AM3 519 aaPredicted RBP11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 ACCSLQ4AC99 568 aa11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 TRIM61Q5EBN2 209 aa11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 ERMARDQ5T6L9 678 aa11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 DCAF12L1Q5VU92 463 aa11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 TXNRD3NBQ6F5E7 133 aa11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 C22orf39Q6P5X5 142 aa11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 SLC23A3Q6PIS1 610 aa11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 CPNE8Q86YQ8 564 aa11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 NIPA2Q8N8Q9 360 aa11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 C12orf50Q8NA57 414 aaPredicted RBP11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 ATP11CQ8NB49 1132 aa11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 CHST14Q8NCH0 376 aa11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 OR2A12Q8NGT7 310 aa11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 C1orf216Q8TAB5 229 aa11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 DNASE2BQ8WZ79 361 aa11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 FOXJ1Q92949 421 aa11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 FAM131CQ96AQ9 280 aa11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 VOPP1Q96AW1 172 aa11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 EPAS1Q99814 870 aa11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 TRIM5Q9C035 493 aa11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 KLC2Q9H0B6 622 aa11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 MAGEH1Q9H213 219 aa11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 NEUROG2Q9H2A3 272 aa11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 TNKS2Q9H2K2 1166 aa11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 DHX35Q9H5Z1 703 aaKnown RBP11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 CAPN10Q9HC96 672 aa11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 FSCN3Q9NQT6 498 aa11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 FBXL12Q9NXK8 326 aa11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 EVLQ9UI08 416 aaPredicted RBP11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 PPM1HQ9ULR3 514 aa11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 SCML1Q9UN30 329 aa11.23□□□□□ -0.61
SHKBP1-206ENST00000595523 MCF2LO15068 1137 aa11.22□□□□□ -0.61
SHKBP1-206ENST00000595523 ALOX15BO15296 676 aa11.22□□□□□ -0.61
SHKBP1-206ENST00000595523 FGF10O15520 208 aaPredicted RBP11.22□□□□□ -0.61
SHKBP1-206ENST00000595523 BNIP3LO60238 219 aa11.22□□□□□ -0.61
SHKBP1-206ENST00000595523 FOXD2O60548 495 aaPredicted RBP11.22□□□□□ -0.61
SHKBP1-206ENST00000595523 RAMP2O60895 175 aa11.22□□□□□ -0.61
SHKBP1-206ENST00000595523 RNF8O76064 485 aa11.22□□□□□ -0.61
SHKBP1-206ENST00000595523 SEMA4FO95754 770 aa11.22□□□□□ -0.61
SHKBP1-206ENST00000595523 ADH1BP00325 375 aa11.22□□□□□ -0.61
SHKBP1-206ENST00000595523 IL1BP01584 269 aa11.22□□□□□ -0.61
SHKBP1-206ENST00000595523 IGHV4-34P06331 123 aa11.22□□□□□ -0.61
SHKBP1-206ENST00000595523 DESP17661 470 aa11.22□□□□□ -0.61
SHKBP1-206ENST00000595523 C5AR1P21730 350 aa11.22□□□□□ -0.61
SHKBP1-206ENST00000595523 PCK1P35558 622 aa11.22□□□□□ -0.61
SHKBP1-206ENST00000595523 TPI1P60174 286 aa11.22□□□□□ -0.61
SHKBP1-206ENST00000595523 SLC25A11Q02978 314 aaKnown RBP11.22□□□□□ -0.61
SHKBP1-206ENST00000595523 SPEGQ15772 3267 aa11.22□□□□□ -0.61
SHKBP1-206ENST00000595523 AASDHQ4L235 1098 aaPredicted RBP11.22□□□□□ -0.61
SHKBP1-206ENST00000595523 IL31Q6EBC2 164 aa11.22□□□□□ -0.61
SHKBP1-206ENST00000595523 RETSATQ6NUM9 610 aa11.22□□□□□ -0.61
SHKBP1-206ENST00000595523 UMODL1-AS1Q8N2C9 162 aa11.22□□□□□ -0.61
SHKBP1-206ENST00000595523 TC2NQ8N9U0 490 aa11.22□□□□□ -0.61
SHKBP1-206ENST00000595523 NETO1Q8TDF5 533 aa11.22□□□□□ -0.61
SHKBP1-206ENST00000595523 OR8D1Q8WZ84 308 aa11.22□□□□□ -0.61
SHKBP1-206ENST00000595523 HMCESQ96FZ2 354 aa11.22□□□□□ -0.61
SHKBP1-206ENST00000595523 ORAI3Q9BRQ5 295 aa11.22□□□□□ -0.61
SHKBP1-206ENST00000595523 EDEM2Q9BV94 578 aa11.22□□□□□ -0.61
SHKBP1-206ENST00000595523 BTBD1Q9H0C5 482 aa11.22□□□□□ -0.61
SHKBP1-206ENST00000595523 PCED1AQ9H1Q7 454 aa11.22□□□□□ -0.61
SHKBP1-206ENST00000595523 SGK2Q9HBY8 427 aa11.22□□□□□ -0.61
SHKBP1-206ENST00000595523 CHD8Q9HCK8 2581 aa11.22□□□□□ -0.61
SHKBP1-206ENST00000595523 SPTLC3Q9NUV7 552 aa11.22□□□□□ -0.61
SHKBP1-206ENST00000595523 ANAPC7Q9UJX3 599 aa11.22□□□□□ -0.61
SHKBP1-206ENST00000595523 FZD4Q9ULV1 537 aa11.22□□□□□ -0.61
SHKBP1-206ENST00000595523 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.22□□□□□ -0.61
SHKBP1-206ENST00000595523 FCF1Q9Y324 198 aaKnown RBP11.22□□□□□ -0.61
SHKBP1-206ENST00000595523 CXorf51AA0A1B0GTR3 108 aa11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 MEI4A8MW99 385 aa11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 EIF3CLB5ME19 914 aaKnown RBP11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 RASA4BC9J798 803 aa11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 EEF2KO00418 725 aaKnown RBP11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 CDX4O14627 284 aaPredicted RBP11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 SLC30A4O14863 429 aa11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 KHNYNO15037 678 aaKnown RBP11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 RASA4O43374 803 aa11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 KDELR3O43731 214 aa11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 PRPSAP2O60256 369 aa11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 RNASEH2AO75792 299 aaKnown RBP11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 SERPINF2P08697 491 aa11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 GOT1P17174 413 aa11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 HTR7P34969 479 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms