RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 LAMC2Q13753 1193 aa13.47□□□□□ -0.25
VRK3-209ENST00000594948 PRAMEF18Q5VWM3 479 aa13.47□□□□□ -0.25
VRK3-209ENST00000594948 C9orf57Q5W0N0 161 aa13.47□□□□□ -0.25
VRK3-209ENST00000594948 LIMS2Q7Z4I7 341 aa13.47□□□□□ -0.25
VRK3-209ENST00000594948 FBXO16Q8IX29 292 aaPredicted RBP13.47□□□□□ -0.25
VRK3-209ENST00000594948 KLHDC8BQ8IXV7 354 aa13.47□□□□□ -0.25
VRK3-209ENST00000594948 C7orf31Q8N865 590 aa13.47□□□□□ -0.25
VRK3-209ENST00000594948 BHLHE22Q8NFJ8 381 aaPredicted RBP13.47□□□□□ -0.25
VRK3-209ENST00000594948 COPS5Q92905 334 aa13.47□□□□□ -0.25
VRK3-209ENST00000594948 DUS3LQ96G46 650 aaKnown RBP13.47□□□□□ -0.25
VRK3-209ENST00000594948 SLC2A13Q96QE2 648 aa13.47□□□□□ -0.25
VRK3-209ENST00000594948 TSPAN18Q96SJ8 248 aa13.47□□□□□ -0.25
VRK3-209ENST00000594948 AGAP2Q99490 1192 aa13.47□□□□□ -0.25
VRK3-209ENST00000594948 ZCWPW1Q9H0M4 648 aa13.47□□□□□ -0.25
VRK3-209ENST00000594948 WDR55Q9H6Y2 383 aaPredicted RBP13.47□□□□□ -0.25
VRK3-209ENST00000594948 GDAP2Q9NXN4 497 aa13.47□□□□□ -0.25
VRK3-209ENST00000594948 EPS15L1Q9UBC2 864 aa13.47□□□□□ -0.25
VRK3-209ENST00000594948 SUCOQ9UBS9 1254 aaKnown RBP13.47□□□□□ -0.25
VRK3-209ENST00000594948 GMEB1Q9Y692 573 aa13.47□□□□□ -0.25
VRK3-209ENST00000594948 TRPC5OSA6NMA1 111 aa13.46□□□□□ -0.25
VRK3-209ENST00000594948 TARM1B6A8C7 271 aa13.46□□□□□ -0.25
VRK3-209ENST00000594948 FZD9O00144 591 aa13.46□□□□□ -0.25
VRK3-209ENST00000594948 PEX10O60683 326 aa13.46□□□□□ -0.25
VRK3-209ENST00000594948 USP2O75604 605 aaPredicted RBP13.46□□□□□ -0.25
VRK3-209ENST00000594948 C8BP07358 591 aa13.46□□□□□ -0.25
VRK3-209ENST00000594948 CHRNGP07510 517 aa13.46□□□□□ -0.25
VRK3-209ENST00000594948 SBK3P0C264 359 aa13.46□□□□□ -0.25
VRK3-209ENST00000594948 GNL1P36915 607 aaPredicted RBP13.46□□□□□ -0.25
VRK3-209ENST00000594948 GMPRP36959 345 aa13.46□□□□□ -0.25
VRK3-209ENST00000594948 ARHGAP1Q07960 439 aa13.46□□□□□ -0.25
VRK3-209ENST00000594948 ART3Q13508 389 aa13.46□□□□□ -0.25
VRK3-209ENST00000594948 SLC12A1Q13621 1099 aa13.46□□□□□ -0.25
VRK3-209ENST00000594948 UGP2Q16851 508 aa13.46□□□□□ -0.25
VRK3-209ENST00000594948 DALRD3Q5D0E6 543 aaKnown RBP13.46□□□□□ -0.25
VRK3-209ENST00000594948 ARL13AQ5H913 290 aaPredicted RBP13.46□□□□□ -0.25
VRK3-209ENST00000594948 PPM1LQ5SGD2 360 aa13.46□□□□□ -0.25
VRK3-209ENST00000594948 KLC3Q6P597 504 aa13.46□□□□□ -0.25
VRK3-209ENST00000594948 LILRA2Q8N149 483 aa13.46□□□□□ -0.25
VRK3-209ENST00000594948 METTL25Q8N6Q8 603 aa13.46□□□□□ -0.25
VRK3-209ENST00000594948 TRPC4APQ8TEL6 797 aa13.46□□□□□ -0.25
VRK3-209ENST00000594948 NLRP7Q8WX94 980 aa13.46□□□□□ -0.25
VRK3-209ENST00000594948 KCTD13Q8WZ19 329 aa13.46□□□□□ -0.25
VRK3-209ENST00000594948 GFM2Q969S9 779 aaKnown RBP13.46□□□□□ -0.25
VRK3-209ENST00000594948 HDAC11Q96DB2 347 aa13.46□□□□□ -0.25
VRK3-209ENST00000594948 ZNF560Q96MR9 790 aa13.46□□□□□ -0.25
VRK3-209ENST00000594948 PKP2Q99959 881 aa13.46□□□□□ -0.25
VRK3-209ENST00000594948 HAUS8Q9BT25 410 aa13.46□□□□□ -0.25
VRK3-209ENST00000594948 TASP1Q9H6P5 420 aa13.46□□□□□ -0.25
VRK3-209ENST00000594948 COPS7BQ9H9Q2 264 aaPredicted RBP13.46□□□□□ -0.25
VRK3-209ENST00000594948 CAB39LQ9H9S4 337 aa13.46□□□□□ -0.25
VRK3-209ENST00000594948 UBQLN1Q9UMX0 589 aaKnown RBP13.46□□□□□ -0.25
VRK3-209ENST00000594948 PIRO00625 290 aa13.46□□□□□ -0.26
VRK3-209ENST00000594948 CD4P01730 458 aa13.46□□□□□ -0.26
VRK3-209ENST00000594948 VTNP04004 478 aa13.46□□□□□ -0.26
VRK3-209ENST00000594948 SPATA31D3P0C874 917 aa13.46□□□□□ -0.26
VRK3-209ENST00000594948 YBX3P16989 372 aaKnown RBP eCLIP13.46□□□□□ -0.264e-7■■□□□ 11.9
VRK3-209ENST00000594948 EPHA3P29320 983 aa13.46□□□□□ -0.26
VRK3-209ENST00000594948 PNPLA4P41247 253 aa13.46□□□□□ -0.26
VRK3-209ENST00000594948 TXNL4AP83876 142 aaKnown RBP13.46□□□□□ -0.26
VRK3-209ENST00000594948 MS4A2Q01362 244 aa13.46□□□□□ -0.26
VRK3-209ENST00000594948 SEMA3BQ13214 749 aa13.46□□□□□ -0.26
VRK3-209ENST00000594948 KCTD2Q14681 263 aa13.46□□□□□ -0.26
VRK3-209ENST00000594948 MAPRE2Q15555 327 aa13.46□□□□□ -0.26
VRK3-209ENST00000594948 DLG2Q15700 870 aa13.46□□□□□ -0.26
VRK3-209ENST00000594948 KIZQ2M2Z5 673 aa13.46□□□□□ -0.26
VRK3-209ENST00000594948 MYLK3Q32MK0 819 aa13.46□□□□□ -0.26
VRK3-209ENST00000594948 SPATA31D4Q6ZUB0 917 aa13.46□□□□□ -0.26
VRK3-209ENST00000594948 ZC3HC1Q86WB0 502 aaKnown RBP13.46□□□□□ -0.26
VRK3-209ENST00000594948 CHERPQ8IWX8 916 aaKnown RBP13.46□□□□□ -0.26
VRK3-209ENST00000594948 LSMEM2Q8N112 164 aa13.46□□□□□ -0.26
VRK3-209ENST00000594948 DNAAF3Q8N9W5 541 aa13.46□□□□□ -0.26
VRK3-209ENST00000594948 RIN3Q8TB24 985 aa13.46□□□□□ -0.26
VRK3-209ENST00000594948 WNT8BQ93098 351 aa13.46□□□□□ -0.26
VRK3-209ENST00000594948 ASB9Q96DX5 294 aa13.46□□□□□ -0.26
VRK3-209ENST00000594948 TNIP3Q96KP6 325 aa13.46□□□□□ -0.26
VRK3-209ENST00000594948 CNBD2Q96M20 576 aa13.46□□□□□ -0.26
VRK3-209ENST00000594948 ZMAT2Q96NC0 199 aaKnown RBP13.46□□□□□ -0.26
VRK3-209ENST00000594948 CAMKK2Q96RR4 588 aa13.46□□□□□ -0.26
VRK3-209ENST00000594948 KIFC1Q9BW19 673 aa13.46□□□□□ -0.26
VRK3-209ENST00000594948 CEP41Q9BYV8 373 aa13.46□□□□□ -0.26
VRK3-209ENST00000594948 SENP6Q9GZR1 1112 aaPredicted RBP13.46□□□□□ -0.26
VRK3-209ENST00000594948 SNX25Q9H3E2 840 aa13.46□□□□□ -0.26
VRK3-209ENST00000594948 C20orf96Q9NUD7 363 aaPredicted RBP13.46□□□□□ -0.26
VRK3-209ENST00000594948 TUBGCP4Q9UGJ1 667 aa13.46□□□□□ -0.26
VRK3-209ENST00000594948 ZDHHC2Q9UIJ5 367 aa13.46□□□□□ -0.26
VRK3-209ENST00000594948 SARDHQ9UL12 918 aa13.46□□□□□ -0.26
VRK3-209ENST00000594948 E2F8A0AVK6 867 aa13.45□□□□□ -0.26
VRK3-209ENST00000594948 TCAF2A6NFQ2 919 aa13.45□□□□□ -0.26
VRK3-209ENST00000594948 ASB14A6NK59 587 aa13.45□□□□□ -0.26
VRK3-209ENST00000594948 NEMP1O14524 444 aa13.45□□□□□ -0.26
VRK3-209ENST00000594948 VAPBO95292 243 aa13.45□□□□□ -0.26
VRK3-209ENST00000594948 PGK2P07205 417 aa13.45□□□□□ -0.26
VRK3-209ENST00000594948 ENO3P13929 434 aaPredicted RBP13.45□□□□□ -0.26
VRK3-209ENST00000594948 TRAP1Q12931 704 aaKnown RBP13.45□□□□□ -0.26
VRK3-209ENST00000594948 VGLL4Q14135 290 aa13.45□□□□□ -0.26
VRK3-209ENST00000594948 GRM3Q14832 879 aa13.45□□□□□ -0.26
VRK3-209ENST00000594948 TBC1D25Q3MII6 688 aa13.45□□□□□ -0.26
VRK3-209ENST00000594948 FBXO47Q5MNV8 452 aa13.45□□□□□ -0.26
VRK3-209ENST00000594948 NAPEPLDQ6IQ20 393 aa13.45□□□□□ -0.26
VRK3-209ENST00000594948 LRRC8EQ6NSJ5 796 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms