RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 DGCR14Q96DF8 476 aaKnown RBP16.8■□□□□ 0.28
LIG1-206ENST00000594067 SLC2A13Q96QE2 648 aa16.8■□□□□ 0.28
LIG1-206ENST00000594067 ULBP1Q9BZM6 244 aa16.8■□□□□ 0.28
LIG1-206ENST00000594067 TCF7L2Q9NQB0 619 aa16.8■□□□□ 0.28
LIG1-206ENST00000594067 NDUFA13Q9P0J0 144 aa16.8■□□□□ 0.28
LIG1-206ENST00000594067 SLC39A10Q9ULF5 831 aa16.8■□□□□ 0.28
LIG1-206ENST00000594067 SSX2IPQ9Y2D8 614 aa16.8■□□□□ 0.28
LIG1-206ENST00000594067 PYGLP06737 847 aa16.8■□□□□ 0.28
LIG1-206ENST00000594067 NFKB1P19838 968 aa16.8■□□□□ 0.28
LIG1-206ENST00000594067 CYP2B6P20813 491 aa16.8■□□□□ 0.28
LIG1-206ENST00000594067 ITGA7Q13683 1181 aa16.8■□□□□ 0.28
LIG1-206ENST00000594067 DGKDQ16760 1214 aa16.8■□□□□ 0.28
LIG1-206ENST00000594067 HIC2Q96JB3 615 aa16.8■□□□□ 0.28
LIG1-206ENST00000594067 CACNG4Q9UBN1 327 aa16.8■□□□□ 0.28
LIG1-206ENST00000594067 PHF24Q9UPV7 400 aa16.8■□□□□ 0.28
LIG1-206ENST00000594067 YJEFN3A6XGL0 299 aa16.79■□□□□ 0.28
LIG1-206ENST00000594067 TMEM114B3SHH9 223 aa16.79■□□□□ 0.28
LIG1-206ENST00000594067 TK2O00142 265 aa16.79■□□□□ 0.28
LIG1-206ENST00000594067 AIM2O14862 343 aa16.79■□□□□ 0.28
LIG1-206ENST00000594067 TFAP2AP05549 437 aa16.79■□□□□ 0.28
LIG1-206ENST00000594067 CYP2C9P11712 490 aa16.79■□□□□ 0.28
LIG1-206ENST00000594067 ALDH1A3P47895 512 aa16.79■□□□□ 0.28
LIG1-206ENST00000594067 SH3BGRP55822 239 aaPredicted RBP16.79■□□□□ 0.28
LIG1-206ENST00000594067 R3HDM1Q15032 1099 aaKnown RBP16.79■□□□□ 0.28
LIG1-206ENST00000594067 WSCD1Q658N2 575 aa16.79■□□□□ 0.28
LIG1-206ENST00000594067 PDZD4Q76G19 769 aaPredicted RBP16.79■□□□□ 0.28
LIG1-206ENST00000594067 LIMS2Q7Z4I7 341 aa16.79■□□□□ 0.28
LIG1-206ENST00000594067 VPS39Q96JC1 886 aa16.79■□□□□ 0.28
LIG1-206ENST00000594067 PRICKLE1Q96MT3 831 aaPredicted RBP16.79■□□□□ 0.28
LIG1-206ENST00000594067 RTKNQ9BST9 563 aa16.79■□□□□ 0.28
LIG1-206ENST00000594067 DNAI2Q9GZS0 605 aa16.79■□□□□ 0.28
LIG1-206ENST00000594067 TASP1Q9H6P5 420 aa16.79■□□□□ 0.28
LIG1-206ENST00000594067 WDR6Q9NNW5 1121 aaKnown RBP16.79■□□□□ 0.28
LIG1-206ENST00000594067 NRCAMQ92823 1304 aa16.79■□□□□ 0.28
LIG1-206ENST00000594067 DENRO43583 198 aaKnown RBP16.79■□□□□ 0.28
LIG1-206ENST00000594067 PENKP01210 267 aaPredicted RBP16.79■□□□□ 0.28
LIG1-206ENST00000594067 WARSP23381 471 aaKnown RBP16.79■□□□□ 0.28
LIG1-206ENST00000594067 NMBRP28336 390 aa16.79■□□□□ 0.28
LIG1-206ENST00000594067 PRDX6P30041 224 aa16.79■□□□□ 0.28
LIG1-206ENST00000594067 PPIDQ08752 370 aaKnown RBP16.79■□□□□ 0.28
LIG1-206ENST00000594067 GRM3Q14832 879 aa16.79■□□□□ 0.28
LIG1-206ENST00000594067 PPM1LQ5SGD2 360 aa16.79■□□□□ 0.28
LIG1-206ENST00000594067 KIAA0319Q5VV43 1072 aa16.79■□□□□ 0.28
LIG1-206ENST00000594067 KCTD11Q693B1 232 aa16.79■□□□□ 0.28
LIG1-206ENST00000594067 MARVELD2Q8N4S9 558 aa16.79■□□□□ 0.28
LIG1-206ENST00000594067 ARRDC4Q8NCT1 418 aa16.79■□□□□ 0.28
LIG1-206ENST00000594067 DNAJB3Q8WWF6 145 aa16.79■□□□□ 0.28
LIG1-206ENST00000594067 SREK1Q8WXA9 508 aaKnown RBP16.79■□□□□ 0.28
LIG1-206ENST00000594067 IRAK4Q9NWZ3 460 aa16.79■□□□□ 0.28
LIG1-206ENST00000594067 DTNAQ9Y4J8 743 aa16.79■□□□□ 0.28
LIG1-206ENST00000594067 RALGAPA2Q2PPJ7 1873 aa16.79■□□□□ 0.28
LIG1-206ENST00000594067 VILLO15195 856 aa16.78■□□□□ 0.28
LIG1-206ENST00000594067 PHGDHO43175 533 aaKnown RBP16.78■□□□□ 0.28
LIG1-206ENST00000594067 GLDCP23378 1020 aa16.78■□□□□ 0.28
LIG1-206ENST00000594067 GLRBP48167 497 aa16.78■□□□□ 0.28
LIG1-206ENST00000594067 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.78■□□□□ 0.28
LIG1-206ENST00000594067 DUSP28Q4G0W2 176 aa16.78■□□□□ 0.28
LIG1-206ENST00000594067 MPP4Q96JB8 637 aa16.78■□□□□ 0.28
LIG1-206ENST00000594067 ILKAPQ9H0C8 392 aaPredicted RBP16.78■□□□□ 0.28
LIG1-206ENST00000594067 GBA3Q9H227 469 aa16.78■□□□□ 0.28
LIG1-206ENST00000594067 OXSMQ9NWU1 459 aa16.78■□□□□ 0.28
LIG1-206ENST00000594067 UBAP1Q9NZ09 502 aa16.78■□□□□ 0.28
LIG1-206ENST00000594067 PSMD13Q9UNM6 376 aa16.78■□□□□ 0.28
LIG1-206ENST00000594067 RRN3P2A6NIE6 340 aa16.78■□□□□ 0.28
LIG1-206ENST00000594067 XPOTO43592 962 aaKnown RBP16.78■□□□□ 0.28
LIG1-206ENST00000594067 TIMM44O43615 452 aa16.78■□□□□ 0.28
LIG1-206ENST00000594067 DNAJA2O60884 412 aa16.78■□□□□ 0.28
LIG1-206ENST00000594067 FBXO21O94952 628 aa16.78■□□□□ 0.28
LIG1-206ENST00000594067 ASLP04424 464 aa16.78■□□□□ 0.28
LIG1-206ENST00000594067 SMIM10L2AP0DMW4 78 aa16.78■□□□□ 0.28
LIG1-206ENST00000594067 SMIM10L2BP0DMW5 78 aa16.78■□□□□ 0.28
LIG1-206ENST00000594067 PIK3R1P27986 724 aa16.78■□□□□ 0.28
LIG1-206ENST00000594067 EPHA3P29320 983 aa16.78■□□□□ 0.28
LIG1-206ENST00000594067 AVPR1AP37288 418 aa16.78■□□□□ 0.28
LIG1-206ENST00000594067 RANBP1P43487 201 aa16.78■□□□□ 0.28
LIG1-206ENST00000594067 NUDT2P50583 147 aa16.78■□□□□ 0.28
LIG1-206ENST00000594067 SNX32Q86XE0 403 aa16.78■□□□□ 0.28
LIG1-206ENST00000594067 PQLC1Q8N2U9 271 aa16.78■□□□□ 0.28
LIG1-206ENST00000594067 KCTD13Q8WZ19 329 aa16.78■□□□□ 0.28
LIG1-206ENST00000594067 KCNK16Q96T55 309 aa16.78■□□□□ 0.28
LIG1-206ENST00000594067 ACE2Q9BYF1 805 aaPredicted RBP16.78■□□□□ 0.28
LIG1-206ENST00000594067 NCAM1P13591 858 aa16.77■□□□□ 0.28
LIG1-206ENST00000594067 KCNE1P15382 129 aa16.77■□□□□ 0.28
LIG1-206ENST00000594067 RGS2P41220 211 aa16.77■□□□□ 0.28
LIG1-206ENST00000594067 RPL5P46777 297 aaKnown RBP16.77■□□□□ 0.28
LIG1-206ENST00000594067 SEMA3BQ13214 749 aa16.77■□□□□ 0.28
LIG1-206ENST00000594067 MAP7Q14244 749 aa16.77■□□□□ 0.28
LIG1-206ENST00000594067 UBXN11Q5T124 520 aa16.77■□□□□ 0.28
LIG1-206ENST00000594067 GPRIN1Q7Z2K8 1008 aa16.77■□□□□ 0.28
LIG1-206ENST00000594067 DPP9Q86TI2 863 aa16.77■□□□□ 0.28
LIG1-206ENST00000594067 DCUN1D1Q96GG9 259 aa16.77■□□□□ 0.28
LIG1-206ENST00000594067 APBA2Q99767 749 aa16.77■□□□□ 0.28
LIG1-206ENST00000594067 DDIT4Q9NX09 232 aa16.77■□□□□ 0.28
LIG1-206ENST00000594067 TMCO1Q9UM00 188 aa16.77■□□□□ 0.28
LIG1-206ENST00000594067 PCDHGB4Q9UN71 923 aa16.77■□□□□ 0.28
LIG1-206ENST00000594067 PCDHGB5Q9Y5G0 923 aa16.77■□□□□ 0.28
LIG1-206ENST00000594067 JCHAINP01591 159 aa16.77■□□□□ 0.27
LIG1-206ENST00000594067 GRIA4P48058 902 aa16.77■□□□□ 0.27
LIG1-206ENST00000594067 CSE1LP55060 971 aaKnown RBP16.77■□□□□ 0.27
LIG1-206ENST00000594067 INHBCP55103 352 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms