RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 CATSPERBQ9H7T0 1116 aa20.08■□□□□ 0.81
LSM4-203ENST00000593829 ERVW-1Q9UQF0 538 aa20.08■□□□□ 0.81
LSM4-203ENST00000593829 PCDHGA2Q9Y5H1 932 aa20.08■□□□□ 0.81
LSM4-203ENST00000593829 MYO18AQ92614 2054 aaKnown RBP20.08■□□□□ 0.81
LSM4-203ENST00000593829 ATXN2Q99700 1313 aaKnown RBP20.08■□□□□ 0.8
LSM4-203ENST00000593829 CCDC163A0A0D9SF12 145 aa20.08■□□□□ 0.8
LSM4-203ENST00000593829 PJA2O43164 708 aa20.08■□□□□ 0.8
LSM4-203ENST00000593829 SRPRAP08240 638 aaKnown RBP20.08■□□□□ 0.8
LSM4-203ENST00000593829 PRKCHP24723 683 aa20.08■□□□□ 0.8
LSM4-203ENST00000593829 CTSOP43234 321 aaPredicted RBP20.08■□□□□ 0.8
LSM4-203ENST00000593829 PXNP49023 591 aaPredicted RBP20.08■□□□□ 0.8
LSM4-203ENST00000593829 FNTBP49356 437 aa20.08■□□□□ 0.8
LSM4-203ENST00000593829 NUMBP49757 651 aa20.08■□□□□ 0.8
LSM4-203ENST00000593829 ZNF135P52742 658 aaPredicted RBP20.08■□□□□ 0.8
LSM4-203ENST00000593829 DMWDQ09019 674 aa20.08■□□□□ 0.8
LSM4-203ENST00000593829 SMTNL2Q2TAL5 461 aa20.08■□□□□ 0.8
LSM4-203ENST00000593829 GLE1Q53GS7 698 aaKnown RBP20.08■□□□□ 0.8
LSM4-203ENST00000593829 PPP6R3Q5H9R7 873 aaPredicted RBP20.08■□□□□ 0.8
LSM4-203ENST00000593829 KCNT1Q5JUK3 1230 aa20.08■□□□□ 0.8
LSM4-203ENST00000593829 ZC3H14Q6PJT7 736 aaKnown RBP20.08■□□□□ 0.8
LSM4-203ENST00000593829 LONP2Q86WA8 852 aa20.08■□□□□ 0.8
LSM4-203ENST00000593829 KDM1BQ8NB78 822 aa20.08■□□□□ 0.8
LSM4-203ENST00000593829 HSPH1Q92598 858 aa20.08■□□□□ 0.8
LSM4-203ENST00000593829 KCTD15Q96SI1 283 aaPredicted RBP20.08■□□□□ 0.8
LSM4-203ENST00000593829 YY1AP1Q9H869 796 aa20.08■□□□□ 0.8
LSM4-203ENST00000593829 EBF1Q9UH73 591 aa20.08■□□□□ 0.8
LSM4-203ENST00000593829 TFR2Q9UP52 801 aa20.08■□□□□ 0.8
LSM4-203ENST00000593829 HYOU1Q9Y4L1 999 aa20.08■□□□□ 0.8
LSM4-203ENST00000593829 RAD54BQ9Y620 910 aa20.08■□□□□ 0.8
LSM4-203ENST00000593829 DOCK4Q8N1I0 1966 aa20.08■□□□□ 0.8
LSM4-203ENST00000593829 MUC6Q6W4X9 2439 aa20.07■□□□□ 0.8
LSM4-203ENST00000593829 TCRBV21S2A2A0A5A6 115 aa20.07■□□□□ 0.8
LSM4-203ENST00000593829 TMEM110-MUSTN1A8MSY1 372 aa20.07■□□□□ 0.8
LSM4-203ENST00000593829 EEF2KO00418 725 aaKnown RBP20.07■□□□□ 0.8
LSM4-203ENST00000593829 ZNF185O15231 689 aa20.07■□□□□ 0.8
LSM4-203ENST00000593829 FGF10O15520 208 aaPredicted RBP20.07■□□□□ 0.8
LSM4-203ENST00000593829 SYNCRIPO60506 623 aaKnown RBP20.07■□□□□ 0.8
LSM4-203ENST00000593829 EPHX1P07099 455 aa20.07■□□□□ 0.8
LSM4-203ENST00000593829 RARAP10276 462 aa20.07■□□□□ 0.8
LSM4-203ENST00000593829 C2orf54Q08AI8 447 aa20.07■□□□□ 0.8
LSM4-203ENST00000593829 ANO7Q6IWH7 933 aa20.07■□□□□ 0.8
LSM4-203ENST00000593829 RTL3Q8N8U3 475 aaKnown RBP20.07■□□□□ 0.8
LSM4-203ENST00000593829 ZBTB44Q8NCP5 570 aa20.07■□□□□ 0.8
LSM4-203ENST00000593829 SPATA4Q8NEY3 305 aa20.07■□□□□ 0.8
LSM4-203ENST00000593829 MRGPRX3Q96LB0 322 aa20.07■□□□□ 0.8
LSM4-203ENST00000593829 C2orf49Q9BVC5 232 aaPredicted RBP20.07■□□□□ 0.8
LSM4-203ENST00000593829 A0A0D9SEW6 157 aa20.06■□□□□ 0.8
LSM4-203ENST00000593829 ZBTB24O43167 697 aaPredicted RBP20.06■□□□□ 0.8
LSM4-203ENST00000593829 GNA12Q03113 381 aa20.06■□□□□ 0.8
LSM4-203ENST00000593829 DPYSL2Q16555 572 aa20.06■□□□□ 0.8
LSM4-203ENST00000593829 TXNRD3NBQ6F5E7 133 aa20.06■□□□□ 0.8
LSM4-203ENST00000593829 KIAA1211LQ6NV74 962 aa20.06■□□□□ 0.8
LSM4-203ENST00000593829 MYO19Q96H55 970 aa20.06■□□□□ 0.8
LSM4-203ENST00000593829 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.06■□□□□ 0.8
LSM4-203ENST00000593829 NDFIP2Q9NV92 336 aa20.06■□□□□ 0.8
LSM4-203ENST00000593829 DONSONQ9NYP3 566 aa20.06■□□□□ 0.8
LSM4-203ENST00000593829 RNF14Q9UBS8 474 aa20.06■□□□□ 0.8
LSM4-203ENST00000593829 A0A0A6YYK5 440 aaPredicted RBP20.06■□□□□ 0.8
LSM4-203ENST00000593829 WASH4PA8MWX3 477 aa20.06■□□□□ 0.8
LSM4-203ENST00000593829 EIF3HO15372 352 aaKnown RBP eCLIP20.06■□□□□ 0.8
LSM4-203ENST00000593829 DAPK3O43293 454 aa20.06■□□□□ 0.8
LSM4-203ENST00000593829 HLA-EP13747 358 aa20.06■□□□□ 0.8
LSM4-203ENST00000593829 ETFBP38117 255 aa20.06■□□□□ 0.8
LSM4-203ENST00000593829 NNMTP40261 264 aa20.06■□□□□ 0.8
LSM4-203ENST00000593829 HCAR3P49019 387 aa20.06■□□□□ 0.8
LSM4-203ENST00000593829 HADHBP55084 474 aaKnown RBP20.06■□□□□ 0.8
LSM4-203ENST00000593829 RFX8Q6ZV50 586 aa20.06■□□□□ 0.8
LSM4-203ENST00000593829 WDR5BQ86VZ2 330 aa20.06■□□□□ 0.8
LSM4-203ENST00000593829 RASSF3Q86WH2 238 aa20.06■□□□□ 0.8
LSM4-203ENST00000593829 HMGB4Q8WW32 186 aa20.06■□□□□ 0.8
LSM4-203ENST00000593829 RPL10LQ96L21 214 aaKnown RBP20.06■□□□□ 0.8
LSM4-203ENST00000593829 ALS2CR12Q96Q35 445 aa20.06■□□□□ 0.8
LSM4-203ENST00000593829 PSMB7Q99436 277 aa20.06■□□□□ 0.8
LSM4-203ENST00000593829 SPON2Q9BUD6 331 aa20.06■□□□□ 0.8
LSM4-203ENST00000593829 CAPS2Q9BXY5 557 aa20.06■□□□□ 0.8
LSM4-203ENST00000593829 CD248Q9HCU0 757 aa20.06■□□□□ 0.8
LSM4-203ENST00000593829 BCCIPQ9P287 314 aaKnown RBP eCLIP20.06■□□□□ 0.8
LSM4-203ENST00000593829 SUN2Q9UH99 717 aa20.06■□□□□ 0.8
LSM4-203ENST00000593829 SLC25A13Q9UJS0 675 aa20.06■□□□□ 0.8
LSM4-203ENST00000593829 AXIN1O15169 862 aa20.05■□□□□ 0.8
LSM4-203ENST00000593829 GOT1P17174 413 aa20.05■□□□□ 0.8
LSM4-203ENST00000593829 CPNE8Q86YQ8 564 aa20.05■□□□□ 0.8
LSM4-203ENST00000593829 DCAF4L2Q8NA75 395 aa20.05■□□□□ 0.8
LSM4-203ENST00000593829 MDGA1Q8NFP4 955 aa20.05■□□□□ 0.8
LSM4-203ENST00000593829 OR7D4Q8NG98 312 aa20.05■□□□□ 0.8
LSM4-203ENST00000593829 ERLEC1Q96DZ1 483 aa20.05■□□□□ 0.8
LSM4-203ENST00000593829 MAGEH1Q9H213 219 aa20.05■□□□□ 0.8
LSM4-203ENST00000593829 FAM86C1Q9NVL1 165 aa20.05■□□□□ 0.8
LSM4-203ENST00000593829 SLCO3A1Q9UIG8 710 aa20.05■□□□□ 0.8
LSM4-203ENST00000593829 DUSP10Q9Y6W6 482 aa20.05■□□□□ 0.8
LSM4-203ENST00000593829 R4GN57 208 aa20.05■□□□□ 0.8
LSM4-203ENST00000593829 MUC22E2RYF6 1773 aaPredicted RBP20.04■□□□□ 0.8
LSM4-203ENST00000593829 MACROD2A1Z1Q3 448 aa20.04■□□□□ 0.8
LSM4-203ENST00000593829 EBAG9O00559 213 aa20.04■□□□□ 0.8
LSM4-203ENST00000593829 RAMP2O60895 175 aa20.04■□□□□ 0.8
LSM4-203ENST00000593829 ARL4AP40617 200 aa20.04■□□□□ 0.8
LSM4-203ENST00000593829 VASPP50552 380 aaPredicted RBP20.04■□□□□ 0.8
LSM4-203ENST00000593829 NHLH1Q02575 133 aa20.04■□□□□ 0.8
LSM4-203ENST00000593829 ZNF366Q8N895 744 aa20.04■□□□□ 0.8
LSM4-203ENST00000593829 OSBPL9Q96SU4 736 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms