RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 AIF1P55008 147 aa18.91■□□□□ 0.62
SHKBP1-202ENST00000593764 ARF5P84085 180 aa18.91■□□□□ 0.62
SHKBP1-202ENST00000593764 NFKBIBQ15653 356 aa18.91■□□□□ 0.62
SHKBP1-202ENST00000593764 TDRD12Q587J7 1177 aaKnown RBP18.91■□□□□ 0.62
SHKBP1-202ENST00000593764 EFHC2Q5JST6 749 aa18.91■□□□□ 0.62
SHKBP1-202ENST00000593764 HDDC3Q8N4P3 179 aa18.91■□□□□ 0.62
SHKBP1-202ENST00000593764 ZCCHC9Q8N567 271 aaKnown RBP18.91■□□□□ 0.62
SHKBP1-202ENST00000593764 OR2A12Q8NGT7 310 aa18.91■□□□□ 0.62
SHKBP1-202ENST00000593764 FNIP1Q8TF40 1166 aa18.91■□□□□ 0.62
SHKBP1-202ENST00000593764 OR8D1Q8WZ84 308 aa18.91■□□□□ 0.62
SHKBP1-202ENST00000593764 ARHGEF2Q92974 986 aaKnown RBP18.91■□□□□ 0.62
SHKBP1-202ENST00000593764 FAM131CQ96AQ9 280 aa18.91■□□□□ 0.62
SHKBP1-202ENST00000593764 OMDQ99983 421 aa18.91■□□□□ 0.62
SHKBP1-202ENST00000593764 ORAI3Q9BRQ5 295 aa18.91■□□□□ 0.62
SHKBP1-202ENST00000593764 MIR1-1HGQ9H1L0 117 aa18.91■□□□□ 0.62
SHKBP1-202ENST00000593764 ATP13A1Q9HD20 1204 aa18.91■□□□□ 0.62
SHKBP1-202ENST00000593764 DNAI1Q9UI46 699 aa18.91■□□□□ 0.62
SHKBP1-202ENST00000593764 FZD4Q9ULV1 537 aa18.91■□□□□ 0.62
SHKBP1-202ENST00000593764 A0A1B0GTW7 788 aa18.9■□□□□ 0.62
SHKBP1-202ENST00000593764 ALOX15BO15296 676 aa18.9■□□□□ 0.62
SHKBP1-202ENST00000593764 BCAT2O15382 392 aaPredicted RBP18.9■□□□□ 0.62
SHKBP1-202ENST00000593764 IGHV4-34P06331 123 aa18.9■□□□□ 0.62
SHKBP1-202ENST00000593764 CTSLP07711 333 aa18.9■□□□□ 0.62
SHKBP1-202ENST00000593764 PSMA2P25787 234 aa18.9■□□□□ 0.62
SHKBP1-202ENST00000593764 CASP14P31944 242 aa18.9■□□□□ 0.62
SHKBP1-202ENST00000593764 CLCN6P51797 869 aa18.9■□□□□ 0.62
SHKBP1-202ENST00000593764 SLC20A2Q08357 652 aa18.9■□□□□ 0.62
SHKBP1-202ENST00000593764 SFSWAPQ12872 951 aaKnown RBP18.9■□□□□ 0.62
SHKBP1-202ENST00000593764 NCEH1Q6PIU2 408 aa18.9■□□□□ 0.62
SHKBP1-202ENST00000593764 ZNF653Q96CK0 615 aa18.9■□□□□ 0.62
SHKBP1-202ENST00000593764 NOL6Q9H6R4 1146 aaKnown RBP18.9■□□□□ 0.62
SHKBP1-202ENST00000593764 ACTL7AQ9Y615 435 aa18.9■□□□□ 0.62
SHKBP1-202ENST00000593764 A0A087X0T9 212 aa18.89■□□□□ 0.61
SHKBP1-202ENST00000593764 FAM47DPA6NHR8 397 aa18.89■□□□□ 0.61
SHKBP1-202ENST00000593764 RNF103O00237 685 aa18.89■□□□□ 0.61
SHKBP1-202ENST00000593764 PLK4O00444 970 aa18.89■□□□□ 0.61
SHKBP1-202ENST00000593764 BNIP3LO60238 219 aa18.89■□□□□ 0.61
SHKBP1-202ENST00000593764 FSBPO95073 299 aa18.89■□□□□ 0.61
SHKBP1-202ENST00000593764 FAM228BP0C875 321 aa18.89■□□□□ 0.61
SHKBP1-202ENST00000593764 MYBL1P10243 752 aa18.89■□□□□ 0.61
SHKBP1-202ENST00000593764 EPHB2P29323 1055 aa18.89■□□□□ 0.61
SHKBP1-202ENST00000593764 HNRNPH3P31942 346 aaKnown RBP18.89■□□□□ 0.61
SHKBP1-202ENST00000593764 PPM1JQ5JR12 505 aa18.89■□□□□ 0.61
SHKBP1-202ENST00000593764 DAB2IPQ5VWQ8 1189 aa18.89■□□□□ 0.61
SHKBP1-202ENST00000593764 KIAA0895LQ68EN5 471 aa18.89■□□□□ 0.61
SHKBP1-202ENST00000593764 RETSATQ6NUM9 610 aa18.89■□□□□ 0.61
SHKBP1-202ENST00000593764 C22orf39Q6P5X5 142 aa18.89■□□□□ 0.61
SHKBP1-202ENST00000593764 CYP4V2Q6ZWL3 525 aaPredicted RBP18.89■□□□□ 0.61
SHKBP1-202ENST00000593764 DSG4Q86SJ6 1040 aa18.89■□□□□ 0.61
SHKBP1-202ENST00000593764 RTL3Q8N8U3 475 aaKnown RBP18.89■□□□□ 0.61
SHKBP1-202ENST00000593764 OR2I1PQ8NGU4 316 aa18.89■□□□□ 0.61
SHKBP1-202ENST00000593764 PIP4K2CQ8TBX8 421 aa18.89■□□□□ 0.61
SHKBP1-202ENST00000593764 SNX19Q92543 992 aa18.89■□□□□ 0.61
SHKBP1-202ENST00000593764 PEBP4Q96S96 227 aa18.89■□□□□ 0.61
SHKBP1-202ENST00000593764 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.89■□□□□ 0.61
SHKBP1-202ENST00000593764 GTPBP2Q9BX10 602 aaKnown RBP18.89■□□□□ 0.61
SHKBP1-202ENST00000593764 MAGEH1Q9H213 219 aa18.89■□□□□ 0.61
SHKBP1-202ENST00000593764 GPATCH2LQ9NWQ4 482 aa18.89■□□□□ 0.61
SHKBP1-202ENST00000593764 ARHGAP20Q9P2F6 1191 aa18.89■□□□□ 0.61
SHKBP1-202ENST00000593764 MYO1AQ9UBC5 1043 aa18.89■□□□□ 0.61
SHKBP1-202ENST00000593764 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.89■□□□□ 0.61
SHKBP1-202ENST00000593764 CXorf51AA0A1B0GTR3 108 aa18.88■□□□□ 0.61
SHKBP1-202ENST00000593764 WASH4PA8MWX3 477 aa18.88■□□□□ 0.61
SHKBP1-202ENST00000593764 CREB3O43889 395 aa18.88■□□□□ 0.61
SHKBP1-202ENST00000593764 TPM3P06753 285 aa18.88■□□□□ 0.61
SHKBP1-202ENST00000593764 SYPP08247 313 aa18.88■□□□□ 0.61
SHKBP1-202ENST00000593764 ETFBP38117 255 aa18.88■□□□□ 0.61
SHKBP1-202ENST00000593764 SERPINH1P50454 418 aaKnown RBP18.88■□□□□ 0.61
SHKBP1-202ENST00000593764 ADPRHP54922 357 aa18.88■□□□□ 0.61
SHKBP1-202ENST00000593764 BNC1Q01954 994 aa18.88■□□□□ 0.61
SHKBP1-202ENST00000593764 CA9Q16790 459 aa18.88■□□□□ 0.61
SHKBP1-202ENST00000593764 UAP1L1Q3KQV9 507 aa18.88■□□□□ 0.61
SHKBP1-202ENST00000593764 FAM46CQ5VWP2 391 aa18.88■□□□□ 0.61
SHKBP1-202ENST00000593764 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.88■□□□□ 0.61
SHKBP1-202ENST00000593764 MINDY1Q8N5J2 469 aa18.88■□□□□ 0.61
SHKBP1-202ENST00000593764 CHST14Q8NCH0 376 aa18.88■□□□□ 0.61
SHKBP1-202ENST00000593764 RNF214Q8ND24 703 aa18.88■□□□□ 0.61
SHKBP1-202ENST00000593764 OR2T34Q8NGX1 318 aa18.88■□□□□ 0.61
SHKBP1-202ENST00000593764 TRIM11Q96F44 468 aa18.88■□□□□ 0.61
SHKBP1-202ENST00000593764 TNKS2Q9H2K2 1166 aa18.88■□□□□ 0.61
SHKBP1-202ENST00000593764 EBF2Q9HAK2 575 aa18.88■□□□□ 0.61
SHKBP1-202ENST00000593764 OSGEPQ9NPF4 335 aa18.88■□□□□ 0.61
SHKBP1-202ENST00000593764 SCINQ9Y6U3 715 aa18.88■□□□□ 0.61
SHKBP1-202ENST00000593764 PCNX2A6NKB5 2137 aa18.88■□□□□ 0.61
SHKBP1-202ENST00000593764 LRRC72A6NJI9 287 aa18.87■□□□□ 0.61
SHKBP1-202ENST00000593764 RAMP2O60895 175 aa18.87■□□□□ 0.61
SHKBP1-202ENST00000593764 GJB3O75712 270 aa18.87■□□□□ 0.61
SHKBP1-202ENST00000593764 DESP17661 470 aa18.87■□□□□ 0.61
SHKBP1-202ENST00000593764 CD27P26842 260 aa18.87■□□□□ 0.61
SHKBP1-202ENST00000593764 MIPP30301 263 aa18.87■□□□□ 0.61
SHKBP1-202ENST00000593764 CHRNA3P32297 505 aa18.87■□□□□ 0.61
SHKBP1-202ENST00000593764 CNTN1Q12860 1018 aa18.87■□□□□ 0.61
SHKBP1-202ENST00000593764 GRIK2Q13002 908 aa18.87■□□□□ 0.61
SHKBP1-202ENST00000593764 POLD3Q15054 466 aaPredicted RBP18.87■□□□□ 0.61
SHKBP1-202ENST00000593764 POM121L1PQ3SYA9 428 aa18.87■□□□□ 0.61
SHKBP1-202ENST00000593764 ERMARDQ5T6L9 678 aa18.87■□□□□ 0.61
SHKBP1-202ENST00000593764 SPECC1LQ69YQ0 1117 aa18.87■□□□□ 0.61
SHKBP1-202ENST00000593764 DPY19L3Q6ZPD9 716 aa18.87■□□□□ 0.61
SHKBP1-202ENST00000593764 TMIEQ8NEW7 156 aa18.87■□□□□ 0.61
SHKBP1-202ENST00000593764 OR14C36Q8NHC7 312 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms