RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 RNASE9P60153 205 aaKnown RBP23.21■■□□□ 1.31
SSBP4-203ENST00000593641 PIP5KL1Q5T9C9 394 aa23.21■■□□□ 1.31
SSBP4-203ENST00000593641 NEK5Q6P3R8 708 aa23.21■■□□□ 1.31
SSBP4-203ENST00000593641 LRRC31Q6UY01 552 aa23.21■■□□□ 1.31
SSBP4-203ENST00000593641 SETD3Q86TU7 594 aaPredicted RBP23.21■■□□□ 1.31
SSBP4-203ENST00000593641 NPY6RQ99463 290 aa23.21■■□□□ 1.31
SSBP4-203ENST00000593641 MYOCQ99972 504 aa23.21■■□□□ 1.31
SSBP4-203ENST00000593641 NRSN2Q9GZP1 204 aa23.21■■□□□ 1.31
SSBP4-203ENST00000593641 PLCB1Q9NQ66 1216 aa23.21■■□□□ 1.31
SSBP4-203ENST00000593641 VPS51Q9UID3 782 aa23.21■■□□□ 1.31
SSBP4-203ENST00000593641 CA5BQ9Y2D0 317 aa23.21■■□□□ 1.31
SSBP4-203ENST00000593641 A0A1W2PQU0 124 aa23.2■■□□□ 1.3
SSBP4-203ENST00000593641 SLC31A1O15431 190 aa23.2■■□□□ 1.3
SSBP4-203ENST00000593641 SNAP91O60641 907 aa23.2■■□□□ 1.3
SSBP4-203ENST00000593641 ADCY5O95622 1261 aa23.2■■□□□ 1.3
SSBP4-203ENST00000593641 MT-CO1P00395 513 aa23.2■■□□□ 1.3
SSBP4-203ENST00000593641 F9P00740 461 aa23.2■■□□□ 1.3
SSBP4-203ENST00000593641 PRNPP04156 253 aa23.2■■□□□ 1.3
SSBP4-203ENST00000593641 CTSLP07711 333 aa23.2■■□□□ 1.3
SSBP4-203ENST00000593641 THEGLP0DJG4 465 aa23.2■■□□□ 1.3
SSBP4-203ENST00000593641 CLCN1P35523 988 aa23.2■■□□□ 1.3
SSBP4-203ENST00000593641 CXCR3P49682 368 aa23.2■■□□□ 1.3
SSBP4-203ENST00000593641 CLCN6P51797 869 aa23.2■■□□□ 1.3
SSBP4-203ENST00000593641 TAS2R38P59533 333 aa23.2■■□□□ 1.3
SSBP4-203ENST00000593641 BPIFB4P59827 614 aa23.2■■□□□ 1.3
SSBP4-203ENST00000593641 SEMG2Q02383 582 aa23.2■■□□□ 1.3
SSBP4-203ENST00000593641 CAMK4Q16566 473 aa23.2■■□□□ 1.3
SSBP4-203ENST00000593641 ALFQ53S48 1182 aa23.2■■□□□ 1.3
SSBP4-203ENST00000593641 OTUD1Q5VV17 481 aaPredicted RBP23.2■■□□□ 1.3
SSBP4-203ENST00000593641 DCAF4L2Q8NA75 395 aa23.2■■□□□ 1.3
SSBP4-203ENST00000593641 TMEM35BQ8NCS4 154 aa23.2■■□□□ 1.3
SSBP4-203ENST00000593641 SIX2Q9NPC8 291 aa23.2■■□□□ 1.3
SSBP4-203ENST00000593641 TMEM51Q9NW97 253 aa23.2■■□□□ 1.3
SSBP4-203ENST00000593641 AJAP1Q9UKB5 411 aaPredicted RBP23.2■■□□□ 1.3
SSBP4-203ENST00000593641 FOXN3O00409 490 aaPredicted RBP23.19■■□□□ 1.3
SSBP4-203ENST00000593641 PNMA6AP0CW24 399 aaPredicted RBP23.19■■□□□ 1.3
SSBP4-203ENST00000593641 PRLRP16471 622 aa23.19■■□□□ 1.3
SSBP4-203ENST00000593641 RRM1P23921 792 aa23.19■■□□□ 1.3
SSBP4-203ENST00000593641 ACP1P24666 158 aa23.19■■□□□ 1.3
SSBP4-203ENST00000593641 AKT2P31751 481 aa23.19■■□□□ 1.3
SSBP4-203ENST00000593641 RECQLP46063 649 aaPredicted RBP23.19■■□□□ 1.3
SSBP4-203ENST00000593641 DEUP1Q05D60 604 aa23.19■■□□□ 1.3
SSBP4-203ENST00000593641 MAN2A1Q16706 1144 aa23.19■■□□□ 1.3
SSBP4-203ENST00000593641 ACBD5Q5T8D3 534 aaPredicted RBP23.19■■□□□ 1.3
SSBP4-203ENST00000593641 LRRC69Q6ZNQ3 347 aa23.19■■□□□ 1.3
SSBP4-203ENST00000593641 TMEM145Q8NBT3 493 aa23.19■■□□□ 1.3
SSBP4-203ENST00000593641 TMIEQ8NEW7 156 aa23.19■■□□□ 1.3
SSBP4-203ENST00000593641 OR2A12Q8NGT7 310 aa23.19■■□□□ 1.3
SSBP4-203ENST00000593641 KLK6Q92876 244 aa23.19■■□□□ 1.3
SSBP4-203ENST00000593641 PGAP3Q96FM1 320 aaPredicted RBP23.19■■□□□ 1.3
SSBP4-203ENST00000593641 PSMB7Q99436 277 aa23.19■■□□□ 1.3
SSBP4-203ENST00000593641 HNRNPA2B1P22626 353 aaKnown RBP23.18■■□□□ 1.3
SSBP4-203ENST00000593641 DAB2P98082 770 aa23.18■■□□□ 1.3
SSBP4-203ENST00000593641 PROX2Q3B8N5 592 aa23.18■■□□□ 1.3
SSBP4-203ENST00000593641 FAM102AQ5T9C2 384 aaPredicted RBP23.18■■□□□ 1.3
SSBP4-203ENST00000593641 TFAP2DQ7Z6R9 452 aa23.18■■□□□ 1.3
SSBP4-203ENST00000593641 HORMAD1Q86X24 394 aa23.18■■□□□ 1.3
SSBP4-203ENST00000593641 IRF2BP1Q8IU81 584 aa23.18■■□□□ 1.3
SSBP4-203ENST00000593641 FAM114A1Q8IWE2 563 aa23.18■■□□□ 1.3
SSBP4-203ENST00000593641 GRIN3AQ8TCU5 1115 aa23.18■■□□□ 1.3
SSBP4-203ENST00000593641 CRELD1Q96HD1 420 aa23.18■■□□□ 1.3
SSBP4-203ENST00000593641 PPP1R16AQ96I34 528 aa23.18■■□□□ 1.3
SSBP4-203ENST00000593641 CLCA2Q9UQC9 943 aa23.18■■□□□ 1.3
SSBP4-203ENST00000593641 SNX10Q9Y5X0 201 aa23.18■■□□□ 1.3
SSBP4-203ENST00000593641 BPTFQ12830 3046 aa23.17■■□□□ 1.3
SSBP4-203ENST00000593641 K7ERQ8 282 aa23.17■■□□□ 1.3
SSBP4-203ENST00000593641 RRP8O43159 456 aaKnown RBP23.17■■□□□ 1.3
SSBP4-203ENST00000593641 SIGLEC6O43699 453 aa23.17■■□□□ 1.3
SSBP4-203ENST00000593641 PCDH8O95206 1070 aa23.17■■□□□ 1.3
SSBP4-203ENST00000593641 TFE3P19532 575 aaPredicted RBP23.17■■□□□ 1.3
SSBP4-203ENST00000593641 GLDCP23378 1020 aa23.17■■□□□ 1.3
SSBP4-203ENST00000593641 OR1E1P30953 314 aa23.17■■□□□ 1.3
SSBP4-203ENST00000593641 KCNMA1Q12791 1236 aa23.17■■□□□ 1.3
SSBP4-203ENST00000593641 ZNF211Q13398 564 aaPredicted RBP23.17■■□□□ 1.3
SSBP4-203ENST00000593641 RAPGEF1Q13905 1077 aa23.17■■□□□ 1.3
SSBP4-203ENST00000593641 RTP5Q14D33 572 aa23.17■■□□□ 1.3
SSBP4-203ENST00000593641 C22orf39Q6P5X5 142 aa23.17■■□□□ 1.3
SSBP4-203ENST00000593641 LINGO4Q6UY18 593 aa23.17■■□□□ 1.3
SSBP4-203ENST00000593641 FAM71AQ8IYT1 594 aa23.17■■□□□ 1.3
SSBP4-203ENST00000593641 MLKLQ8NB16 471 aa23.17■■□□□ 1.3
SSBP4-203ENST00000593641 RFFLQ8WZ73 363 aa23.17■■□□□ 1.3
SSBP4-203ENST00000593641 BAP1Q92560 729 aa23.17■■□□□ 1.3
SSBP4-203ENST00000593641 NT5C3BQ969T7 300 aa23.17■■□□□ 1.3
SSBP4-203ENST00000593641 ARRDC3Q96B67 414 aa23.17■■□□□ 1.3
SSBP4-203ENST00000593641 C18orf8Q96DM3 657 aa23.17■■□□□ 1.3
SSBP4-203ENST00000593641 C1orf74Q96LT6 269 aa23.17■■□□□ 1.3
SSBP4-203ENST00000593641 BBC3Q96PG8 261 aaPredicted RBP23.17■■□□□ 1.3
SSBP4-203ENST00000593641 CALN1Q9BXU9 219 aa23.17■■□□□ 1.3
SSBP4-203ENST00000593641 FZD3Q9NPG1 666 aa23.17■■□□□ 1.3
SSBP4-203ENST00000593641 ANLNQ9NQW6 1124 aa23.17■■□□□ 1.3
SSBP4-203ENST00000593641 KLHL11Q9NVR0 708 aa23.17■■□□□ 1.3
SSBP4-203ENST00000593641 IL36AQ9UHA7 158 aa23.17■■□□□ 1.3
SSBP4-203ENST00000593641 GTF3C3Q9Y5Q9 886 aa23.17■■□□□ 1.3
SSBP4-203ENST00000593641 A0A0D9SEW6 157 aa23.16■■□□□ 1.3
SSBP4-203ENST00000593641 DRGXA6NNA5 263 aa23.16■■□□□ 1.3
SSBP4-203ENST00000593641 SMAD6O43541 496 aaKnown RBP23.16■■□□□ 1.3
SSBP4-203ENST00000593641 DGKAP23743 735 aa23.16■■□□□ 1.3
SSBP4-203ENST00000593641 SCNN1AP37088 669 aa23.16■■□□□ 1.3
SSBP4-203ENST00000593641 EIF2S3P41091 472 aaKnown RBP23.16■■□□□ 1.3
SSBP4-203ENST00000593641 UBE2HP62256 183 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms