RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 AP1M1Q9BXS5 423 aa9.87□□□□□ -0.83
DDX39A-220ENST00000593008 CARD9Q9H257 536 aa9.87□□□□□ -0.83
DDX39A-220ENST00000593008 SEMA4AQ9H3S1 761 aa9.87□□□□□ -0.83
DDX39A-220ENST00000593008 MTG2Q9H4K7 406 aa9.87□□□□□ -0.83
DDX39A-220ENST00000593008 DTLQ9NZJ0 730 aa9.87□□□□□ -0.83
DDX39A-220ENST00000593008 RCOR3Q9P2K3 495 aaPredicted RBP9.87□□□□□ -0.83
DDX39A-220ENST00000593008 GGA2Q9UJY4 613 aa9.87□□□□□ -0.83
DDX39A-220ENST00000593008 SMG5Q9UPR3 1016 aaKnown RBP9.87□□□□□ -0.83
DDX39A-220ENST00000593008 TBC1D30Q9Y2I9 924 aa9.87□□□□□ -0.83
DDX39A-220ENST00000593008 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.87□□□□□ -0.83
DDX39A-220ENST00000593008 ATG2BQ96BY7 2078 aa9.86□□□□□ -0.83
DDX39A-220ENST00000593008 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.86□□□□□ -0.83
DDX39A-220ENST00000593008 WASH4PA8MWX3 477 aa9.86□□□□□ -0.83
DDX39A-220ENST00000593008 F5H423 210 aaPredicted RBP9.86□□□□□ -0.83
DDX39A-220ENST00000593008 J3KR12 359 aa9.86□□□□□ -0.83
DDX39A-220ENST00000593008 K7ERQ8 282 aa9.86□□□□□ -0.83
DDX39A-220ENST00000593008 SGK1O00141 431 aa9.86□□□□□ -0.83
DDX39A-220ENST00000593008 RAMP2O60895 175 aa9.86□□□□□ -0.83
DDX39A-220ENST00000593008 CLDN11O75508 207 aa9.86□□□□□ -0.83
DDX39A-220ENST00000593008 APBB3O95704 486 aa9.86□□□□□ -0.83
DDX39A-220ENST00000593008 PABPC1P11940 636 aaKnown RBP9.86□□□□□ -0.83
DDX39A-220ENST00000593008 HNRNPLP14866 589 aaKnown RBP eCLIP9.86□□□□□ -0.83
DDX39A-220ENST00000593008 PTPRZ1P23471 2315 aaPredicted RBP9.86□□□□□ -0.83
DDX39A-220ENST00000593008 TNFRSF4P43489 277 aa9.86□□□□□ -0.83
DDX39A-220ENST00000593008 KIR2DL1P43626 348 aaPredicted RBP9.86□□□□□ -0.83
DDX39A-220ENST00000593008 HCAR3P49019 387 aa9.86□□□□□ -0.83
DDX39A-220ENST00000593008 DGKGP49619 791 aa9.86□□□□□ -0.83
DDX39A-220ENST00000593008 PAPOLAP51003 745 aaKnown RBP9.86□□□□□ -0.83
DDX39A-220ENST00000593008 ARF5P84085 180 aa9.86□□□□□ -0.83
DDX39A-220ENST00000593008 GNA12Q03113 381 aa9.86□□□□□ -0.83
DDX39A-220ENST00000593008 ZNF177Q13360 481 aaPredicted RBP9.86□□□□□ -0.83
DDX39A-220ENST00000593008 SNX1Q13596 522 aa9.86□□□□□ -0.83
DDX39A-220ENST00000593008 SIM2Q14190 667 aaPredicted RBP9.86□□□□□ -0.83
DDX39A-220ENST00000593008 PAFAH1B3Q15102 231 aaKnown RBP9.86□□□□□ -0.83
DDX39A-220ENST00000593008 ACBD5Q5T8D3 534 aaPredicted RBP9.86□□□□□ -0.83
DDX39A-220ENST00000593008 ANO7Q6IWH7 933 aa9.86□□□□□ -0.83
DDX39A-220ENST00000593008 TTC27Q6P3X3 843 aa9.86□□□□□ -0.83
DDX39A-220ENST00000593008 TMEM92Q6UXU6 159 aa9.86□□□□□ -0.83
DDX39A-220ENST00000593008 WDR5BQ86VZ2 330 aa9.86□□□□□ -0.83
DDX39A-220ENST00000593008 CREG2Q8IUH2 290 aa9.86□□□□□ -0.83
DDX39A-220ENST00000593008 RASGEF1CQ8N431 466 aa9.86□□□□□ -0.83
DDX39A-220ENST00000593008 ZNF513Q8N8E2 541 aaPredicted RBP9.86□□□□□ -0.83
DDX39A-220ENST00000593008 IL17RCQ8NAC3 791 aa9.86□□□□□ -0.83
DDX39A-220ENST00000593008 TSTD1Q8NFU3 115 aa9.86□□□□□ -0.83
DDX39A-220ENST00000593008 CCDC26Q8TAB7 109 aa9.86□□□□□ -0.83
DDX39A-220ENST00000593008 FIBINQ8TAL6 211 aa9.86□□□□□ -0.83
DDX39A-220ENST00000593008 ACTL9Q8TC94 416 aa9.86□□□□□ -0.83
DDX39A-220ENST00000593008 ARHGEF2Q92974 986 aaKnown RBP9.86□□□□□ -0.83
DDX39A-220ENST00000593008 OLFM3Q96PB7 478 aa9.86□□□□□ -0.83
DDX39A-220ENST00000593008 ACOX2Q99424 681 aa9.86□□□□□ -0.83
DDX39A-220ENST00000593008 LGMNQ99538 433 aa9.86□□□□□ -0.83
DDX39A-220ENST00000593008 MUC3BQ9H195 1237 aa9.86□□□□□ -0.83
DDX39A-220ENST00000593008 EPC1Q9H2F5 836 aa9.86□□□□□ -0.83
DDX39A-220ENST00000593008 CATSPERBQ9H7T0 1116 aa9.86□□□□□ -0.83
DDX39A-220ENST00000593008 VPS51Q9UID3 782 aa9.86□□□□□ -0.83
DDX39A-220ENST00000593008 VPS28Q9UK41 221 aa9.86□□□□□ -0.83
DDX39A-220ENST00000593008 INVSQ9Y283 1065 aa9.86□□□□□ -0.83
DDX39A-220ENST00000593008 EP300Q09472 2414 aaPredicted RBP9.86□□□□□ -0.83
DDX39A-220ENST00000593008 A0A0A0MRY4 1105 aa9.85□□□□□ -0.83
DDX39A-220ENST00000593008 TTC24A2A3L6 582 aaPredicted RBP9.85□□□□□ -0.83
DDX39A-220ENST00000593008 TYW5A2RUC4 315 aaKnown RBP9.85□□□□□ -0.83
DDX39A-220ENST00000593008 AXIN1O15169 862 aa9.85□□□□□ -0.83
DDX39A-220ENST00000593008 SMAD6O43541 496 aaKnown RBP9.85□□□□□ -0.83
DDX39A-220ENST00000593008 ZNF500O60304 480 aaPredicted RBP9.85□□□□□ -0.83
DDX39A-220ENST00000593008 ADAM23O75077 832 aa9.85□□□□□ -0.83
DDX39A-220ENST00000593008 ZMPSTE24O75844 475 aa9.85□□□□□ -0.83
DDX39A-220ENST00000593008 URI1O94763 535 aaPredicted RBP9.85□□□□□ -0.83
DDX39A-220ENST00000593008 CD160O95971 181 aa9.85□□□□□ -0.83
DDX39A-220ENST00000593008 PEX11BO96011 259 aa9.85□□□□□ -0.83
DDX39A-220ENST00000593008 MT-CO1P00395 513 aa9.85□□□□□ -0.83
DDX39A-220ENST00000593008 HOXA6P31267 233 aa9.85□□□□□ -0.83
DDX39A-220ENST00000593008 MAPKAPK2P49137 400 aa9.85□□□□□ -0.83
DDX39A-220ENST00000593008 DGKEP52429 567 aa9.85□□□□□ -0.83
DDX39A-220ENST00000593008 GDF10P55107 478 aa9.85□□□□□ -0.83
DDX39A-220ENST00000593008 MRPS21P82921 87 aaKnown RBP9.85□□□□□ -0.83
DDX39A-220ENST00000593008 C2orf54Q08AI8 447 aa9.85□□□□□ -0.83
DDX39A-220ENST00000593008 GALNT2Q10471 571 aa9.85□□□□□ -0.83
DDX39A-220ENST00000593008 ZBTB17Q13105 803 aa9.85□□□□□ -0.83
DDX39A-220ENST00000593008 E2F5Q15329 346 aa9.85□□□□□ -0.83
DDX39A-220ENST00000593008 CRY1Q16526 586 aa9.85□□□□□ -0.83
DDX39A-220ENST00000593008 LONRF2Q1L5Z9 754 aa9.85□□□□□ -0.83
DDX39A-220ENST00000593008 PLEKHG6Q3KR16 790 aa9.85□□□□□ -0.83
DDX39A-220ENST00000593008 PREPLQ4J6C6 727 aaPredicted RBP9.85□□□□□ -0.83
DDX39A-220ENST00000593008 MPP7Q5T2T1 576 aa9.85□□□□□ -0.83
DDX39A-220ENST00000593008 C6orf118Q5T5N4 469 aa9.85□□□□□ -0.83
DDX39A-220ENST00000593008 TTC39BQ5VTQ0 682 aaPredicted RBP9.85□□□□□ -0.83
DDX39A-220ENST00000593008 EGFLAMQ63HQ2 1017 aa9.85□□□□□ -0.83
DDX39A-220ENST00000593008 MBLAC2Q68D91 279 aa9.85□□□□□ -0.83
DDX39A-220ENST00000593008 CEP68Q76N32 757 aa9.85□□□□□ -0.83
DDX39A-220ENST00000593008 ZC3H18Q86VM9 953 aaKnown RBP9.85□□□□□ -0.83
DDX39A-220ENST00000593008 ZNF354CQ86Y25 554 aa9.85□□□□□ -0.83
DDX39A-220ENST00000593008 MAP7D3Q8IWC1 876 aa9.85□□□□□ -0.83
DDX39A-220ENST00000593008 UMODL1-AS1Q8N2C9 162 aa9.85□□□□□ -0.83
DDX39A-220ENST00000593008 TAB3Q8N5C8 712 aaPredicted RBP9.85□□□□□ -0.83
DDX39A-220ENST00000593008 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.85□□□□□ -0.834e-10■■■■□ 21.2
DDX39A-220ENST00000593008 PRELID2Q8N945 189 aa9.85□□□□□ -0.83
DDX39A-220ENST00000593008 RPL10LQ96L21 214 aaKnown RBP9.85□□□□□ -0.83
DDX39A-220ENST00000593008 FEM1AQ9BSK4 669 aa9.85□□□□□ -0.83
DDX39A-220ENST00000593008 TPSD1Q9BZJ3 242 aa9.85□□□□□ -0.83
DDX39A-220ENST00000593008 CIPCQ9C0C6 399 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms