RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.19□□□□□ -0.46
DDX39A-219ENST00000592927 E9PAM4 449 aa12.19□□□□□ -0.46
DDX39A-219ENST00000592927 HYAL3O43820 417 aaPredicted RBP12.19□□□□□ -0.46
DDX39A-219ENST00000592927 CACNG3O60359 315 aa12.19□□□□□ -0.46
DDX39A-219ENST00000592927 CEACAM1P13688 526 aa12.19□□□□□ -0.46
DDX39A-219ENST00000592927 ZFXP17010 805 aaPredicted RBP12.19□□□□□ -0.46
DDX39A-219ENST00000592927 HOXD9P28356 352 aaPredicted RBP12.19□□□□□ -0.46
DDX39A-219ENST00000592927 L1CAMP32004 1257 aa12.19□□□□□ -0.46
DDX39A-219ENST00000592927 MPLP40238 635 aa12.19□□□□□ -0.46
DDX39A-219ENST00000592927 EIF2DP41214 584 aaKnown RBP12.19□□□□□ -0.46
DDX39A-219ENST00000592927 NRG1Q02297 640 aaPredicted RBP12.19□□□□□ -0.46
DDX39A-219ENST00000592927 DPYSL3Q14195 570 aa12.19□□□□□ -0.46
DDX39A-219ENST00000592927 SIX1Q15475 284 aaPredicted RBP12.19□□□□□ -0.46
DDX39A-219ENST00000592927 ELF2Q15723 593 aa12.19□□□□□ -0.46
DDX39A-219ENST00000592927 CCNG2Q16589 344 aa12.19□□□□□ -0.46
DDX39A-219ENST00000592927 GAB4Q2WGN9 574 aa12.19□□□□□ -0.46
DDX39A-219ENST00000592927 PREPLQ4J6C6 727 aaPredicted RBP12.19□□□□□ -0.46
DDX39A-219ENST00000592927 BBS12Q6ZW61 710 aa12.19□□□□□ -0.46
DDX39A-219ENST00000592927 WDR5BQ86VZ2 330 aa12.19□□□□□ -0.46
DDX39A-219ENST00000592927 PROSER1Q86XN7 944 aa12.19□□□□□ -0.46
DDX39A-219ENST00000592927 PYROXD2Q8N2H3 581 aa12.19□□□□□ -0.46
DDX39A-219ENST00000592927 PRELID2Q8N945 189 aa12.19□□□□□ -0.46
DDX39A-219ENST00000592927 IGSF8Q969P0 613 aa12.19□□□□□ -0.46
DDX39A-219ENST00000592927 FAF2Q96CS3 445 aa12.19□□□□□ -0.46
DDX39A-219ENST00000592927 MYEOVQ96EZ4 313 aa12.19□□□□□ -0.46
DDX39A-219ENST00000592927 EPAS1Q99814 870 aa12.19□□□□□ -0.46
DDX39A-219ENST00000592927 P2RY13Q9BPV8 354 aa12.19□□□□□ -0.46
DDX39A-219ENST00000592927 EDEM2Q9BV94 578 aa12.19□□□□□ -0.46
DDX39A-219ENST00000592927 CALN1Q9BXU9 219 aa12.19□□□□□ -0.46
DDX39A-219ENST00000592927 SLC2A11Q9BYW1 496 aa12.19□□□□□ -0.46
DDX39A-219ENST00000592927 PCDH18Q9HCL0 1135 aa12.19□□□□□ -0.46
DDX39A-219ENST00000592927 VPS45Q9NRW7 570 aa12.19□□□□□ -0.46
DDX39A-219ENST00000592927 DNAJC17Q9NVM6 304 aaKnown RBP12.19□□□□□ -0.46
DDX39A-219ENST00000592927 KLHL11Q9NVR0 708 aa12.19□□□□□ -0.46
DDX39A-219ENST00000592927 GPATCH2LQ9NWQ4 482 aa12.19□□□□□ -0.46
DDX39A-219ENST00000592927 DEC1Q9P2X7 70 aa12.19□□□□□ -0.46
DDX39A-219ENST00000592927 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.19□□□□□ -0.46
DDX39A-219ENST00000592927 PCYOX1Q9UHG3 505 aa12.19□□□□□ -0.46
DDX39A-219ENST00000592927 MSRB2Q9Y3D2 182 aa12.19□□□□□ -0.46
DDX39A-219ENST00000592927 V9GYY5 206 aaPredicted RBP12.19□□□□□ -0.46
DDX39A-219ENST00000592927 KIF26AQ9ULI4 1882 aaPredicted RBP12.19□□□□□ -0.46
DDX39A-219ENST00000592927 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.18□□□□□ -0.46
DDX39A-219ENST00000592927 FAM187AA6NFU0 413 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 DRGXA6NNA5 263 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 FAM72CH0Y354 149 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 CREB3O43889 395 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 TULP3O75386 442 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 CLDN11O75508 207 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 LRIG2O94898 1065 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 PAPSS2O95340 614 aaPredicted RBP12.18□□□□□ -0.46
DDX39A-219ENST00000592927 HTR7P34969 479 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 ARL4AP40617 200 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 OPRD1P41143 372 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 SLC6A11P48066 632 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 GALK1P51570 392 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 ZNF177Q13360 481 aaPredicted RBP12.18□□□□□ -0.46
DDX39A-219ENST00000592927 CDH18Q13634 790 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 C5orf22Q49AR2 442 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 PPP6R3Q5H9R7 873 aaPredicted RBP12.18□□□□□ -0.46
DDX39A-219ENST00000592927 FAM72AQ5TYM5 149 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 KAZNQ674X7 775 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 GRAMD4Q6IC98 578 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 FAM72DQ6L9T8 149 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 RWDD4Q6NW29 188 aaKnown RBP12.18□□□□□ -0.46
DDX39A-219ENST00000592927 WDR93Q6P2C0 686 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 DRICH1Q6PGQ1 229 aaPredicted RBP12.18□□□□□ -0.46
DDX39A-219ENST00000592927 TXNDC11Q6PKC3 985 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 C12orf40Q86WS4 652 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 FAM72BQ86X60 149 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 CIR1Q86X95 450 aaPredicted RBP12.18□□□□□ -0.46
DDX39A-219ENST00000592927 MFN1Q8IWA4 741 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 KLHL7Q8IXQ5 586 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 ETFBKMTQ8IXQ9 262 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 ZNF683Q8IZ20 524 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 CARNMT1Q8N4J0 409 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 ZNF557Q8N988 423 aaPredicted RBP12.18□□□□□ -0.46
DDX39A-219ENST00000592927 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.18□□□□□ -0.46
DDX39A-219ENST00000592927 GRK7Q8WTQ7 553 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 TSC1Q92574 1164 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 SLCO2A1Q92959 643 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 MAGOHBQ96A72 148 aaKnown RBP12.18□□□□□ -0.46
DDX39A-219ENST00000592927 TBC1D31Q96DN5 1066 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 CHFRQ96EP1 664 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 P2RY11Q96G91 374 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 RNF157Q96PX1 679 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 PNKPQ96T60 521 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 LRRC1Q9BTT6 524 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 HEMGNQ9BXL5 484 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 MAGEB5Q9BZ81 275 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 ZYG11BQ9C0D3 744 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 DDX47Q9H0S4 455 aaKnown RBP12.18□□□□□ -0.46
DDX39A-219ENST00000592927 C2orf42Q9NWW7 574 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 PPARGC1AQ9UBK2 798 aaKnown RBP12.18□□□□□ -0.46
DDX39A-219ENST00000592927 KLK13Q9UKR3 277 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 PCDHGA5Q9Y5G8 931 aa12.18□□□□□ -0.46
DDX39A-219ENST00000592927 LAMA5O15230 3695 aa12.17□□□□□ -0.46
DDX39A-219ENST00000592927 IGLV3-10A0A075B6K4 115 aa12.17□□□□□ -0.46
DDX39A-219ENST00000592927 A0A1B0GVM2 712 aa12.17□□□□□ -0.46
DDX39A-219ENST00000592927 TCRBV7S2A1N4TA0A589 114 aa12.17□□□□□ -0.46
DDX39A-219ENST00000592927 TCAF2A6NFQ2 919 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms