RNA–Protein interactions for RNA: ENST00000592621.5

RANBP3-228, Transcript of RAN binding protein 3, human

TSL 5

Gene RANBP3, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RANBP3-228	ENST00000592621	DAAM2	Q86T65	1068 aa		11.93	□□□□□ -0.5
RANBP3-228	ENST00000592621	METTL3	Q86U44	580 aa	Known RBP	11.93	□□□□□ -0.5
RANBP3-228	ENST00000592621	TXLNB	Q8N3L3	684 aa		11.93	□□□□□ -0.5
RANBP3-228	ENST00000592621	LZTR1	Q8N653	840 aa		11.93	□□□□□ -0.5
RANBP3-228	ENST00000592621	PQLC3	Q8N755	202 aa		11.93	□□□□□ -0.5
RANBP3-228	ENST00000592621	ATP11C	Q8NB49	1132 aa		11.93	□□□□□ -0.5
RANBP3-228	ENST00000592621	NETO2	Q8NC67	525 aa		11.93	□□□□□ -0.5
RANBP3-228	ENST00000592621	KCTD6	Q8NC69	237 aa		11.93	□□□□□ -0.5
RANBP3-228	ENST00000592621	VOPP1	Q96AW1	172 aa		11.93	□□□□□ -0.5
RANBP3-228	ENST00000592621	CELF6	Q96J87	481 aa	Known RBP	11.93	□□□□□ -0.5
RANBP3-228	ENST00000592621	FAM129B	Q96TA1	746 aa		11.93	□□□□□ -0.5
RANBP3-228	ENST00000592621	PHOX2B	Q99453	314 aa		11.93	□□□□□ -0.5
RANBP3-228	ENST00000592621	RSPH9	Q9H1X1	276 aa	Predicted RBP	11.93	□□□□□ -0.5
RANBP3-228	ENST00000592621	FBRS	Q9HAH7	460 aa		11.93	□□□□□ -0.5
RANBP3-228	ENST00000592621	CD93	Q9NPY3	652 aa		11.93	□□□□□ -0.5
RANBP3-228	ENST00000592621	MYO18A	Q92614	2054 aa	Known RBP	11.92	□□□□□ -0.5
RANBP3-228	ENST00000592621	CTNNA1	P35221	906 aa	Known RBP	11.92	□□□□□ -0.5
RANBP3-228	ENST00000592621	P2RY2	P41231	377 aa		11.92	□□□□□ -0.5
RANBP3-228	ENST00000592621	MARCKSL1	P49006	195 aa		11.92	□□□□□ -0.5
RANBP3-228	ENST00000592621	PAPOLA	P51003	745 aa	Known RBP	11.92	□□□□□ -0.5
RANBP3-228	ENST00000592621	RPS14	P62263	151 aa	Known RBP	11.92	□□□□□ -0.5
RANBP3-228	ENST00000592621	PAFAH1B3	Q15102	231 aa	Known RBP	11.92	□□□□□ -0.5
RANBP3-228	ENST00000592621	MAP7D1	Q3KQU3	841 aa		11.92	□□□□□ -0.5
RANBP3-228	ENST00000592621	INO80D	Q53TQ3	878 aa	Predicted RBP	11.92	□□□□□ -0.5
RANBP3-228	ENST00000592621	C22orf39	Q6P5X5	142 aa		11.92	□□□□□ -0.5
RANBP3-228	ENST00000592621	ZC3H14	Q6PJT7	736 aa	Known RBP	11.92	□□□□□ -0.5
RANBP3-228	ENST00000592621	TMCO3	Q6UWJ1	677 aa		11.92	□□□□□ -0.5
RANBP3-228	ENST00000592621		Q6ZVU0	165 aa		11.92	□□□□□ -0.5
RANBP3-228	ENST00000592621	TMPRSS6	Q8IU80	811 aa		11.92	□□□□□ -0.5
RANBP3-228	ENST00000592621	MAP7D3	Q8IWC1	876 aa		11.92	□□□□□ -0.5
RANBP3-228	ENST00000592621	OR2A12	Q8NGT7	310 aa		11.92	□□□□□ -0.5
RANBP3-228	ENST00000592621	GAB3	Q8WWW8	586 aa		11.92	□□□□□ -0.5
RANBP3-228	ENST00000592621	KRT35	Q92764	455 aa		11.92	□□□□□ -0.5
RANBP3-228	ENST00000592621	ISG20	Q96AZ6	181 aa	Known RBP	11.92	□□□□□ -0.5
RANBP3-228	ENST00000592621	RNF157	Q96PX1	679 aa		11.92	□□□□□ -0.5
RANBP3-228	ENST00000592621	CALN1	Q9BXU9	219 aa		11.92	□□□□□ -0.5
RANBP3-228	ENST00000592621	CEP44	Q9C0F1	390 aa		11.92	□□□□□ -0.5
RANBP3-228	ENST00000592621	EPC1	Q9H2F5	836 aa		11.92	□□□□□ -0.5
RANBP3-228	ENST00000592621	KCNF1	Q9H3M0	494 aa		11.92	□□□□□ -0.5
RANBP3-228	ENST00000592621	PRDM16	Q9HAZ2	1276 aa		11.92	□□□□□ -0.5
RANBP3-228	ENST00000592621	DDX56	Q9NY93	547 aa	Known RBP	11.92	□□□□□ -0.5
RANBP3-228	ENST00000592621	USP36	Q9P275	1121 aa	Known RBP	11.92	□□□□□ -0.5
RANBP3-228	ENST00000592621	CAPN6	Q9Y6Q1	641 aa		11.92	□□□□□ -0.5
RANBP3-228	ENST00000592621	MACROD2	A1Z1Q3	448 aa		11.91	□□□□□ -0.5
RANBP3-228	ENST00000592621	LRRD1	A4D1F6	860 aa		11.91	□□□□□ -0.5
RANBP3-228	ENST00000592621	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	11.91	□□□□□ -0.5
RANBP3-228	ENST00000592621	ARHGAP42	A6NI28	874 aa		11.91	□□□□□ -0.5
RANBP3-228	ENST00000592621		J3KR12	359 aa		11.91	□□□□□ -0.5
RANBP3-228	ENST00000592621	MFSD11	O43934	449 aa		11.91	□□□□□ -0.5
RANBP3-228	ENST00000592621	PRAMEF11	O60813	436 aa		11.91	□□□□□ -0.5
RANBP3-228	ENST00000592621	IGLV3-19	P01714	112 aa		11.91	□□□□□ -0.5
RANBP3-228	ENST00000592621	KRT1	P04264	644 aa		11.91	□□□□□ -0.5
RANBP3-228	ENST00000592621	GEMIN4	P57678	1058 aa	Known RBP	11.91	□□□□□ -0.5
RANBP3-228	ENST00000592621	ELAVL3	Q14576	367 aa	Known RBP	11.91	□□□□□ -0.5
RANBP3-228	ENST00000592621	SLC9A4	Q6AI14	798 aa		11.91	□□□□□ -0.5
RANBP3-228	ENST00000592621	MFSD7	Q6UXD7	560 aa		11.91	□□□□□ -0.5
RANBP3-228	ENST00000592621	LEKR1	Q6ZMV7	388 aa		11.91	□□□□□ -0.5
RANBP3-228	ENST00000592621	ARHGAP36	Q6ZRI8	547 aa		11.91	□□□□□ -0.5
RANBP3-228	ENST00000592621	NT5DC3	Q86UY8	548 aa		11.91	□□□□□ -0.5
RANBP3-228	ENST00000592621	KATNAL2	Q8IYT4	538 aa		11.91	□□□□□ -0.5
RANBP3-228	ENST00000592621	STK40	Q8N2I9	435 aa		11.91	□□□□□ -0.5
RANBP3-228	ENST00000592621	RNF10	Q8N5U6	811 aa	Known RBP	11.91	□□□□□ -0.5
RANBP3-228	ENST00000592621	FRMD1	Q8N878	549 aa		11.91	□□□□□ -0.5
RANBP3-228	ENST00000592621	SUMF1	Q8NBK3	374 aa		11.91	□□□□□ -0.5
RANBP3-228	ENST00000592621	KIAA1524	Q8TCG1	905 aa		11.91	□□□□□ -0.5
RANBP3-228	ENST00000592621	CASKIN2	Q8WXE0	1202 aa		11.91	□□□□□ -0.5
RANBP3-228	ENST00000592621	PRCC	Q92733	491 aa	Predicted RBP	11.91	□□□□□ -0.5
RANBP3-228	ENST00000592621	SIPA1	Q96FS4	1042 aa		11.91	□□□□□ -0.5
RANBP3-228	ENST00000592621	ITM2C	Q9NQX7	267 aa		11.91	□□□□□ -0.5
RANBP3-228	ENST00000592621	BCCIP	Q9P287	314 aa	Known RBP eCLIP	11.91	□□□□□ -0.5
RANBP3-228	ENST00000592621	MBD1	Q9UIS9	605 aa	Predicted RBP	11.91	□□□□□ -0.5
RANBP3-228	ENST00000592621	HPCAL4	Q9UM19	191 aa		11.91	□□□□□ -0.5
RANBP3-228	ENST00000592621	FCF1	Q9Y324	198 aa	Known RBP	11.91	□□□□□ -0.5
RANBP3-228	ENST00000592621	PCDHA3	Q9Y5H8	950 aa		11.91	□□□□□ -0.5
RANBP3-228	ENST00000592621	PLXND1	Q9Y4D7	1925 aa		11.91	□□□□□ -0.5
RANBP3-228	ENST00000592621	IGHV1OR15-9	A0A0B4J2B8	117 aa		11.9	□□□□□ -0.5
RANBP3-228	ENST00000592621	RNF103	O00237	685 aa		11.9	□□□□□ -0.5
RANBP3-228	ENST00000592621	MCF2L	O15068	1137 aa		11.9	□□□□□ -0.5
RANBP3-228	ENST00000592621	ALOX15B	O15296	676 aa		11.9	□□□□□ -0.5
RANBP3-228	ENST00000592621	KRT86	O43790	486 aa		11.9	□□□□□ -0.5
RANBP3-228	ENST00000592621	MAFK	O60675	156 aa		11.9	□□□□□ -0.5
RANBP3-228	ENST00000592621	ZNF217	O75362	1048 aa		11.9	□□□□□ -0.5
RANBP3-228	ENST00000592621	PALM	O75781	387 aa		11.9	□□□□□ -0.5
RANBP3-228	ENST00000592621	RPP40	O75818	363 aa	Known RBP	11.9	□□□□□ -0.5
RANBP3-228	ENST00000592621	TMCC1	O94876	653 aa		11.9	□□□□□ -0.5
RANBP3-228	ENST00000592621	PEX11B	O96011	259 aa		11.9	□□□□□ -0.5
RANBP3-228	ENST00000592621	CTSL	P07711	333 aa		11.9	□□□□□ -0.5
RANBP3-228	ENST00000592621	CCDC175	P0C221	793 aa		11.9	□□□□□ -0.5
RANBP3-228	ENST00000592621	TNNT1	P13805	278 aa		11.9	□□□□□ -0.5
RANBP3-228	ENST00000592621	CTNNA2	P26232	953 aa		11.9	□□□□□ -0.5
RANBP3-228	ENST00000592621	SERPINB6	P35237	376 aa		11.9	□□□□□ -0.5
RANBP3-228	ENST00000592621	CDKN2B	P42772	138 aa		11.9	□□□□□ -0.5
RANBP3-228	ENST00000592621	PEX5	P50542	639 aa		11.9	□□□□□ -0.5
RANBP3-228	ENST00000592621	NAP1L1	P55209	391 aa	Known RBP	11.9	□□□□□ -0.5
RANBP3-228	ENST00000592621	ZBTB16	Q05516	673 aa		11.9	□□□□□ -0.5
RANBP3-228	ENST00000592621	IL10RB	Q08334	325 aa		11.9	□□□□□ -0.5
RANBP3-228	ENST00000592621	SLC10A2	Q12908	348 aa	Predicted RBP	11.9	□□□□□ -0.5
RANBP3-228	ENST00000592621	CYTH1	Q15438	398 aa		11.9	□□□□□ -0.5
RANBP3-228	ENST00000592621	IFI16	Q16666	785 aa	Known RBP	11.9	□□□□□ -0.5
RANBP3-228	ENST00000592621	ACCSL	Q4AC99	568 aa		11.9	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms