RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 GRIA4P48058 902 aa15.12■□□□□ 0.01
SMARCA4-219ENST00000592604 ZNF410Q86VK4 478 aa15.12■□□□□ 0.01
SMARCA4-219ENST00000592604 FBXO16Q8IX29 292 aaPredicted RBP15.12■□□□□ 0.01
SMARCA4-219ENST00000592604 CNTD1Q8N815 330 aa15.12■□□□□ 0.01
SMARCA4-219ENST00000592604 TMEM102Q8N9M5 508 aaPredicted RBP15.12■□□□□ 0.01
SMARCA4-219ENST00000592604 ACVR1CQ8NER5 493 aa15.12■□□□□ 0.01
SMARCA4-219ENST00000592604 MFSD3Q96ES6 412 aa15.12■□□□□ 0.01
SMARCA4-219ENST00000592604 CNBD2Q96M20 576 aa15.12■□□□□ 0.01
SMARCA4-219ENST00000592604 ZMAT2Q96NC0 199 aaKnown RBP15.12■□□□□ 0.01
SMARCA4-219ENST00000592604 ZBTB26Q9HCK0 441 aa15.12■□□□□ 0.01
SMARCA4-219ENST00000592604 KLHL8Q9P2G9 620 aaPredicted RBP15.12■□□□□ 0.01
SMARCA4-219ENST00000592604 ZDHHC2Q9UIJ5 367 aa15.12■□□□□ 0.01
SMARCA4-219ENST00000592604 AMHP03971 560 aa15.11■□□□□ 0.01
SMARCA4-219ENST00000592604 PKNOX1P55347 436 aa15.11■□□□□ 0.01
SMARCA4-219ENST00000592604 ADRM1Q16186 407 aa15.11■□□□□ 0.01
SMARCA4-219ENST00000592604 KCNMB4Q86W47 210 aa15.11■□□□□ 0.01
SMARCA4-219ENST00000592604 SDR16C5Q8N3Y7 309 aa15.11■□□□□ 0.01
SMARCA4-219ENST00000592604 PDCD6IPQ8WUM4 868 aaKnown RBP15.11■□□□□ 0.01
SMARCA4-219ENST00000592604 IRGQQ8WZA9 623 aa15.11■□□□□ 0.01
SMARCA4-219ENST00000592604 NUF2Q9BZD4 464 aa15.11■□□□□ 0.01
SMARCA4-219ENST00000592604 PDGFDQ9GZP0 370 aaPredicted RBP15.11■□□□□ 0.01
SMARCA4-219ENST00000592604 PIM2Q9P1W9 311 aa15.11■□□□□ 0.01
SMARCA4-219ENST00000592604 CDYLQ9Y232 598 aa15.11■□□□□ 0.01
SMARCA4-219ENST00000592604 RALGAPA2Q2PPJ7 1873 aa15.11■□□□□ 0.01
SMARCA4-219ENST00000592604 KCNK1O00180 336 aa15.11■□□□□ 0.01
SMARCA4-219ENST00000592604 HCRTO43612 131 aa15.11■□□□□ 0.01
SMARCA4-219ENST00000592604 USP12O75317 370 aa15.11■□□□□ 0.01
SMARCA4-219ENST00000592604 DAB1O75553 588 aa15.11■□□□□ 0.01
SMARCA4-219ENST00000592604 F7P08709 466 aaPredicted RBP15.11■□□□□ 0.01
SMARCA4-219ENST00000592604 NPY2RP49146 381 aa15.11■□□□□ 0.01
SMARCA4-219ENST00000592604 INHBCP55103 352 aa15.11■□□□□ 0.01
SMARCA4-219ENST00000592604 CDKL1Q00532 357 aa15.11■□□□□ 0.01
SMARCA4-219ENST00000592604 GK3PQ14409 553 aa15.11■□□□□ 0.01
SMARCA4-219ENST00000592604 ANO4Q32M45 955 aa15.11■□□□□ 0.01
SMARCA4-219ENST00000592604 TP53INP2Q8IXH6 220 aa15.11■□□□□ 0.01
SMARCA4-219ENST00000592604 MOCOSQ96EN8 888 aa15.11■□□□□ 0.01
SMARCA4-219ENST00000592604 GPR22Q99680 433 aa15.11■□□□□ 0.01
SMARCA4-219ENST00000592604 GRIP2Q9C0E4 1043 aa15.11■□□□□ 0.01
SMARCA4-219ENST00000592604 TMPRSS4Q9NRS4 437 aa15.11■□□□□ 0.01
SMARCA4-219ENST00000592604 APPL1Q9UKG1 709 aa15.11■□□□□ 0.01
SMARCA4-219ENST00000592604 ARHGAP10A1A4S6 786 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 H0YJX3 145 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 CFLARO15519 480 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 ENO3P13929 434 aaPredicted RBP15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 CYP2B6P20813 491 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 MSX2P35548 267 aaPredicted RBP15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 ABCG1P45844 678 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 NR1H2P55055 460 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 SH2D4BQ5SQS7 431 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 LSMEM2Q8N112 164 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 DNAAF3Q8N9W5 541 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 NPY6RQ99463 290 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 PRPF18Q99633 342 aaKnown RBP15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 TASP1Q9H6P5 420 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 SETD4Q9NVD3 440 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 HES2Q9Y543 173 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 RAD54BQ9Y620 910 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 DNAJC25-GNG10A0A024R161 153 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 TARM1B6A8C7 271 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 TK2O00142 265 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 CNMDO75829 334 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 CYP2C9P11712 490 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 DNAJB1P25685 340 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 ART3Q13508 389 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 IYDQ6PHW0 289 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 RBM12BQ8IXT5 1001 aaKnown RBP15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 STYXQ8WUJ0 223 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 USP13Q92995 863 aaPredicted RBP15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 KLHL32Q96NJ5 620 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 CATSPER2Q96P56 530 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 C20orf96Q9NUD7 363 aaPredicted RBP15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 SUN2Q9UH99 717 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 TLK1Q9UKI8 766 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 GJA3Q9Y6H8 435 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 TCAF2A6NFQ2 919 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 NFKBIEO00221 500 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 EEF2KO00418 725 aaKnown RBP15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 DDHD2O94830 711 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 SLC25A27O95847 323 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 PDGFRBP09619 1106 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 ZNF26P17031 533 aaPredicted RBP15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 NOS2P35228 1153 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 CCR10P46092 362 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 NAGLUP54802 743 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 PITX1P78337 314 aaPredicted RBP15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 DCAF4L1Q3SXM0 396 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 CERCAMQ5T4B2 595 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 C6orf52Q5T4I8 152 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 TMEM198Q66K66 360 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 NLRP7Q8WX94 980 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 PPP1R36Q96LQ0 422 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 IARS2Q9NSE4 1012 aaKnown RBP15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 TUBGCP4Q9UGJ1 667 aa15.1■□□□□ 0.01
SMARCA4-219ENST00000592604 SRCAPQ6ZRS2 3230 aa15.09■□□□□ 0.01
SMARCA4-219ENST00000592604 HSPA1AP0DMV8 641 aaKnown RBP15.09■□□□□ 0.01
SMARCA4-219ENST00000592604 HSPA1BP0DMV9 641 aaKnown RBP15.09■□□□□ 0.01
SMARCA4-219ENST00000592604 ATP6V1B1P15313 513 aa15.09■□□□□ 0.01
SMARCA4-219ENST00000592604 LMO2P25791 158 aa15.09■□□□□ 0.01
SMARCA4-219ENST00000592604 GNL1P36915 607 aaPredicted RBP15.09■□□□□ 0.01
SMARCA4-219ENST00000592604 PSMD8P48556 350 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms