RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 TMEM26Q6ZUK4 368 aa13.51□□□□□ -0.25
SMARCA4-216ENST00000591545 PTAR1Q7Z6K3 402 aaPredicted RBP13.51□□□□□ -0.25
SMARCA4-216ENST00000591545 HTR3CQ8WXA8 447 aa13.51□□□□□ -0.25
SMARCA4-216ENST00000591545 APOL4Q9BPW4 351 aa13.51□□□□□ -0.25
SMARCA4-216ENST00000591545 ELOVL6Q9H5J4 265 aa13.51□□□□□ -0.25
SMARCA4-216ENST00000591545 SLC27A5Q9Y2P5 690 aa13.51□□□□□ -0.25
SMARCA4-216ENST00000591545 TPRKBQ9Y3C4 175 aa13.51□□□□□ -0.25
SMARCA4-216ENST00000591545 RIPK3Q9Y572 518 aa13.51□□□□□ -0.25
SMARCA4-216ENST00000591545 MED26O95402 600 aa13.51□□□□□ -0.25
SMARCA4-216ENST00000591545 ARF4P18085 180 aaPredicted RBP13.51□□□□□ -0.25
SMARCA4-216ENST00000591545 EPS8Q12929 822 aa13.51□□□□□ -0.25
SMARCA4-216ENST00000591545 TRAF2Q12933 501 aa13.51□□□□□ -0.25
SMARCA4-216ENST00000591545 ANKRD52Q8NB46 1076 aa13.51□□□□□ -0.25
SMARCA4-216ENST00000591545 MAGEB10Q96LZ2 347 aaPredicted RBP13.51□□□□□ -0.25
SMARCA4-216ENST00000591545 SLC25A23Q9BV35 468 aa13.51□□□□□ -0.25
SMARCA4-216ENST00000591545 PCDHA2Q9Y5H9 948 aa13.51□□□□□ -0.25
SMARCA4-216ENST00000591545 A0A087WXM4 84 aa13.51□□□□□ -0.25
SMARCA4-216ENST00000591545 VAC14Q08AM6 782 aa13.51□□□□□ -0.25
SMARCA4-216ENST00000591545 BMPR2Q13873 1038 aa13.51□□□□□ -0.25
SMARCA4-216ENST00000591545 C19orf18Q8NEA5 215 aa13.51□□□□□ -0.25
SMARCA4-216ENST00000591545 AHSPQ9NZD4 102 aa13.51□□□□□ -0.25
SMARCA4-216ENST00000591545 NDUFAF1Q9Y375 327 aa13.51□□□□□ -0.25
SMARCA4-216ENST00000591545 FAM220BPB1ANY3 271 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 SMIM22K7EJ46 135 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 LGR5O75473 907 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 GJB1P08034 283 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 ST13P50502 369 aaKnown RBP13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 CDC16Q13042 620 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 DDR2Q16832 855 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 RAP1GAP2Q684P5 730 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 PSRC1Q6PGN9 363 aaPredicted RBP13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 GLT6D1Q7Z4J2 308 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 PIGZQ86VD9 579 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 ZNF398Q8TD17 642 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 TRIM63Q969Q1 353 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 PCDHGC5Q9Y5F6 944 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 MAP2K7O14733 419 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 CLOCKO15516 846 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 ZNF682O95780 498 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 CYP1A1P04798 512 aaPredicted RBP13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 NUP62P37198 522 aaPredicted RBP13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 ALDH6A1Q02252 535 aaKnown RBP13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 ITGB3BPQ13352 177 aaPredicted RBP13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 ZC3H12AQ5D1E8 599 aaKnown RBP13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 EEF1DP3Q658K8 133 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 SYTL1Q8IYJ3 562 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 STARD8Q92502 1023 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 ZNF75CPQ92670 426 aaPredicted RBP13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 C12orf42Q96LP6 360 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 HSD17B14Q9BPX1 270 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 C11orf49Q9H6J7 331 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 CACNA2D2Q9NY47 1150 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 ASTN2O75129 1339 aaPredicted RBP13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 ZSCAN5CA6NGD5 496 aaPredicted RBP13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 TREHO43280 583 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 ZNF862O60290 1169 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 FGRP09769 529 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 POU6F1Q14863 301 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 NR6A1Q15406 480 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 DOK6Q6PKX4 331 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 FGD2Q7Z6J4 655 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 KATNAL2Q8IYT4 538 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 MREGQ8N565 214 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 DPY30Q9C005 99 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 AASDHPPTQ9NRN7 309 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 SRRDQ9UH36 339 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 HPGDP15428 266 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 PECAM1P16284 738 aaPredicted RBP13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 CCNG1P51959 295 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 ITGA1P56199 1179 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 RRP1BQ14684 758 aaKnown RBP13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 WDR59Q6PJI9 974 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 CHPFQ8IZ52 775 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 ZCCHC7Q8N3Z6 543 aaKnown RBP13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 OR6Y1Q8NGX8 325 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 ETNPPLQ8TBG4 499 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 MIR1-1HGQ9H1L0 117 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 OR12D3Q9UGF7 316 aa13.5□□□□□ -0.25
SMARCA4-216ENST00000591545 NCF1BA6NI72 391 aaPredicted RBP13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 LRRC10BA6NIK2 292 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 NCF1CA8MVU1 366 aaPredicted RBP13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 TISP43B9A030 160 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 MRASO14807 208 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 CD3EAPO15446 510 aaKnown RBP13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 B4GALT5O43286 388 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 RARAP10276 462 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 NCF1P14598 390 aaPredicted RBP13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 PPP2R1BP30154 601 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 MAGEA10P43363 369 aaPredicted RBP13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 APLP1P51693 650 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 SLC16A1P53985 500 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 IL5RAQ01344 420 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 FASTKQ14296 549 aaKnown RBP13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 DENND1CQ8IV53 801 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 CROCCP3Q8IVE0 287 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 ST13P5Q8NFI4 369 aaPredicted RBP13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 MCOLN3Q8TDD5 553 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 ZNF184Q99676 751 aaPredicted RBP13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 RPL26L1Q9UNX3 145 aaKnown RBP13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 LTBP3Q9NS15 1303 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms