RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 KRT5P13647 590 aa16.32■□□□□ 0.2
DDX39A-216ENST00000591275 HNRNPA2B1P22626 353 aaKnown RBP16.32■□□□□ 0.2
DDX39A-216ENST00000591275 VASPP50552 380 aaPredicted RBP16.32■□□□□ 0.2
DDX39A-216ENST00000591275 PTPN13Q12923 2485 aa16.32■□□□□ 0.2
DDX39A-216ENST00000591275 ZNF177Q13360 481 aaPredicted RBP16.32■□□□□ 0.2
DDX39A-216ENST00000591275 EIF4EBP2Q13542 120 aaPredicted RBP16.32■□□□□ 0.2
DDX39A-216ENST00000591275 ZNF658Q5TYW1 1059 aaPredicted RBP16.32■□□□□ 0.2
DDX39A-216ENST00000591275 KIAA1614Q5VZ46 1190 aa16.32■□□□□ 0.2
DDX39A-216ENST00000591275 SEL1L3Q68CR1 1132 aa16.32■□□□□ 0.2
DDX39A-216ENST00000591275 OR6B2Q6IFH4 312 aa16.32■□□□□ 0.2
DDX39A-216ENST00000591275 LMO3Q8TAP4 145 aa16.32■□□□□ 0.2
DDX39A-216ENST00000591275 IFI44Q8TCB0 444 aa16.32■□□□□ 0.2
DDX39A-216ENST00000591275 SLC4A5Q9BY07 1137 aa16.32■□□□□ 0.2
DDX39A-216ENST00000591275 METTL14Q9HCE5 456 aaKnown RBP16.32■□□□□ 0.2
DDX39A-216ENST00000591275 DDIT4Q9NX09 232 aa16.32■□□□□ 0.2
DDX39A-216ENST00000591275 VANGL2Q9ULK5 521 aa16.32■□□□□ 0.2
DDX39A-216ENST00000591275 ZFR2Q9UPR6 939 aaKnown RBP16.32■□□□□ 0.2
DDX39A-216ENST00000591275 OR51B4Q9Y5P0 310 aa16.32■□□□□ 0.2
DDX39A-216ENST00000591275 TRPM6Q9BX84 2022 aa16.31■□□□□ 0.2
DDX39A-216ENST00000591275 A0A1W2PNU3 283 aaPredicted RBP16.31■□□□□ 0.2
DDX39A-216ENST00000591275 A0A1W2PQ27 194 aa16.31■□□□□ 0.2
DDX39A-216ENST00000591275 A0A1W2PQ64 194 aa16.31■□□□□ 0.2
DDX39A-216ENST00000591275 SCAMP1O15126 338 aa16.31■□□□□ 0.2
DDX39A-216ENST00000591275 SRCP12931 536 aa16.31■□□□□ 0.2
DDX39A-216ENST00000591275 TGM2P21980 687 aa16.31■□□□□ 0.2
DDX39A-216ENST00000591275 CHRNA3P32297 505 aa16.31■□□□□ 0.2
DDX39A-216ENST00000591275 DUSP3P51452 185 aaPredicted RBP16.31■□□□□ 0.2
DDX39A-216ENST00000591275 LRRC63Q05C16 580 aa16.31■□□□□ 0.2
DDX39A-216ENST00000591275 AUHQ13825 339 aaKnown RBP16.31■□□□□ 0.2
DDX39A-216ENST00000591275 ISXQ2M1V0 245 aa16.31■□□□□ 0.2
DDX39A-216ENST00000591275 CCDC40Q4G0X9 1142 aa16.31■□□□□ 0.2
DDX39A-216ENST00000591275 Q6ZSR6 202 aa16.31■□□□□ 0.2
DDX39A-216ENST00000591275 PTAR1Q7Z6K3 402 aaPredicted RBP16.31■□□□□ 0.2
DDX39A-216ENST00000591275 ATXN7L3BQ96GX2 97 aa16.31■□□□□ 0.2
DDX39A-216ENST00000591275 KREMEN1Q96MU8 473 aa16.31■□□□□ 0.2
DDX39A-216ENST00000591275 PPP1R9BQ96SB3 815 aa16.31■□□□□ 0.2
DDX39A-216ENST00000591275 DPH1Q9BZG8 443 aa16.31■□□□□ 0.2
DDX39A-216ENST00000591275 MUC3BQ9H195 1237 aa16.31■□□□□ 0.2
DDX39A-216ENST00000591275 THAP9Q9H5L6 903 aa16.31■□□□□ 0.2
DDX39A-216ENST00000591275 CLMPQ9H6B4 373 aa16.31■□□□□ 0.2
DDX39A-216ENST00000591275 RMND1Q9NWS8 449 aa16.31■□□□□ 0.2
DDX39A-216ENST00000591275 ZDHHC9Q9Y397 364 aa16.31■□□□□ 0.2
DDX39A-216ENST00000591275 RP1P56715 2156 aa16.31■□□□□ 0.2
DDX39A-216ENST00000591275 CPED1A4D0V7 1026 aa16.3■□□□□ 0.2
DDX39A-216ENST00000591275 PMS2P1A4D2B8 440 aa16.3■□□□□ 0.2
DDX39A-216ENST00000591275 NEMP2A6NFY4 417 aa16.3■□□□□ 0.2
DDX39A-216ENST00000591275 K7ERQ8 282 aa16.3■□□□□ 0.2
DDX39A-216ENST00000591275 SNAP91O60641 907 aa16.3■□□□□ 0.2
DDX39A-216ENST00000591275 LETM1O95202 739 aaPredicted RBP16.3■□□□□ 0.2
DDX39A-216ENST00000591275 SLC2A3P11169 496 aa16.3■□□□□ 0.2
DDX39A-216ENST00000591275 CCR1P32246 355 aa16.3■□□□□ 0.2
DDX39A-216ENST00000591275 CDK17Q00537 523 aa16.3■□□□□ 0.2
DDX39A-216ENST00000591275 GCNT1Q02742 428 aa16.3■□□□□ 0.2
DDX39A-216ENST00000591275 CDKN3Q16667 212 aa16.3■□□□□ 0.2
DDX39A-216ENST00000591275 NEK5Q6P3R8 708 aa16.3■□□□□ 0.2
DDX39A-216ENST00000591275 FOXR1Q6PIV2 292 aa16.3■□□□□ 0.2
DDX39A-216ENST00000591275 ABI3BPQ7Z7G0 1075 aa16.3■□□□□ 0.2
DDX39A-216ENST00000591275 C14orf80Q86SX3 495 aa16.3■□□□□ 0.2
DDX39A-216ENST00000591275 TMEM110Q86TL2 294 aa16.3■□□□□ 0.2
DDX39A-216ENST00000591275 DEFB106AQ8N104 65 aa16.3■□□□□ 0.2
DDX39A-216ENST00000591275 ATP11CQ8NB49 1132 aa16.3■□□□□ 0.2
DDX39A-216ENST00000591275 OR2A12Q8NGT7 310 aa16.3■□□□□ 0.2
DDX39A-216ENST00000591275 GRIN3AQ8TCU5 1115 aa16.3■□□□□ 0.2
DDX39A-216ENST00000591275 STK32AQ8WU08 396 aa16.3■□□□□ 0.2
DDX39A-216ENST00000591275 MED15Q96RN5 788 aa16.3■□□□□ 0.2
DDX39A-216ENST00000591275 ACP6Q9NPH0 428 aa16.3■□□□□ 0.2
DDX39A-216ENST00000591275 DYRK4Q9NR20 520 aa16.3■□□□□ 0.2
DDX39A-216ENST00000591275 FARP1Q9Y4F1 1045 aaPredicted RBP16.3■□□□□ 0.2
DDX39A-216ENST00000591275 COL27A1Q8IZC6 1860 aaPredicted RBP16.29■□□□□ 0.2
DDX39A-216ENST00000591275 POM121BA6NF01 834 aa16.29■□□□□ 0.2
DDX39A-216ENST00000591275 A6NNZ2 444 aa16.29■□□□□ 0.2
DDX39A-216ENST00000591275 PMM2O15305 246 aa16.29■□□□□ 0.2
DDX39A-216ENST00000591275 SLC28A2O43868 658 aa16.29■□□□□ 0.2
DDX39A-216ENST00000591275 GRAP2O75791 330 aa16.29■□□□□ 0.2
DDX39A-216ENST00000591275 RRM1P23921 792 aa16.29■□□□□ 0.2
DDX39A-216ENST00000591275 RBMS1P29558 406 aaKnown RBP16.29■□□□□ 0.2
DDX39A-216ENST00000591275 HNRNPKP61978 463 aaKnown RBP eCLIP16.29■□□□□ 0.2
DDX39A-216ENST00000591275 CETN1Q12798 172 aa16.29■□□□□ 0.2
DDX39A-216ENST00000591275 NME3Q13232 169 aa16.29■□□□□ 0.2
DDX39A-216ENST00000591275 MAPK8IP2Q13387 824 aaPredicted RBP16.29■□□□□ 0.2
DDX39A-216ENST00000591275 FZD2Q14332 565 aa16.29■□□□□ 0.2
DDX39A-216ENST00000591275 COBLL1Q53SF7 1204 aa16.29■□□□□ 0.2
DDX39A-216ENST00000591275 GUSBP11Q6P575 273 aa16.29■□□□□ 0.2
DDX39A-216ENST00000591275 CRTC1Q6UUV9 634 aa16.29■□□□□ 0.2
DDX39A-216ENST00000591275 EFL1Q7Z2Z2 1120 aaKnown RBP16.29■□□□□ 0.2
DDX39A-216ENST00000591275 CHST14Q8NCH0 376 aa16.29■□□□□ 0.2
DDX39A-216ENST00000591275 ZNF548Q8NEK5 533 aaPredicted RBP16.29■□□□□ 0.2
DDX39A-216ENST00000591275 SNRNP27Q8WVK2 155 aaKnown RBP16.29■□□□□ 0.2
DDX39A-216ENST00000591275 CCDC34Q96HJ3 373 aa16.29■□□□□ 0.2
DDX39A-216ENST00000591275 BMFQ96LC9 184 aa16.29■□□□□ 0.2
DDX39A-216ENST00000591275 PSMB7Q99436 277 aa16.29■□□□□ 0.2
DDX39A-216ENST00000591275 DUSP23Q9BVJ7 150 aa16.29■□□□□ 0.2
DDX39A-216ENST00000591275 SIK2Q9H0K1 926 aa16.29■□□□□ 0.2
DDX39A-216ENST00000591275 USP29Q9HBJ7 922 aa16.29■□□□□ 0.2
DDX39A-216ENST00000591275 GDPD2Q9HCC8 539 aa16.29■□□□□ 0.2
DDX39A-216ENST00000591275 EVA1BQ9NVM1 165 aa16.29■□□□□ 0.2
DDX39A-216ENST00000591275 HS3ST2Q9Y278 367 aa16.29■□□□□ 0.2
DDX39A-216ENST00000591275 HS3ST4Q9Y661 456 aa16.29■□□□□ 0.2
DDX39A-216ENST00000591275 COL12A1Q99715 3063 aa16.29■□□□□ 0.2
DDX39A-216ENST00000591275 TLN1Q9Y490 2541 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms