RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 LBRQ14739 615 aaKnown RBP13.24□□□□□ -0.29
PTBP1-216ENST00000590887 BBS9Q3SYG4 887 aa13.24□□□□□ -0.29
PTBP1-216ENST00000590887 RNF219Q5W0B1 726 aaPredicted RBP13.24□□□□□ -0.29
PTBP1-216ENST00000590887 TMC5Q6UXY8 1006 aa13.24□□□□□ -0.29
PTBP1-216ENST00000590887 SPRED2Q7Z698 418 aa13.24□□□□□ -0.29
PTBP1-216ENST00000590887 GPR149Q86SP6 731 aa13.24□□□□□ -0.29
PTBP1-216ENST00000590887 MFN1Q8IWA4 741 aa13.24□□□□□ -0.29
PTBP1-216ENST00000590887 TEX26Q8N6G2 289 aa13.24□□□□□ -0.29
PTBP1-216ENST00000590887 PDCD7Q8N8D1 485 aaKnown RBP13.24□□□□□ -0.29
PTBP1-216ENST00000590887 TSEN2Q8NCE0 465 aaKnown RBP13.24□□□□□ -0.29
PTBP1-216ENST00000590887 TTC16Q8NEE8 873 aa13.24□□□□□ -0.29
PTBP1-216ENST00000590887 ACDQ96AP0 544 aa13.24□□□□□ -0.29
PTBP1-216ENST00000590887 PABPC5Q96DU9 382 aaKnown RBP13.24□□□□□ -0.29
PTBP1-216ENST00000590887 LRCH3Q96II8 777 aa13.24□□□□□ -0.29
PTBP1-216ENST00000590887 SERPINB12Q96P63 405 aa13.24□□□□□ -0.29
PTBP1-216ENST00000590887 ZIM3Q96PE6 472 aa13.24□□□□□ -0.29
PTBP1-216ENST00000590887 C2orf49Q9BVC5 232 aaPredicted RBP13.24□□□□□ -0.29
PTBP1-216ENST00000590887 CINPQ9BW66 212 aaPredicted RBP13.24□□□□□ -0.29
PTBP1-216ENST00000590887 POLR1EQ9GZS1 481 aaKnown RBP13.24□□□□□ -0.29
PTBP1-216ENST00000590887 SLC25A51Q9H1U9 297 aa13.24□□□□□ -0.29
PTBP1-216ENST00000590887 SEMA4AQ9H3S1 761 aa13.24□□□□□ -0.29
PTBP1-216ENST00000590887 ZNF576Q9H609 170 aa13.24□□□□□ -0.29
PTBP1-216ENST00000590887 NDFIP2Q9NV92 336 aa13.24□□□□□ -0.29
PTBP1-216ENST00000590887 THG1LQ9NWX6 298 aaKnown RBP13.24□□□□□ -0.29
PTBP1-216ENST00000590887 ZNF212Q9UDV6 495 aa13.24□□□□□ -0.29
PTBP1-216ENST00000590887 CHD9Q3L8U1 2897 aa13.24□□□□□ -0.29
PTBP1-216ENST00000590887 A0A0C4DFX4 3053 aa13.23□□□□□ -0.29
PTBP1-216ENST00000590887 GOLGA8MH3BSY2 632 aa13.23□□□□□ -0.29
PTBP1-216ENST00000590887 TP73O15350 636 aa13.23□□□□□ -0.29
PTBP1-216ENST00000590887 MOSPD3O75425 235 aa13.23□□□□□ -0.29
PTBP1-216ENST00000590887 SASH3O75995 380 aa13.23□□□□□ -0.29
PTBP1-216ENST00000590887 SUN1O94901 812 aa13.23□□□□□ -0.29
PTBP1-216ENST00000590887 CPP00450 1065 aa13.23□□□□□ -0.29
PTBP1-216ENST00000590887 NFKB1P19838 968 aa13.23□□□□□ -0.29
PTBP1-216ENST00000590887 CA4P22748 312 aa13.23□□□□□ -0.29
PTBP1-216ENST00000590887 CCR2P41597 374 aa13.23□□□□□ -0.29
PTBP1-216ENST00000590887 KCNC3Q14003 757 aa13.23□□□□□ -0.29
PTBP1-216ENST00000590887 SLC29A2Q14542 456 aa13.23□□□□□ -0.29
PTBP1-216ENST00000590887 DMC1Q14565 340 aa13.23□□□□□ -0.29
PTBP1-216ENST00000590887 KLHL38Q2WGJ6 581 aa13.23□□□□□ -0.29
PTBP1-216ENST00000590887 INO80DQ53TQ3 878 aaPredicted RBP13.23□□□□□ -0.29
PTBP1-216ENST00000590887 RALGPS1Q5JS13 557 aa13.23□□□□□ -0.29
PTBP1-216ENST00000590887 CEP85LQ5SZL2 805 aa13.23□□□□□ -0.29
PTBP1-216ENST00000590887 RARS2Q5T160 578 aaKnown RBP13.23□□□□□ -0.29
PTBP1-216ENST00000590887 ANKRD22Q5VYY1 191 aa13.23□□□□□ -0.29
PTBP1-216ENST00000590887 ANKRD54Q6NXT1 300 aa13.23□□□□□ -0.29
PTBP1-216ENST00000590887 ARID3BQ8IVW6 561 aaPredicted RBP13.23□□□□□ -0.29
PTBP1-216ENST00000590887 BBS7Q8IWZ6 715 aa13.23□□□□□ -0.29
PTBP1-216ENST00000590887 RIBC1Q8N443 379 aaPredicted RBP13.23□□□□□ -0.29
PTBP1-216ENST00000590887 TAB3Q8N5C8 712 aaPredicted RBP13.23□□□□□ -0.29
PTBP1-216ENST00000590887 DNAAF3Q8N9W5 541 aa13.23□□□□□ -0.29
PTBP1-216ENST00000590887 FIBINQ8TAL6 211 aa13.23□□□□□ -0.29
PTBP1-216ENST00000590887 ADAMTS19Q8TE59 1207 aa13.23□□□□□ -0.29
PTBP1-216ENST00000590887 USP33Q8TEY7 942 aa13.23□□□□□ -0.29
PTBP1-216ENST00000590887 DEPDC1BQ8WUY9 529 aa13.23□□□□□ -0.29
PTBP1-216ENST00000590887 USP13Q92995 863 aaPredicted RBP13.23□□□□□ -0.29
PTBP1-216ENST00000590887 TCEAL4Q96EI5 215 aa13.23□□□□□ -0.29
PTBP1-216ENST00000590887 RIPOR3Q96MK2 946 aa13.23□□□□□ -0.29
PTBP1-216ENST00000590887 PRICKLE1Q96MT3 831 aaPredicted RBP13.23□□□□□ -0.29
PTBP1-216ENST00000590887 TMEM109Q9BVC6 243 aa13.23□□□□□ -0.29
PTBP1-216ENST00000590887 FSD1LQ9BXM9 530 aa13.23□□□□□ -0.29
PTBP1-216ENST00000590887 ACE2Q9BYF1 805 aaPredicted RBP13.23□□□□□ -0.29
PTBP1-216ENST00000590887 SLC2A11Q9BYW1 496 aa13.23□□□□□ -0.29
PTBP1-216ENST00000590887 NOL6Q9H6R4 1146 aaKnown RBP13.23□□□□□ -0.29
PTBP1-216ENST00000590887 VPS37BQ9H9H4 285 aa13.23□□□□□ -0.29
PTBP1-216ENST00000590887 SAMD15Q9P1V8 674 aa13.23□□□□□ -0.29
PTBP1-216ENST00000590887 TTLL3Q9Y4R7 772 aa13.23□□□□□ -0.29
PTBP1-216ENST00000590887 EYSQ5T1H1 3165 aa13.23□□□□□ -0.29
PTBP1-216ENST00000590887 MYO18AQ92614 2054 aaKnown RBP13.22□□□□□ -0.29
PTBP1-216ENST00000590887 TRDMT1O14717 391 aaKnown RBP13.22□□□□□ -0.29
PTBP1-216ENST00000590887 GREM1O60565 184 aa13.22□□□□□ -0.29
PTBP1-216ENST00000590887 TMEM63AO94886 807 aa13.22□□□□□ -0.29
PTBP1-216ENST00000590887 ACSL3O95573 720 aa13.22□□□□□ -0.29
PTBP1-216ENST00000590887 STX2P32856 288 aa13.22□□□□□ -0.29
PTBP1-216ENST00000590887 MTHFRP42898 656 aa13.22□□□□□ -0.29
PTBP1-216ENST00000590887 SULT2A1Q06520 285 aa13.22□□□□□ -0.29
PTBP1-216ENST00000590887 CDH17Q12864 832 aa13.22□□□□□ -0.29
PTBP1-216ENST00000590887 ZBTB17Q13105 803 aa13.22□□□□□ -0.29
PTBP1-216ENST00000590887 USP4Q13107 963 aa13.22□□□□□ -0.29
PTBP1-216ENST00000590887 SLC14A2Q15849 920 aa13.22□□□□□ -0.29
PTBP1-216ENST00000590887 KYNUQ16719 465 aa13.22□□□□□ -0.29
PTBP1-216ENST00000590887 SLC5A9Q2M3M2 681 aa13.22□□□□□ -0.29
PTBP1-216ENST00000590887 ARTNQ5T4W7 220 aa13.22□□□□□ -0.29
PTBP1-216ENST00000590887 FAXCQ5TGI0 409 aa13.22□□□□□ -0.29
PTBP1-216ENST00000590887 CIR1Q86X95 450 aaPredicted RBP13.22□□□□□ -0.29
PTBP1-216ENST00000590887 TP53INP2Q8IXH6 220 aa13.22□□□□□ -0.29
PTBP1-216ENST00000590887 NETO2Q8NC67 525 aa13.22□□□□□ -0.29
PTBP1-216ENST00000590887 GABPB2Q8TAK5 448 aaPredicted RBP13.22□□□□□ -0.29
PTBP1-216ENST00000590887 ZSCAN18Q8TBC5 510 aaPredicted RBP13.22□□□□□ -0.29
PTBP1-216ENST00000590887 LRRN4Q8WUT4 740 aa13.22□□□□□ -0.29
PTBP1-216ENST00000590887 XPO6Q96QU8 1125 aaKnown RBP13.22□□□□□ -0.29
PTBP1-216ENST00000590887 NINJ2Q9NZG7 142 aa13.22□□□□□ -0.29
PTBP1-216ENST00000590887 FETUBQ9UGM5 382 aa13.22□□□□□ -0.29
PTBP1-216ENST00000590887 VPS28Q9UK41 221 aa13.22□□□□□ -0.29
PTBP1-216ENST00000590887 NUP210Q8TEM1 1887 aaPredicted RBP13.21□□□□□ -0.29
PTBP1-216ENST00000590887 HMGB1P1B2RPK0 211 aaPredicted RBP13.21□□□□□ -0.29
PTBP1-216ENST00000590887 GFRA2O00451 464 aa13.21□□□□□ -0.29
PTBP1-216ENST00000590887 RASGRF2O14827 1237 aa13.21□□□□□ -0.29
PTBP1-216ENST00000590887 TCEA3O75764 348 aa13.21□□□□□ -0.29
PTBP1-216ENST00000590887 CEBPBP17676 345 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms