RNA–Protein interactions for RNA: ENST00000590530.5

GCDH-212, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,871 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-212ENST00000590530 USP33Q8TEY7 942 aa17.33■□□□□ 0.36
GCDH-212ENST00000590530 TLCD1Q96CP7 247 aa17.33■□□□□ 0.36
GCDH-212ENST00000590530 SERPINB12Q96P63 405 aa17.33■□□□□ 0.36
GCDH-212ENST00000590530 TSGA13Q96PP4 275 aa17.33■□□□□ 0.36
GCDH-212ENST00000590530 VAT1Q99536 393 aa17.33■□□□□ 0.36
GCDH-212ENST00000590530 CLDND1Q9NY35 253 aa17.33■□□□□ 0.36
GCDH-212ENST00000590530 DONSONQ9NYP3 566 aa17.33■□□□□ 0.36
GCDH-212ENST00000590530 LSM7Q9UK45 103 aaKnown RBP17.33■□□□□ 0.36
GCDH-212ENST00000590530 APRTP07741 180 aa17.32■□□□□ 0.36
GCDH-212ENST00000590530 PTPN3P26045 913 aa17.32■□□□□ 0.36
GCDH-212ENST00000590530 GYS2P54840 703 aa17.32■□□□□ 0.36
GCDH-212ENST00000590530 CTC1Q2NKJ3 1217 aa17.32■□□□□ 0.36
GCDH-212ENST00000590530 PARP6Q2NL67 630 aa17.32■□□□□ 0.36
GCDH-212ENST00000590530 RABGAP1LQ5R372 815 aa17.32■□□□□ 0.36
GCDH-212ENST00000590530 CXorf57Q6NSI4 855 aaKnown RBP17.32■□□□□ 0.36
GCDH-212ENST00000590530 CCDC13Q8IYE1 715 aa17.32■□□□□ 0.36
GCDH-212ENST00000590530 ZNF567Q8N184 647 aa17.32■□□□□ 0.36
GCDH-212ENST00000590530 SH2D3CQ8N5H7 860 aa17.32■□□□□ 0.36
GCDH-212ENST00000590530 TDRD5Q8NAT2 981 aaKnown RBP17.32■□□□□ 0.36
GCDH-212ENST00000590530 EPS8L3Q8TE67 593 aaKnown RBP17.32■□□□□ 0.36
GCDH-212ENST00000590530 TMA16Q96EY4 203 aaKnown RBP17.32■□□□□ 0.36
GCDH-212ENST00000590530 CCDC77Q9BR77 488 aa17.32■□□□□ 0.36
GCDH-212ENST00000590530 WDR83Q9BRX9 315 aaKnown RBP17.32■□□□□ 0.36
GCDH-212ENST00000590530 STMN4Q9H169 189 aaPredicted RBP17.32■□□□□ 0.36
GCDH-212ENST00000590530 CENPHQ9H3R5 247 aa17.32■□□□□ 0.36
GCDH-212ENST00000590530 WNT6Q9Y6F9 365 aa17.32■□□□□ 0.36
GCDH-212ENST00000590530 LATS1O95835 1130 aa17.31■□□□□ 0.36
GCDH-212ENST00000590530 PEX11BO96011 259 aa17.31■□□□□ 0.36
GCDH-212ENST00000590530 GLDCP23378 1020 aa17.31■□□□□ 0.36
GCDH-212ENST00000590530 MAGEA3P43357 314 aa17.31■□□□□ 0.36
GCDH-212ENST00000590530 CDH4P55283 916 aa17.31■□□□□ 0.36
GCDH-212ENST00000590530 MTM1Q13496 603 aa17.31■□□□□ 0.36
GCDH-212ENST00000590530 CCDC38Q502W7 563 aa17.31■□□□□ 0.36
GCDH-212ENST00000590530 TNFAIP8L3Q5GJ75 292 aa17.31■□□□□ 0.36
GCDH-212ENST00000590530 LRRC49Q8IUZ0 686 aa17.31■□□□□ 0.36
GCDH-212ENST00000590530 ATPAF2Q8N5M1 289 aa17.31■□□□□ 0.36
GCDH-212ENST00000590530 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.31■□□□□ 0.36
GCDH-212ENST00000590530 PYROXD1Q8WU10 500 aa17.31■□□□□ 0.36
GCDH-212ENST00000590530 PPCSQ9HAB8 311 aa17.31■□□□□ 0.36
GCDH-212ENST00000590530 XAB2Q9HCS7 855 aaKnown RBP17.31■□□□□ 0.36
GCDH-212ENST00000590530 TRHDEQ9UKU6 1024 aa17.31■□□□□ 0.36
GCDH-212ENST00000590530 NYNRINQ9P2P1 1898 aaKnown RBP17.31■□□□□ 0.36
GCDH-212ENST00000590530 E2F8A0AVK6 867 aa17.31■□□□□ 0.36
GCDH-212ENST00000590530 RAMP2O60895 175 aa17.31■□□□□ 0.36
GCDH-212ENST00000590530 AGTP01019 485 aa17.31■□□□□ 0.36
GCDH-212ENST00000590530 JCHAINP01591 159 aa17.31■□□□□ 0.36
GCDH-212ENST00000590530 NR1D1P20393 614 aa17.31■□□□□ 0.36
GCDH-212ENST00000590530 CD68P34810 354 aaPredicted RBP17.31■□□□□ 0.36
GCDH-212ENST00000590530 NDST2P52849 883 aa17.31■□□□□ 0.36
GCDH-212ENST00000590530 USP4Q13107 963 aa17.31■□□□□ 0.36
GCDH-212ENST00000590530 POLD3Q15054 466 aaPredicted RBP17.31■□□□□ 0.36
GCDH-212ENST00000590530 BBS9Q3SYG4 887 aa17.31■□□□□ 0.36
GCDH-212ENST00000590530 KDM7AQ6ZMT4 941 aa17.31■□□□□ 0.36
GCDH-212ENST00000590530 TMEM25Q86YD3 366 aa17.31■□□□□ 0.36
GCDH-212ENST00000590530 CARNMT1Q8N4J0 409 aa17.31■□□□□ 0.36
GCDH-212ENST00000590530 CNTD1Q8N815 330 aa17.31■□□□□ 0.36
GCDH-212ENST00000590530 LRRC39Q96DD0 335 aa17.31■□□□□ 0.36
GCDH-212ENST00000590530 AGAP3Q96P47 875 aa17.31■□□□□ 0.36
GCDH-212ENST00000590530 GORASP1Q9BQQ3 440 aa17.31■□□□□ 0.36
GCDH-212ENST00000590530 PSD3Q9NYI0 1048 aa17.31■□□□□ 0.36
GCDH-212ENST00000590530 IPO11Q9UI26 975 aaKnown RBP17.31■□□□□ 0.36
GCDH-212ENST00000590530 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.31■□□□□ 0.36
GCDH-212ENST00000590530 TEX264Q9Y6I9 313 aa17.31■□□□□ 0.36
GCDH-212ENST00000590530 SHROOM3Q8TF72 1996 aa17.3■□□□□ 0.36
GCDH-212ENST00000590530 E7EVH7 732 aa17.3■□□□□ 0.36
GCDH-212ENST00000590530 RGS16O15492 202 aaPredicted RBP17.3■□□□□ 0.36
GCDH-212ENST00000590530 ZBTB24O43167 697 aaPredicted RBP17.3■□□□□ 0.36
GCDH-212ENST00000590530 BANF1O75531 89 aa17.3■□□□□ 0.36
GCDH-212ENST00000590530 CCNCP24863 283 aa17.3■□□□□ 0.36
GCDH-212ENST00000590530 HOXD9P28356 352 aaPredicted RBP17.3■□□□□ 0.36
GCDH-212ENST00000590530 MZF1P28698 734 aaPredicted RBP17.3■□□□□ 0.36
GCDH-212ENST00000590530 PHBP35232 272 aa17.3■□□□□ 0.36
GCDH-212ENST00000590530 MAPKAPK2P49137 400 aa17.3■□□□□ 0.36
GCDH-212ENST00000590530 SKOR1P84550 965 aa17.3■□□□□ 0.36
GCDH-212ENST00000590530 TERF2Q15554 542 aa17.3■□□□□ 0.36
GCDH-212ENST00000590530 DNAJC21Q5F1R6 531 aaKnown RBP17.3■□□□□ 0.36
GCDH-212ENST00000590530 ZNF534Q76KX8 674 aa17.3■□□□□ 0.36
GCDH-212ENST00000590530 CAND1Q86VP6 1230 aaKnown RBP17.3■□□□□ 0.36
GCDH-212ENST00000590530 ZNF354CQ86Y25 554 aa17.3■□□□□ 0.36
GCDH-212ENST00000590530 RIBC1Q8N443 379 aaPredicted RBP17.3■□□□□ 0.36
GCDH-212ENST00000590530 FBXO36Q8NEA4 188 aa17.3■□□□□ 0.36
GCDH-212ENST00000590530 DDI1Q8WTU0 396 aa17.3■□□□□ 0.36
GCDH-212ENST00000590530 ARHGEF2Q92974 986 aaKnown RBP17.3■□□□□ 0.36
GCDH-212ENST00000590530 ASIC4Q96FT7 647 aa17.3■□□□□ 0.36
GCDH-212ENST00000590530 ASB16Q96NS5 453 aa17.3■□□□□ 0.36
GCDH-212ENST00000590530 LMCD1Q9NZU5 365 aa17.3■□□□□ 0.36
GCDH-212ENST00000590530 KLHL8Q9P2G9 620 aaPredicted RBP17.3■□□□□ 0.36
GCDH-212ENST00000590530 A0A1B0GVM2 712 aa17.29■□□□□ 0.36
GCDH-212ENST00000590530 TCAF2A6NFQ2 919 aa17.29■□□□□ 0.36
GCDH-212ENST00000590530 CLDN11O75508 207 aa17.29■□□□□ 0.36
GCDH-212ENST00000590530 SPAG6O75602 509 aa17.29■□□□□ 0.36
GCDH-212ENST00000590530 MLNP12872 115 aa17.29■□□□□ 0.36
GCDH-212ENST00000590530 IFI35P80217 286 aaPredicted RBP17.29■□□□□ 0.36
GCDH-212ENST00000590530 SARNPP82979 210 aaKnown RBP17.29■□□□□ 0.36
GCDH-212ENST00000590530 GNA12Q03113 381 aa17.29■□□□□ 0.36
GCDH-212ENST00000590530 SERINC3Q13530 473 aa17.29■□□□□ 0.36
GCDH-212ENST00000590530 LONRF1Q17RB8 773 aa17.29■□□□□ 0.36
GCDH-212ENST00000590530 TRIM68Q6AZZ1 485 aa17.29■□□□□ 0.36
GCDH-212ENST00000590530 ITPRIPL1Q6GPH6 555 aa17.29■□□□□ 0.36
GCDH-212ENST00000590530 ANKMY2Q8IV38 441 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms