RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 DDX56Q9NY93 547 aaKnown RBP21.76■■□□□ 1.07
ATG4D-212ENST00000590096 SALL4Q9UJQ4 1053 aa21.76■■□□□ 1.07
ATG4D-212ENST00000590096 RIF1Q5UIP0 2472 aaKnown RBP21.75■■□□□ 1.07
ATG4D-212ENST00000590096 LRRD1A4D1F6 860 aa21.75■■□□□ 1.07
ATG4D-212ENST00000590096 DCLK1O15075 740 aa21.75■■□□□ 1.07
ATG4D-212ENST00000590096 PSTPIP1O43586 416 aa21.75■■□□□ 1.07
ATG4D-212ENST00000590096 HRO43593 1189 aa21.75■■□□□ 1.07
ATG4D-212ENST00000590096 ZNF217O75362 1048 aa21.75■■□□□ 1.07
ATG4D-212ENST00000590096 SERPINB6P35237 376 aa21.75■■□□□ 1.07
ATG4D-212ENST00000590096 SRSF5Q13243 272 aaKnown RBP21.75■■□□□ 1.07
ATG4D-212ENST00000590096 SERINC3Q13530 473 aa21.75■■□□□ 1.07
ATG4D-212ENST00000590096 GSE1Q14687 1217 aa21.75■■□□□ 1.07
ATG4D-212ENST00000590096 CACUL1Q86Y37 369 aa21.75■■□□□ 1.07
ATG4D-212ENST00000590096 PTPRN2Q92932 1015 aa21.75■■□□□ 1.07
ATG4D-212ENST00000590096 CCDC114Q96M63 670 aa21.75■■□□□ 1.07
ATG4D-212ENST00000590096 GOLPH3Q9H4A6 298 aa21.75■■□□□ 1.07
ATG4D-212ENST00000590096 FARP1Q9Y4F1 1045 aaPredicted RBP21.75■■□□□ 1.07
ATG4D-212ENST00000590096 ADGRG1Q9Y653 693 aa21.75■■□□□ 1.07
ATG4D-212ENST00000590096 NUP205Q92621 2012 aa21.74■■□□□ 1.07
ATG4D-212ENST00000590096 MACROD2A1Z1Q3 448 aa21.74■■□□□ 1.07
ATG4D-212ENST00000590096 K7ERQ8 282 aa21.74■■□□□ 1.07
ATG4D-212ENST00000590096 DFFAO00273 331 aa21.74■■□□□ 1.07
ATG4D-212ENST00000590096 BNIP3LO60238 219 aa21.74■■□□□ 1.07
ATG4D-212ENST00000590096 KRT1P04264 644 aa21.74■■□□□ 1.07
ATG4D-212ENST00000590096 VAV1P15498 845 aa21.74■■□□□ 1.07
ATG4D-212ENST00000590096 KDELR1P24390 212 aa21.74■■□□□ 1.07
ATG4D-212ENST00000590096 MMRN1Q13201 1228 aa21.74■■□□□ 1.07
ATG4D-212ENST00000590096 SIM2Q14190 667 aaPredicted RBP21.74■■□□□ 1.07
ATG4D-212ENST00000590096 ELAVL3Q14576 367 aaKnown RBP21.74■■□□□ 1.07
ATG4D-212ENST00000590096 ANKRD20A8PQ5CZ79 823 aa21.74■■□□□ 1.07
ATG4D-212ENST00000590096 ZNF776Q68DI1 518 aaPredicted RBP21.74■■□□□ 1.07
ATG4D-212ENST00000590096 C22orf39Q6P5X5 142 aa21.74■■□□□ 1.07
ATG4D-212ENST00000590096 PRR23BQ6ZRT6 265 aa21.74■■□□□ 1.07
ATG4D-212ENST00000590096 Q6ZVU0 165 aa21.74■■□□□ 1.07
ATG4D-212ENST00000590096 METTL3Q86U44 580 aaKnown RBP21.74■■□□□ 1.07
ATG4D-212ENST00000590096 C11orf74Q86VG3 221 aa21.74■■□□□ 1.07
ATG4D-212ENST00000590096 STK40Q8N2I9 435 aa21.74■■□□□ 1.07
ATG4D-212ENST00000590096 RAPGEF5Q92565 580 aa21.74■■□□□ 1.07
ATG4D-212ENST00000590096 TSGA10Q9BZW7 698 aa21.74■■□□□ 1.07
ATG4D-212ENST00000590096 CEP44Q9C0F1 390 aa21.74■■□□□ 1.07
ATG4D-212ENST00000590096 SLC39A8Q9C0K1 460 aa21.74■■□□□ 1.07
ATG4D-212ENST00000590096 KLC2Q9H0B6 622 aa21.74■■□□□ 1.07
ATG4D-212ENST00000590096 EPC1Q9H2F5 836 aa21.74■■□□□ 1.07
ATG4D-212ENST00000590096 ETNK2Q9NVF9 386 aa21.74■■□□□ 1.07
ATG4D-212ENST00000590096 RAB23Q9ULC3 237 aa21.74■■□□□ 1.07
ATG4D-212ENST00000590096 INVSQ9Y283 1065 aa21.74■■□□□ 1.07
ATG4D-212ENST00000590096 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.74■■□□□ 1.07
ATG4D-212ENST00000590096 NYNRINQ9P2P1 1898 aaKnown RBP21.74■■□□□ 1.07
ATG4D-212ENST00000590096 SMAD6O43541 496 aaKnown RBP21.73■■□□□ 1.07
ATG4D-212ENST00000590096 DNTTP04053 509 aa21.73■■□□□ 1.07
ATG4D-212ENST00000590096 PTMAP06454 111 aaKnown RBP21.73■■□□□ 1.07
ATG4D-212ENST00000590096 IL4RP24394 825 aa21.73■■□□□ 1.07
ATG4D-212ENST00000590096 P2RY2P41231 377 aa21.73■■□□□ 1.07
ATG4D-212ENST00000590096 RECQLP46063 649 aaPredicted RBP21.73■■□□□ 1.07
ATG4D-212ENST00000590096 PAPOLAP51003 745 aaKnown RBP21.73■■□□□ 1.07
ATG4D-212ENST00000590096 CCZ1BP86790 482 aa21.73■■□□□ 1.07
ATG4D-212ENST00000590096 CCZ1P86791 482 aaPredicted RBP21.73■■□□□ 1.07
ATG4D-212ENST00000590096 ZBTB16Q05516 673 aa21.73■■□□□ 1.07
ATG4D-212ENST00000590096 TTC31Q49AM3 519 aaPredicted RBP21.73■■□□□ 1.07
ATG4D-212ENST00000590096 AFMIDQ63HM1 303 aa21.73■■□□□ 1.07
ATG4D-212ENST00000590096 DSG4Q86SJ6 1040 aa21.73■■□□□ 1.07
ATG4D-212ENST00000590096 NPWQ8N729 165 aa21.73■■□□□ 1.07
ATG4D-212ENST00000590096 RLN3Q8WXF3 142 aa21.73■■□□□ 1.07
ATG4D-212ENST00000590096 OR8D1Q8WZ84 308 aa21.73■■□□□ 1.07
ATG4D-212ENST00000590096 NKD2Q969F2 451 aaPredicted RBP21.73■■□□□ 1.07
ATG4D-212ENST00000590096 PHOX2BQ99453 314 aa21.73■■□□□ 1.07
ATG4D-212ENST00000590096 RSPH9Q9H1X1 276 aaPredicted RBP21.73■■□□□ 1.07
ATG4D-212ENST00000590096 CYP8B1Q9UNU6 501 aa21.73■■□□□ 1.07
ATG4D-212ENST00000590096 FCF1Q9Y324 198 aaKnown RBP21.73■■□□□ 1.07
ATG4D-212ENST00000590096 MFHAS1Q9Y4C4 1052 aa21.73■■□□□ 1.07
ATG4D-212ENST00000590096 PROB1E7EW31 1015 aa21.72■■□□□ 1.07
ATG4D-212ENST00000590096 KRT86O43790 486 aa21.72■■□□□ 1.07
ATG4D-212ENST00000590096 CCDC175P0C221 793 aa21.72■■□□□ 1.07
ATG4D-212ENST00000590096 DNA2P51530 1060 aa21.72■■□□□ 1.07
ATG4D-212ENST00000590096 RPS14P62263 151 aaKnown RBP21.72■■□□□ 1.07
ATG4D-212ENST00000590096 MAP7D1Q3KQU3 841 aa21.72■■□□□ 1.07
ATG4D-212ENST00000590096 LEKR1Q6ZMV7 388 aa21.72■■□□□ 1.07
ATG4D-212ENST00000590096 VSIG1Q86XK7 387 aa21.72■■□□□ 1.07
ATG4D-212ENST00000590096 MMAAQ8IVH4 418 aaKnown RBP21.72■■□□□ 1.07
ATG4D-212ENST00000590096 ARHGAP12Q8IWW6 846 aa21.72■■□□□ 1.07
ATG4D-212ENST00000590096 PCDH20Q8N6Y1 951 aaKnown RBP21.72■■□□□ 1.07
ATG4D-212ENST00000590096 NETO2Q8NC67 525 aa21.72■■□□□ 1.07
ATG4D-212ENST00000590096 KIAA1524Q8TCG1 905 aa21.72■■□□□ 1.07
ATG4D-212ENST00000590096 CASKIN2Q8WXE0 1202 aa21.72■■□□□ 1.07
ATG4D-212ENST00000590096 SP110Q9HB58 689 aa21.72■■□□□ 1.07
ATG4D-212ENST00000590096 TRIM10Q9UDY6 481 aa21.72■■□□□ 1.07
ATG4D-212ENST00000590096 ACTL7AQ9Y615 435 aa21.72■■□□□ 1.07
ATG4D-212ENST00000590096 CFAP54Q96N23 3096 aa21.72■■□□□ 1.07
ATG4D-212ENST00000590096 ZNF487B1APH4 448 aa21.71■■□□□ 1.07
ATG4D-212ENST00000590096 ALOX15BO15296 676 aa21.71■■□□□ 1.07
ATG4D-212ENST00000590096 MAP3K13O43283 966 aa21.71■■□□□ 1.07
ATG4D-212ENST00000590096 CD160O95971 181 aa21.71■■□□□ 1.07
ATG4D-212ENST00000590096 SFSWAPQ12872 951 aaKnown RBP21.71■■□□□ 1.07
ATG4D-212ENST00000590096 SYCE1Q8N0S2 351 aa21.71■■□□□ 1.07
ATG4D-212ENST00000590096 PCDH19Q8TAB3 1148 aa21.71■■□□□ 1.07
ATG4D-212ENST00000590096 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.71■■□□□ 1.07
ATG4D-212ENST00000590096 ISG20Q96AZ6 181 aaKnown RBP21.71■■□□□ 1.07
ATG4D-212ENST00000590096 FAF2Q96CS3 445 aa21.71■■□□□ 1.07
ATG4D-212ENST00000590096 FAM129BQ96TA1 746 aa21.71■■□□□ 1.07
ATG4D-212ENST00000590096 MAK16Q9BXY0 300 aaKnown RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms