RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 SPINT1O43278 529 aa13.11□□□□□ -0.31
PRKCSH-210ENST00000589990 HGFP14210 728 aa13.11□□□□□ -0.31
PRKCSH-210ENST00000589990 ZNF18P17022 549 aa13.11□□□□□ -0.31
PRKCSH-210ENST00000589990 WT1P19544 449 aaPredicted RBP13.11□□□□□ -0.31
PRKCSH-210ENST00000589990 HNRNPA2B1P22626 353 aaKnown RBP13.11□□□□□ -0.31
PRKCSH-210ENST00000589990 AKT2P31751 481 aa13.11□□□□□ -0.31
PRKCSH-210ENST00000589990 GTF2H1P32780 548 aa13.11□□□□□ -0.31
PRKCSH-210ENST00000589990 GGCXP38435 758 aa13.11□□□□□ -0.31
PRKCSH-210ENST00000589990 NNMTP40261 264 aa13.11□□□□□ -0.31
PRKCSH-210ENST00000589990 DUSP3P51452 185 aaPredicted RBP13.11□□□□□ -0.31
PRKCSH-210ENST00000589990 CYP4F2P78329 520 aa13.11□□□□□ -0.31
PRKCSH-210ENST00000589990 ZCWPW2Q504Y3 356 aa13.11□□□□□ -0.31
PRKCSH-210ENST00000589990 ZCCHC8Q6NZY4 707 aaKnown RBP13.11□□□□□ -0.31
PRKCSH-210ENST00000589990 DSG4Q86SJ6 1040 aa13.11□□□□□ -0.31
PRKCSH-210ENST00000589990 RBFAQ8N0V3 343 aa13.11□□□□□ -0.31
PRKCSH-210ENST00000589990 CHST14Q8NCH0 376 aa13.11□□□□□ -0.31
PRKCSH-210ENST00000589990 WDR36Q8NI36 951 aaKnown RBP13.11□□□□□ -0.31
PRKCSH-210ENST00000589990 KAT5Q92993 513 aa13.11□□□□□ -0.31
PRKCSH-210ENST00000589990 CCDC97Q96F63 343 aaPredicted RBP13.11□□□□□ -0.31
PRKCSH-210ENST00000589990 FAXDC2Q96IV6 333 aa13.11□□□□□ -0.31
PRKCSH-210ENST00000589990 ZNF396Q96N95 335 aaPredicted RBP13.11□□□□□ -0.31
PRKCSH-210ENST00000589990 SERPINB11Q96P15 392 aa13.11□□□□□ -0.31
PRKCSH-210ENST00000589990 FAM13BQ9NYF5 915 aa13.11□□□□□ -0.31
PRKCSH-210ENST00000589990 TRPM6Q9BX84 2022 aa13.11□□□□□ -0.31
PRKCSH-210ENST00000589990 EME2A4GXA9 379 aaPredicted RBP13.1□□□□□ -0.31
PRKCSH-210ENST00000589990 NEMP2A6NFY4 417 aa13.1□□□□□ -0.31
PRKCSH-210ENST00000589990 C1QTNF3-AMACRE9PGA6 284 aa13.1□□□□□ -0.31
PRKCSH-210ENST00000589990 AGRPO00253 132 aa13.1□□□□□ -0.31
PRKCSH-210ENST00000589990 KPNA3O00505 521 aaPredicted RBP13.1□□□□□ -0.31
PRKCSH-210ENST00000589990 GCATO75600 419 aa13.1□□□□□ -0.31
PRKCSH-210ENST00000589990 NME1P15531 152 aaKnown RBP13.1□□□□□ -0.31
PRKCSH-210ENST00000589990 SLC5A2P31639 672 aa13.1□□□□□ -0.31
PRKCSH-210ENST00000589990 ME1P48163 572 aa13.1□□□□□ -0.31
PRKCSH-210ENST00000589990 PLK1P53350 603 aa13.1□□□□□ -0.31
PRKCSH-210ENST00000589990 TLE1Q04724 770 aa13.1□□□□□ -0.31
PRKCSH-210ENST00000589990 TMEM259Q4ZIN3 620 aa13.1□□□□□ -0.31
PRKCSH-210ENST00000589990 ZNF574Q6ZN55 896 aaPredicted RBP13.1□□□□□ -0.31
PRKCSH-210ENST00000589990 USP53Q70EK8 1073 aa13.1□□□□□ -0.31
PRKCSH-210ENST00000589990 VASH2Q86V25 355 aa13.1□□□□□ -0.31
PRKCSH-210ENST00000589990 SLC35F3Q8IY50 421 aa13.1□□□□□ -0.31
PRKCSH-210ENST00000589990 ARL14Q8N4G2 192 aa13.1□□□□□ -0.31
PRKCSH-210ENST00000589990 SH2D3CQ8N5H7 860 aa13.1□□□□□ -0.31
PRKCSH-210ENST00000589990 ERCC4Q92889 916 aaPredicted RBP13.1□□□□□ -0.31
PRKCSH-210ENST00000589990 FAM149B1Q96BN6 582 aa13.1□□□□□ -0.31
PRKCSH-210ENST00000589990 DUSP23Q9BVJ7 150 aa13.1□□□□□ -0.31
PRKCSH-210ENST00000589990 SYNDIG1Q9H7V2 258 aa13.1□□□□□ -0.31
PRKCSH-210ENST00000589990 USP29Q9HBJ7 922 aa13.1□□□□□ -0.31
PRKCSH-210ENST00000589990 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.1□□□□□ -0.31
PRKCSH-210ENST00000589990 OR51B4Q9Y5P0 310 aa13.1□□□□□ -0.31
PRKCSH-210ENST00000589990 SCN8AQ9UQD0 1980 aa13.09□□□□□ -0.31
PRKCSH-210ENST00000589990 SPTY2D1-AS1A0A0U1RR47 76 aa13.09□□□□□ -0.31
PRKCSH-210ENST00000589990 A6NNZ2 444 aa13.09□□□□□ -0.31
PRKCSH-210ENST00000589990 F5H5T6 163 aa13.09□□□□□ -0.31
PRKCSH-210ENST00000589990 AQP9O43315 295 aa13.09□□□□□ -0.31
PRKCSH-210ENST00000589990 SMAD6O43541 496 aaKnown RBP13.09□□□□□ -0.31
PRKCSH-210ENST00000589990 SNAP91O60641 907 aa13.09□□□□□ -0.31
PRKCSH-210ENST00000589990 PCDH8O95206 1070 aa13.09□□□□□ -0.31
PRKCSH-210ENST00000589990 PAK4O96013 591 aaPredicted RBP13.09□□□□□ -0.31
PRKCSH-210ENST00000589990 CSF2P04141 144 aa13.09□□□□□ -0.31
PRKCSH-210ENST00000589990 ITGA2BP08514 1039 aa13.09□□□□□ -0.31
PRKCSH-210ENST00000589990 SRCP12931 536 aa13.09□□□□□ -0.31
PRKCSH-210ENST00000589990 HNRNPKP61978 463 aaKnown RBP eCLIP13.09□□□□□ -0.31
PRKCSH-210ENST00000589990 SULT2A1Q06520 285 aa13.09□□□□□ -0.31
PRKCSH-210ENST00000589990 ENPEPQ07075 957 aa13.09□□□□□ -0.31
PRKCSH-210ENST00000589990 EIF2B5Q13144 721 aaKnown RBP13.09□□□□□ -0.31
PRKCSH-210ENST00000589990 MAPK8IP2Q13387 824 aaPredicted RBP13.09□□□□□ -0.31
PRKCSH-210ENST00000589990 NNTQ13423 1086 aa13.09□□□□□ -0.31
PRKCSH-210ENST00000589990 C1orf61Q13536 156 aa13.09□□□□□ -0.31
PRKCSH-210ENST00000589990 TMEM270Q6UE05 265 aa13.09□□□□□ -0.31
PRKCSH-210ENST00000589990 SMYD4Q8IYR2 804 aaPredicted RBP13.09□□□□□ -0.31
PRKCSH-210ENST00000589990 OR2A12Q8NGT7 310 aa13.09□□□□□ -0.31
PRKCSH-210ENST00000589990 LMX1AQ8TE12 382 aa13.09□□□□□ -0.31
PRKCSH-210ENST00000589990 HTR3CQ8WXA8 447 aa13.09□□□□□ -0.31
PRKCSH-210ENST00000589990 SGF29Q96ES7 293 aa13.09□□□□□ -0.31
PRKCSH-210ENST00000589990 IFT43Q96FT9 208 aa13.09□□□□□ -0.31
PRKCSH-210ENST00000589990 PPP1R13BQ96KQ4 1090 aa13.09□□□□□ -0.31
PRKCSH-210ENST00000589990 ARHGAP9Q9BRR9 750 aa13.09□□□□□ -0.31
PRKCSH-210ENST00000589990 FEM1AQ9BSK4 669 aa13.09□□□□□ -0.31
PRKCSH-210ENST00000589990 FOXP3Q9BZS1 431 aa13.09□□□□□ -0.31
PRKCSH-210ENST00000589990 RABGEF1Q9UJ41 708 aa13.09□□□□□ -0.31
PRKCSH-210ENST00000589990 COQ4Q9Y3A0 265 aa13.09□□□□□ -0.31
PRKCSH-210ENST00000589990 ZFC3H1O60293 1989 aaKnown RBP13.09□□□□□ -0.31
PRKCSH-210ENST00000589990 TEP1Q99973 2627 aaKnown RBP13.08□□□□□ -0.32
PRKCSH-210ENST00000589990 CCDC187A0A096LP49 1063 aa13.08□□□□□ -0.32
PRKCSH-210ENST00000589990 A0A1B0GVL5 298 aa13.08□□□□□ -0.32
PRKCSH-210ENST00000589990 ALOX15BO15296 676 aa13.08□□□□□ -0.32
PRKCSH-210ENST00000589990 TRUB2O95900 331 aaKnown RBP13.08□□□□□ -0.32
PRKCSH-210ENST00000589990 IGLV3-25P01717 112 aa13.08□□□□□ -0.32
PRKCSH-210ENST00000589990 APOEP02649 317 aa13.08□□□□□ -0.32
PRKCSH-210ENST00000589990 AFPP02771 609 aaKnown RBP13.08□□□□□ -0.32
PRKCSH-210ENST00000589990 CELA2BP08218 269 aaPredicted RBP13.08□□□□□ -0.32
PRKCSH-210ENST00000589990 RRM1P23921 792 aa13.08□□□□□ -0.32
PRKCSH-210ENST00000589990 CHRNA3P32297 505 aa13.08□□□□□ -0.32
PRKCSH-210ENST00000589990 ANP32AP39687 249 aaKnown RBP13.08□□□□□ -0.32
PRKCSH-210ENST00000589990 NUCB2P80303 420 aa13.08□□□□□ -0.32
PRKCSH-210ENST00000589990 EIF4EBP2Q13542 120 aaPredicted RBP13.08□□□□□ -0.32
PRKCSH-210ENST00000589990 SLC12A1Q13621 1099 aa13.08□□□□□ -0.32
PRKCSH-210ENST00000589990 CLCA4Q14CN2 919 aa13.08□□□□□ -0.32
PRKCSH-210ENST00000589990 NR0B2Q15466 257 aa13.08□□□□□ -0.32
PRKCSH-210ENST00000589990 TAF5Q15542 800 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms