RNA–Protein interactions for RNA: ENST00000589923.1

GRN-216, Transcript of granulin precursor, humanhuman

TSL 2

Gene GRN, Length 437 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-216ENST00000589923 HS1BP3Q53T59 392 aa11.14□□□□□ -0.63
GRN-216ENST00000589923 PERM1Q5SV97 790 aa11.14□□□□□ -0.63
GRN-216ENST00000589923 TCERG1LQ5VWI1 586 aa11.14□□□□□ -0.63
GRN-216ENST00000589923 FBXL22Q6P050 247 aa11.14□□□□□ -0.63
GRN-216ENST00000589923 CRTC1Q6UUV9 634 aa11.14□□□□□ -0.63
GRN-216ENST00000589923 BEND5Q7L4P6 421 aa11.14□□□□□ -0.63
GRN-216ENST00000589923 HORMAD1Q86X24 394 aa11.14□□□□□ -0.63
GRN-216ENST00000589923 SH2D3CQ8N5H7 860 aa11.14□□□□□ -0.63
GRN-216ENST00000589923 ZNF548Q8NEK5 533 aaPredicted RBP11.14□□□□□ -0.63
GRN-216ENST00000589923 LMO3Q8TAP4 145 aa11.14□□□□□ -0.63
GRN-216ENST00000589923 MAPK15Q8TD08 544 aa11.14□□□□□ -0.63
GRN-216ENST00000589923 ERCC4Q92889 916 aaPredicted RBP11.14□□□□□ -0.63
GRN-216ENST00000589923 FAM149B1Q96BN6 582 aa11.14□□□□□ -0.63
GRN-216ENST00000589923 BTN2A3PQ96KV6 586 aa11.14□□□□□ -0.63
GRN-216ENST00000589923 BMFQ96LC9 184 aa11.14□□□□□ -0.63
GRN-216ENST00000589923 PSMB7Q99436 277 aa11.14□□□□□ -0.63
GRN-216ENST00000589923 FEM1AQ9BSK4 669 aa11.14□□□□□ -0.63
GRN-216ENST00000589923 USP25Q9UHP3 1055 aa11.14□□□□□ -0.63
GRN-216ENST00000589923 DOPEY2Q9Y3R5 2298 aa11.14□□□□□ -0.63
GRN-216ENST00000589923 AHCTF1Q8WYP5 2266 aa11.13□□□□□ -0.63
GRN-216ENST00000589923 TRIM49BA6NDI0 452 aa11.13□□□□□ -0.63
GRN-216ENST00000589923 POM121BA6NF01 834 aa11.13□□□□□ -0.63
GRN-216ENST00000589923 C1QTNF3-AMACRE9PGA6 284 aa11.13□□□□□ -0.63
GRN-216ENST00000589923 F5H5T6 163 aa11.13□□□□□ -0.63
GRN-216ENST00000589923 K7ERQ8 282 aa11.13□□□□□ -0.63
GRN-216ENST00000589923 TERTO14746 1132 aaKnown RBP11.13□□□□□ -0.63
GRN-216ENST00000589923 RAD51BO15315 384 aa11.13□□□□□ -0.63
GRN-216ENST00000589923 SLC16A3O15427 465 aaKnown RBP11.13□□□□□ -0.63
GRN-216ENST00000589923 TRUB2O95900 331 aaKnown RBP11.13□□□□□ -0.63
GRN-216ENST00000589923 APOEP02649 317 aa11.13□□□□□ -0.63
GRN-216ENST00000589923 SRCP12931 536 aa11.13□□□□□ -0.63
GRN-216ENST00000589923 HNRNPA2B1P22626 353 aaKnown RBP11.13□□□□□ -0.63
GRN-216ENST00000589923 TBXAS1P24557 533 aaPredicted RBP11.13□□□□□ -0.63
GRN-216ENST00000589923 YWHAEP62258 255 aaKnown RBP11.13□□□□□ -0.63
GRN-216ENST00000589923 SULT2A1Q06520 285 aa11.13□□□□□ -0.63
GRN-216ENST00000589923 SRSF6Q13247 344 aaKnown RBP11.13□□□□□ -0.63
GRN-216ENST00000589923 CDKN3Q16667 212 aa11.13□□□□□ -0.63
GRN-216ENST00000589923 LINC00303Q3SY05 128 aa11.13□□□□□ -0.63
GRN-216ENST00000589923 ARTNQ5T4W7 220 aa11.13□□□□□ -0.63
GRN-216ENST00000589923 FAM46CQ5VWP2 391 aa11.13□□□□□ -0.63
GRN-216ENST00000589923 ATL3Q6DD88 541 aa11.13□□□□□ -0.63
GRN-216ENST00000589923 DENND1BQ6P3S1 775 aa11.13□□□□□ -0.63
GRN-216ENST00000589923 KRBA2Q6ZNG9 492 aa11.13□□□□□ -0.63
GRN-216ENST00000589923 DSG4Q86SJ6 1040 aa11.13□□□□□ -0.63
GRN-216ENST00000589923 CLEC14AQ86T13 490 aa11.13□□□□□ -0.63
GRN-216ENST00000589923 ARHGEF19Q8IW93 802 aa11.13□□□□□ -0.63
GRN-216ENST00000589923 CCDC117Q8IWD4 279 aaPredicted RBP11.13□□□□□ -0.63
GRN-216ENST00000589923 CHST14Q8NCH0 376 aa11.13□□□□□ -0.63
GRN-216ENST00000589923 OR2A12Q8NGT7 310 aa11.13□□□□□ -0.63
GRN-216ENST00000589923 DNAJC28Q9NX36 388 aa11.13□□□□□ -0.63
GRN-216ENST00000589923 PNMA8BQ9ULN7 279 aaPredicted RBP11.13□□□□□ -0.63
GRN-216ENST00000589923 PCDHB4Q9Y5E5 795 aa11.13□□□□□ -0.63
GRN-216ENST00000589923 PCDHGA8Q9Y5G5 932 aa11.13□□□□□ -0.63
GRN-216ENST00000589923 LRRK2Q5S007 2527 aa11.12□□□□□ -0.63
GRN-216ENST00000589923 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.12□□□□□ -0.63
GRN-216ENST00000589923 E5RJQ4 531 aa11.12□□□□□ -0.63
GRN-216ENST00000589923 I6L893 689 aaPredicted RBP11.12□□□□□ -0.63
GRN-216ENST00000589923 CETN3O15182 167 aa11.12□□□□□ -0.63
GRN-216ENST00000589923 SPINT1O43278 529 aa11.12□□□□□ -0.63
GRN-216ENST00000589923 SMAD6O43541 496 aaKnown RBP11.12□□□□□ -0.63
GRN-216ENST00000589923 BNIP3LO60238 219 aa11.12□□□□□ -0.63
GRN-216ENST00000589923 SNAP91O60641 907 aa11.12□□□□□ -0.63
GRN-216ENST00000589923 ZNF821O75541 412 aaPredicted RBP11.12□□□□□ -0.63
GRN-216ENST00000589923 NME1P15531 152 aaKnown RBP11.12□□□□□ -0.63
GRN-216ENST00000589923 CLCN1P35523 988 aa11.12□□□□□ -0.63
GRN-216ENST00000589923 NNMTP40261 264 aa11.12□□□□□ -0.63
GRN-216ENST00000589923 PRCPP42785 496 aa11.12□□□□□ -0.63
GRN-216ENST00000589923 SYKP43405 635 aa11.12□□□□□ -0.63
GRN-216ENST00000589923 FMO5P49326 533 aa11.12□□□□□ -0.63
GRN-216ENST00000589923 CSRP3P50461 194 aa11.12□□□□□ -0.63
GRN-216ENST00000589923 NFKB2Q00653 900 aa11.12□□□□□ -0.63
GRN-216ENST00000589923 ZNF177Q13360 481 aaPredicted RBP11.12□□□□□ -0.63
GRN-216ENST00000589923 ARL13BQ3SXY8 428 aa11.12□□□□□ -0.63
GRN-216ENST00000589923 ACCSLQ4AC99 568 aa11.12□□□□□ -0.63
GRN-216ENST00000589923 OTUD1Q5VV17 481 aaPredicted RBP11.12□□□□□ -0.63
GRN-216ENST00000589923 ANKRD40Q6AI12 368 aa11.12□□□□□ -0.63
GRN-216ENST00000589923 ZCCHC8Q6NZY4 707 aaKnown RBP11.12□□□□□ -0.63
GRN-216ENST00000589923 Q6ZSR6 202 aa11.12□□□□□ -0.63
GRN-216ENST00000589923 EFL1Q7Z2Z2 1120 aaKnown RBP11.12□□□□□ -0.63
GRN-216ENST00000589923 PRICKLE2Q7Z3G6 844 aa11.12□□□□□ -0.63
GRN-216ENST00000589923 C14orf80Q86SX3 495 aa11.12□□□□□ -0.63
GRN-216ENST00000589923 LURAP1LQ8IV03 231 aa11.12□□□□□ -0.63
GRN-216ENST00000589923 VOPP1Q96AW1 172 aa11.12□□□□□ -0.63
GRN-216ENST00000589923 IFT43Q96FT9 208 aa11.12□□□□□ -0.63
GRN-216ENST00000589923 KREMEN1Q96MU8 473 aa11.12□□□□□ -0.63
GRN-216ENST00000589923 SLC4A5Q9BY07 1137 aa11.12□□□□□ -0.63
GRN-216ENST00000589923 GRPEL1Q9HAV7 217 aa11.12□□□□□ -0.63
GRN-216ENST00000589923 USP29Q9HBJ7 922 aa11.12□□□□□ -0.63
GRN-216ENST00000589923 ANLNQ9NQW6 1124 aa11.12□□□□□ -0.63
GRN-216ENST00000589923 SLC25A13Q9UJS0 675 aa11.12□□□□□ -0.63
GRN-216ENST00000589923 HS3ST2Q9Y278 367 aa11.12□□□□□ -0.63
GRN-216ENST00000589923 SPTY2D1-AS1A0A0U1RR47 76 aa11.11□□□□□ -0.63
GRN-216ENST00000589923 EME2A4GXA9 379 aaPredicted RBP11.11□□□□□ -0.63
GRN-216ENST00000589923 A6NNZ2 444 aa11.11□□□□□ -0.63
GRN-216ENST00000589923 KPNA3O00505 521 aaPredicted RBP11.11□□□□□ -0.63
GRN-216ENST00000589923 CSF2P04141 144 aa11.11□□□□□ -0.63
GRN-216ENST00000589923 ALPPL2P10696 532 aa11.11□□□□□ -0.63
GRN-216ENST00000589923 ITGB6P18564 788 aa11.11□□□□□ -0.63
GRN-216ENST00000589923 RRM1P23921 792 aa11.11□□□□□ -0.63
GRN-216ENST00000589923 AKT2P31751 481 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms